Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC090740.1-201ENST00000623193 2262 ntBASIC4.84□□□□□ -1.64
TRIM50Q86XT4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
TRIM50Q86XT4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.84□□□□□ -1.64
TRIM50Q86XT4 SRP72P2-201ENST00000344851 1979 ntBASIC4.84□□□□□ -1.64
TRIM50Q86XT4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM50Q86XT4 MFSD8-242ENST00000641690 4199 ntBASIC4.83□□□□□ -1.64
TRIM50Q86XT4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM50Q86XT4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM50Q86XT4 MIR372-201ENST00000362225 67 ntBASIC4.83□□□□□ -1.64
TRIM50Q86XT4 Y_RNA.319-201ENST00000365138 92 ntBASIC4.83□□□□□ -1.64
TRIM50Q86XT4 RNU1-100P-201ENST00000365255 165 ntBASIC4.83□□□□□ -1.64
TRIM50Q86XT4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM50Q86XT4 RNU6-378P-201ENST00000384324 107 ntBASIC4.83□□□□□ -1.64
TRIM50Q86XT4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM50Q86XT4 AL157831.1-201ENST00000426134 473 ntBASIC4.83□□□□□ -1.64
TRIM50Q86XT4 AC096638.1-201ENST00000444678 216 ntBASIC4.83□□□□□ -1.64
TRIM50Q86XT4 AC125238.1-201ENST00000448842 249 ntBASIC4.83□□□□□ -1.64
TRIM50Q86XT4 HMGB3P8-201ENST00000449709 577 ntBASIC4.83□□□□□ -1.64
TRIM50Q86XT4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM50Q86XT4 RNU7-120P-201ENST00000459334 63 ntBASIC4.83□□□□□ -1.64
TRIM50Q86XT4 RPL23AP65-201ENST00000475608 468 ntBASIC4.83□□□□□ -1.64
TRIM50Q86XT4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM50Q86XT4 AC087441.2-201ENST00000529141 262 ntBASIC4.83□□□□□ -1.64
TRIM50Q86XT4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM50Q86XT4 AC027288.2-201ENST00000553028 243 ntBASIC4.83□□□□□ -1.64
TRIM50Q86XT4 UBL5P4-201ENST00000562584 236 ntBASIC4.83□□□□□ -1.64
TRIM50Q86XT4 RN7SL600P-201ENST00000581811 299 ntBASIC4.83□□□□□ -1.64
TRIM50Q86XT4 AC019159.1-201ENST00000605094 187 ntBASIC4.83□□□□□ -1.64
TRIM50Q86XT4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM50Q86XT4 MIR8059-201ENST00000620427 81 ntBASIC4.83□□□□□ -1.64
TRIM50Q86XT4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM50Q86XT4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM50Q86XT4 MIR492-201ENST00000638676 116 ntBASIC4.83□□□□□ -1.64
TRIM50Q86XT4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM50Q86XT4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM50Q86XT4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM50Q86XT4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM50Q86XT4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.83□□□□□ -1.64
TRIM50Q86XT4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM50Q86XT4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM50Q86XT4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM50Q86XT4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
TRIM50Q86XT4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM50Q86XT4 AC006971.1-201ENST00000407916 4486 ntBASIC4.82□□□□□ -1.64
TRIM50Q86XT4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM50Q86XT4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM50Q86XT4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
TRIM50Q86XT4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TRIM50Q86XT4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
TRIM50Q86XT4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM50Q86XT4 SPRR2C-201ENST00000290702 219 ntBASIC4.82□□□□□ -1.64
TRIM50Q86XT4 RNU6-740P-201ENST00000364734 105 ntBASIC4.82□□□□□ -1.64
TRIM50Q86XT4 RNU6-326P-201ENST00000365480 107 ntBASIC4.82□□□□□ -1.64
TRIM50Q86XT4 Y_RNA.464-201ENST00000384282 110 ntBASIC4.82□□□□□ -1.64
TRIM50Q86XT4 MIR487A-201ENST00000385009 80 ntBASIC4.82□□□□□ -1.64
TRIM50Q86XT4 MIR921-201ENST00000401133 56 ntBASIC4.82□□□□□ -1.64
TRIM50Q86XT4 RN7SKP167-201ENST00000411047 285 ntBASIC4.82□□□□□ -1.64
TRIM50Q86XT4 RNU5A-5P-201ENST00000411054 116 ntBASIC4.82□□□□□ -1.64
TRIM50Q86XT4 COX6B1P7-201ENST00000430845 235 ntBASIC4.82□□□□□ -1.64
TRIM50Q86XT4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM50Q86XT4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM50Q86XT4 RN7SL812P-201ENST00000493791 279 ntBASIC4.82□□□□□ -1.64
TRIM50Q86XT4 RNU6-255P-201ENST00000516957 105 ntBASIC4.82□□□□□ -1.64
TRIM50Q86XT4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM50Q86XT4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.82□□□□□ -1.64
TRIM50Q86XT4 MIR3133-201ENST00000583157 78 ntBASIC4.82□□□□□ -1.64
TRIM50Q86XT4 AC007546.2-201ENST00000623996 360 ntBASIC4.82□□□□□ -1.64
TRIM50Q86XT4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
TRIM50Q86XT4 AC092435.4-201ENST00000623012 4159 ntBASIC4.82□□□□□ -1.64
TRIM50Q86XT4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
TRIM50Q86XT4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM50Q86XT4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TRIM50Q86XT4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM50Q86XT4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
TRIM50Q86XT4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM50Q86XT4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TRIM50Q86XT4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TRIM50Q86XT4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM50Q86XT4 RNU6-50P-201ENST00000362356 103 ntBASIC4.81□□□□□ -1.64
TRIM50Q86XT4 RNU1-14P-201ENST00000362759 152 ntBASIC4.81□□□□□ -1.64
TRIM50Q86XT4 RNU5B-2P-201ENST00000363036 113 ntBASIC4.81□□□□□ -1.64
TRIM50Q86XT4 RNA5SP175-201ENST00000364275 119 ntBASIC4.81□□□□□ -1.64
TRIM50Q86XT4 RNU6-187P-201ENST00000384139 106 ntBASIC4.81□□□□□ -1.64
TRIM50Q86XT4 RNU6-662P-201ENST00000384253 104 ntBASIC4.81□□□□□ -1.64
TRIM50Q86XT4 Y_RNA.569-201ENST00000384749 103 ntBASIC4.81□□□□□ -1.64
TRIM50Q86XT4 MIR544A-201ENST00000384855 91 ntBASIC4.81□□□□□ -1.64
TRIM50Q86XT4 MIR10B-201ENST00000385011 110 ntBASIC4.81□□□□□ -1.64
TRIM50Q86XT4 RNU6-493P-201ENST00000391321 108 ntBASIC4.81□□□□□ -1.64
TRIM50Q86XT4 MTHFD2P2-201ENST00000407725 247 ntBASIC4.81□□□□□ -1.64
TRIM50Q86XT4 RNU6-1001P-201ENST00000411265 100 ntBASIC4.81□□□□□ -1.64
TRIM50Q86XT4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM50Q86XT4 AC074117.2-201ENST00000417130 397 ntBASIC4.81□□□□□ -1.64
TRIM50Q86XT4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM50Q86XT4 RPL23AP95-201ENST00000426806 265 ntBASIC4.81□□□□□ -1.64
TRIM50Q86XT4 AC073901.1-201ENST00000462471 408 ntBASIC4.81□□□□□ -1.64
TRIM50Q86XT4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.81□□□□□ -1.64
TRIM50Q86XT4 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.81□□□□□ -1.64
TRIM50Q86XT4 HSPE1P4-201ENST00000550617 308 ntBASIC4.81□□□□□ -1.64
TRIM50Q86XT4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM50Q86XT4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms