Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC65Q8IXS2 AL022154.1-201ENST00000604698 785 ntBASIC2.08□□□□□ -2.08
CCDC65Q8IXS2 AC069294.1-201ENST00000608397 350 ntBASIC2.08□□□□□ -2.08
CCDC65Q8IXS2 AC005296.1-201ENST00000616145 209 ntBASIC2.08□□□□□ -2.08
CCDC65Q8IXS2 AC009233.1-201ENST00000616477 371 ntBASIC2.08□□□□□ -2.08
CCDC65Q8IXS2 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC65Q8IXS2 MTND5P30-201ENST00000452896 1731 ntBASIC2.08□□□□□ -2.08
CCDC65Q8IXS2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC65Q8IXS2 AC103710.2-202ENST00000641454 2853 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 AL512604.1-201ENST00000404812 257 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 Z99497.1-201ENST00000421282 135 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 AL445685.2-201ENST00000422551 342 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 RPL31P63-201ENST00000422565 375 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 RPL23AP30-201ENST00000432419 501 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 USP9YP15-201ENST00000442391 422 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 AL078601.1-201ENST00000444542 271 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 TAF9P1-201ENST00000445421 515 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 KATNBL1P6-201ENST00000453433 915 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 TAF9P2-201ENST00000454958 515 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 RNU7-125P-201ENST00000458760 62 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 RNU7-51P-201ENST00000516560 62 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 AP000889.1-201ENST00000530968 660 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 RANP3-201ENST00000530970 276 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 CBX3P7-201ENST00000532876 502 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 AC025678.1-201ENST00000567861 338 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 AC090897.2-201ENST00000581715 130 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 AC112191.3-201ENST00000604371 277 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 AL359999.1-201ENST00000604513 294 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 AL360219.1-201ENST00000610230 366 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 AC079248.2-201ENST00000623779 326 ntBASIC2.07□□□□□ -2.08
CCDC65Q8IXS2 AC009487.4-201ENST00000624969 3585 ntBASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 Y_RNA.22-201ENST00000362492 102 ntBASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 Y_RNA.33-201ENST00000362591 102 ntBASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 RNU6-1280P-201ENST00000365211 107 ntBASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 RNU6-190P-201ENST00000384154 102 ntBASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 MIR147B-201ENST00000390185 80 ntBASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 RNA5SP489-201ENST00000410986 109 ntBASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 AC016831.2-201ENST00000417179 352 ntBASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 AIMP1P2-201ENST00000425294 312 ntBASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 AC068781.1-201ENST00000488231 618 ntBASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 RNU6-759P-201ENST00000516740 103 ntBASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 RNU6-1220P-201ENST00000517126 108 ntBASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 AC135279.1-201ENST00000543493 504 ntBASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 AC008015.1-201ENST00000555505 465 ntBASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 AC012213.3-201ENST00000577199 777 ntBASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 AC012065.4-201ENST00000602445 679 ntBASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 AC013412.1-201ENST00000610687 192 ntBASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 AC008555.8-201ENST00000623602 2168 ntBASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC65Q8IXS2 SNORD114-1-201ENST00000362705 72 ntBASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 SNORD3E-201ENST00000362899 217 ntBASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 RNU6-486P-201ENST00000363116 107 ntBASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 RNU6-553P-201ENST00000364047 96 ntBASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 SNORA16.1-201ENST00000364597 132 ntBASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 FTH1P15-201ENST00000406984 280 ntBASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 HMGN2P19-201ENST00000425149 265 ntBASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 USP9YP12-201ENST00000450481 570 ntBASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 AC107393.1-201ENST00000512403 346 ntBASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 MRPS33P3-201ENST00000513456 322 ntBASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 SMURF2P1-201ENST00000514992 481 ntBASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 FABP5P5-201ENST00000515537 406 ntBASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 SNORA25.11-201ENST00000515935 105 ntBASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 AC079598.5-201ENST00000547460 117 ntBASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 MIR3122-201ENST00000577243 73 ntBASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 MIR4529-201ENST00000578110 78 ntBASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 AC009977.1-201ENST00000586015 570 ntBASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 AC005034.5-201ENST00000604219 466 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms