Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RPL30P12-201ENST00000474666 353 ntBASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 RPS4XP13-201ENST00000483219 789 ntBASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 RNU2-58P-201ENST00000516403 183 ntBASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 SNORD19.2-201ENST00000516978 73 ntBASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 AC018448.1-201ENST00000552843 316 ntBASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 RPL21P9-201ENST00000556149 474 ntBASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 CYP4A27P-201ENST00000567218 190 ntBASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 AC092435.4-201ENST00000623012 4159 ntBASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 AF117829.1-206ENST00000621883 3802 ntBASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 RPL23P2-201ENST00000320371 421 ntBASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 SNORA72.2-201ENST00000365028 127 ntBASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 RNU1-64P-201ENST00000365443 163 ntBASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 RNU6-1310P-201ENST00000384153 107 ntBASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 RNU6-793P-201ENST00000384233 104 ntBASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 MIR765-201ENST00000390226 114 ntBASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 MIR320B2-201ENST00000408479 138 ntBASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 AL160275.2-201ENST00000412010 394 ntBASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 AC138623.1-201ENST00000418060 216 ntBASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 AL591419.1-201ENST00000427423 339 ntBASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 AC005300.1-201ENST00000428401 373 ntBASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 RNA5SP310-201ENST00000459084 116 ntBASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 RN7SL443P-201ENST00000464331 290 ntBASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 RN7SL97P-201ENST00000486780 299 ntBASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 AC022559.1-201ENST00000520905 205 ntBASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 MAPK10-286ENST00000641208 8747 ntBASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 AC002546.1-201ENST00000588041 2504 ntBASIC4.61□□□□□ -1.67
DEPDC4Q8N2C3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 AC135776.4-201ENST00000624300 1904 ntBASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 AC004944.1-201ENST00000517807 3059 ntBASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 ZNF204P-201ENST00000416749 2397 ntBASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 RNU1-62P-201ENST00000362599 164 ntBASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 Y_RNA.170-201ENST00000363746 110 ntBASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 RN7SKP103-201ENST00000363848 320 ntBASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 RNU4-56P-201ENST00000364700 142 ntBASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 AL592291.1-201ENST00000403830 352 ntBASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 AL161651.1-201ENST00000440882 223 ntBASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 HMGN2P16-201ENST00000456802 261 ntBASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 AC090525.1-201ENST00000479116 478 ntBASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 RPL32P34-201ENST00000486380 400 ntBASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 AC134698.5-201ENST00000519444 336 ntBASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 MIR4646-201ENST00000580775 63 ntBASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 AC024220.1-201ENST00000603675 484 ntBASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 RNU6-91P-201ENST00000607774 107 ntBASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 AC008725.1-201ENST00000605123 2263 ntBASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 AL353746.1-201ENST00000566293 6881 ntBASIC4.6□□□□□ -1.67
DEPDC4Q8N2C3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
DEPDC4Q8N2C3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
DEPDC4Q8N2C3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
DEPDC4Q8N2C3 RNA5SP305-201ENST00000362665 119 ntBASIC4.59□□□□□ -1.67
DEPDC4Q8N2C3 SNORD50.2-201ENST00000365465 70 ntBASIC4.59□□□□□ -1.67
DEPDC4Q8N2C3 Y_RNA.597-201ENST00000410463 100 ntBASIC4.59□□□□□ -1.67
DEPDC4Q8N2C3 EIF4HP2-201ENST00000424380 563 ntBASIC4.59□□□□□ -1.67
DEPDC4Q8N2C3 RPL23AP82-202ENST00000427528 469 ntBASIC4.59□□□□□ -1.67
DEPDC4Q8N2C3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.59□□□□□ -1.67
DEPDC4Q8N2C3 RPL23AP3-201ENST00000453844 468 ntBASIC4.59□□□□□ -1.67
DEPDC4Q8N2C3 RN7SL222P-201ENST00000476452 299 ntBASIC4.59□□□□□ -1.67
DEPDC4Q8N2C3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.59□□□□□ -1.67
DEPDC4Q8N2C3 SNORA31.16-201ENST00000516773 139 ntBASIC4.59□□□□□ -1.67
DEPDC4Q8N2C3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.59□□□□□ -1.67
DEPDC4Q8N2C3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.59□□□□□ -1.67
DEPDC4Q8N2C3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.59□□□□□ -1.67
DEPDC4Q8N2C3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.59□□□□□ -1.67
DEPDC4Q8N2C3 AC021753.1-201ENST00000635724 168 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms