| CHCHD4 | Q8N4Q1 | AC009977.1-201 | ENST00000586015 | 570 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AC103710.2-201 | ENST00000609912 | 942 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | C8orf59-209 | ENST00000612977 | 586 nt | APPRIS P1 TSL 2 BASIC | 2.51 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | USP12-203 | ENST00000620323 | 349 nt | TSL 3 BASIC | 2.51 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | DNAH7-201 | ENST00000312428 | 12394 nt | APPRIS P1 TSL 1 (best) BASIC | 2.51 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AC006020.1-201 | ENST00000420179 | 1854 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | ANKRD20A17P-201 | ENST00000511745 | 1330 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | HSPE1P11-201 | ENST00000339579 | 310 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | RNA5SP456-201 | ENST00000364002 | 114 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | RNY4P34-201 | ENST00000364779 | 95 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | RNY3P10-201 | ENST00000384764 | 102 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | MIR27B-201 | ENST00000385129 | 97 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | MIR561-201 | ENST00000385216 | 97 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | RNU6ATAC16P-201 | ENST00000408591 | 138 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AL356361.2-201 | ENST00000430542 | 443 nt | TSL 3 BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AC091153.2-202 | ENST00000441700 | 384 nt | TSL 3 BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | RN7SL636P-201 | ENST00000497504 | 294 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AC109927.2-201 | ENST00000506416 | 303 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | VCAN-AS1-201 | ENST00000512090 | 424 nt | TSL 3 BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AC091887.1-201 | ENST00000514002 | 439 nt | TSL 5 BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | RN7SKP24-201 | ENST00000515888 | 284 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | SNORA48.11-201 | ENST00000517015 | 89 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | FAM92A1P1-201 | ENST00000528023 | 890 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | RANP3-201 | ENST00000530970 | 276 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | OSBPL9P5-201 | ENST00000542581 | 171 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | POC1B-211 | ENST00000549504 | 581 nt | TSL 5 BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AC137800.2-201 | ENST00000574375 | 120 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | MIR3682-201 | ENST00000581338 | 84 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AC023394.2-201 | ENST00000581987 | 792 nt | TSL 5 BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AC012594.1-269 | ENST00000600489 | 628 nt | TSL 5 BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AL353997.5-201 | ENST00000618886 | 171 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | U4.3-201 | ENST00000621047 | 82 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | RGS13-201 | ENST00000391995 | 1505 nt | APPRIS P1 TSL 1 (best) BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AC011124.2-201 | ENST00000518739 | 3222 nt | TSL 1 (best) BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | ZNF470-202 | ENST00000391709 | 6601 nt | APPRIS P1 TSL 5 BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | CACNB4-238 | ENST00000636901 | 7706 nt | TSL 5 BASIC | 2.5 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | ZMYM1-203 | ENST00000373330 | 4203 nt | APPRIS P1 TSL 1 (best) BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | PCM1-222 | ENST00000524226 | 5955 nt | TSL 1 (best) BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | OR8K3-204 | ENST00000641689 | 2380 nt | APPRIS P1 BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AC073343.1-201 | ENST00000328239 | 651 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | RNU5E-1-201 | ENST00000362477 | 120 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | Y_RNA.33-201 | ENST00000362591 | 102 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | RNU6-946P-201 | ENST00000383878 | 107 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | CYCSP46-201 | ENST00000423569 | 204 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AL354936.1-201 | ENST00000441521 | 649 nt | TSL 5 BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | CACYBPP2-201 | ENST00000453625 | 678 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | snoU109.1-201 | ENST00000459339 | 135 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | MTND4P2-201 | ENST00000507767 | 1203 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AC108727.1-201 | ENST00000513802 | 393 nt | TSL 2 BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AP002453.2-201 | ENST00000533503 | 320 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AC243972.3-201 | ENST00000539655 | 198 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AC005357.2-201 | ENST00000586473 | 583 nt | TSL 2 BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AL133173.2-201 | ENST00000614270 | 90 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AL162373.1-201 | ENST00000620433 | 407 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | SDR42E1P4-201 | ENST00000620894 | 481 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AC110994.2-201 | ENST00000635481 | 492 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | CSNK1G3-202 | ENST00000360683 | 4047 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | LCORL-202 | ENST00000382224 | 4984 nt | APPRIS ALT2 TSL 5 BASIC | 2.49 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | OR6C76-201 | ENST00000328314 | 939 nt | APPRIS P1 BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | Y_RNA.164-201 | ENST00000363709 | 102 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | RNU6-960P-201 | ENST00000364056 | 120 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | SNORA4.3-201 | ENST00000365564 | 137 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | RNU6-395P-201 | ENST00000365662 | 106 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | OR51A4-201 | ENST00000380373 | 1002 nt | APPRIS P1 BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | RNU6-641P-201 | ENST00000384006 | 107 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | RNU6-166P-201 | ENST00000384371 | 107 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | SNORA40.3-201 | ENST00000390964 | 122 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AL133475.1-201 | ENST00000404414 | 305 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | HMGN1P14-201 | ENST00000412459 | 517 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | USP9YP20-201 | ENST00000419224 | 558 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AL512656.1-201 | ENST00000427492 | 401 nt | TSL 2 BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | MTND1P26-201 | ENST00000440488 | 538 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | LINC01628-201 | ENST00000444266 | 397 nt | TSL 2 BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | TAF9P1-201 | ENST00000445421 | 515 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | LINC01758-201 | ENST00000448001 | 458 nt | TSL 3 BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AL138900.1-201 | ENST00000449345 | 399 nt | TSL 3 BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | LINC01813-201 | ENST00000451034 | 712 nt | TSL 1 (best) BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | TAF9P2-201 | ENST00000454958 | 515 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | RPL7P43-201 | ENST00000478876 | 753 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AC092608.1-201 | ENST00000503505 | 267 nt | TSL 2 BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | FAM92A1P2-202 | ENST00000504766 | 877 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AC093206.1-201 | ENST00000515364 | 497 nt | TSL 3 BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | RNA5SP458-201 | ENST00000516188 | 119 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AC021785.1-201 | ENST00000520780 | 453 nt | TSL 3 BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AP003122.4-201 | ENST00000530980 | 758 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | OR11H5P-201 | ENST00000554039 | 926 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AL713866.2-201 | ENST00000603579 | 219 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AC121247.2-201 | ENST00000604776 | 136 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AL158032.1-201 | ENST00000605401 | 106 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | ZRANB2-AS2-218 | ENST00000608360 | 722 nt | TSL 5 BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AC130324.3-201 | ENST00000614165 | 542 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AC019226.2-201 | ENST00000625973 | 424 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | AC099654.13-201 | ENST00000639774 | 207 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | C5orf46-201 | ENST00000318315 | 506 nt | APPRIS P2 TSL 1 (best) BASIC | 2.47 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | DEFB107A-201 | ENST00000335021 | 389 nt | APPRIS P1 TSL 1 (best) BASIC | 2.47 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | DEFB107B-201 | ENST00000355602 | 389 nt | APPRIS P1 TSL 1 (best) BASIC | 2.47 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | TSHB-202 | ENST00000369517 | 474 nt | APPRIS P1 TSL 1 (best) BASIC | 2.47 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | SNORA20.2-201 | ENST00000383922 | 131 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | RNY3P9-201 | ENST00000384727 | 106 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| CHCHD4 | Q8N4Q1 | RPL23AP32-201 | ENST00000395315 | 459 nt | BASIC | 2.47 | □□□□□ -2.01 | | |