Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 AC093648.1-201ENST00000623546 606 ntBASIC1.58□□□□□ -2.16
MRPL55Q7Z7F7 AC005336.3-201ENST00000623833 2679 ntBASIC1.58□□□□□ -2.16
MRPL55Q7Z7F7 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
MRPL55Q7Z7F7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
MRPL55Q7Z7F7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 AL365361.1-201ENST00000566942 3481 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 MIR208A-201ENST00000362287 71 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 U8.3-201ENST00000363321 132 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 RNU5F-7P-201ENST00000363696 115 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 RNU6-1210P-201ENST00000363775 107 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 U8.8-201ENST00000365399 135 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 SNORA20.2-201ENST00000383922 131 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 MIR196B-201ENST00000384852 84 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 MIR27B-201ENST00000385129 97 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 RNU2-3P-201ENST00000410144 191 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 Y_RNA.598-201ENST00000410480 95 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 RNU2-32P-201ENST00000411193 191 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 AC096664.2-201ENST00000411843 406 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 HIGD1AP15-201ENST00000416198 280 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 MTND1P23-201ENST00000416931 372 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 AL158823.1-201ENST00000418441 478 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 COTL1P1-201ENST00000422309 375 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 snoU109.1-201ENST00000459339 135 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 RPL30P6-201ENST00000475925 342 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 AC109486.1-201ENST00000486833 374 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 MTCYBP40-201ENST00000509390 1135 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 AC112673.1-201ENST00000513168 575 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 RN7SKP256-201ENST00000517201 314 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 AC090572.1-201ENST00000519251 160 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 RPL7P20-201ENST00000520308 745 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 GTF3AP2-201ENST00000557014 266 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 AC022022.2-201ENST00000602989 360 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 AL353778.1-201ENST00000603149 408 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 OR2AS2P-201ENST00000606902 342 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 AL773524.1-201ENST00000614065 229 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 AC131159.1-201ENST00000621854 213 ntBASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MRPL55Q7Z7F7 RNU6-611P-201ENST00000384276 104 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 Y_RNA.576-201ENST00000384781 102 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 SNORA40.19-201ENST00000390846 128 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 SNORA48.2-201ENST00000390926 124 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 AC010099.3-201ENST00000423896 409 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 USP9YP18-201ENST00000425912 695 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 HMGB1P31-201ENST00000437242 427 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 DNAJC19P4-201ENST00000440115 345 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 AC007969.2-201ENST00000441891 191 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 AC012308.1-201ENST00000451232 178 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 MTCYBP1-201ENST00000454315 1119 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 PRELID3BP1-201ENST00000457142 540 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 AC126389.1-201ENST00000477436 290 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 RPS27P27-201ENST00000498779 255 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 AC097462.2-201ENST00000504623 481 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 MTND3P25-201ENST00000509243 135 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 RN7SKP24-201ENST00000515888 284 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 AC018630.3-201ENST00000542637 96 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 AC002984.1-201ENST00000591692 448 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 AC078795.2-201ENST00000602835 1252 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 AC092354.1-201ENST00000606057 376 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 MIR7106-201ENST00000612419 65 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 AC090517.3-201ENST00000625170 141 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 MTND4P4-201ENST00000439033 1366 ntBASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
MRPL55Q7Z7F7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
MRPL55Q7Z7F7 RNU6-78P-201ENST00000362897 107 ntBASIC1.55□□□□□ -2.16
MRPL55Q7Z7F7 SNORD56.1-201ENST00000362913 68 ntBASIC1.55□□□□□ -2.16
MRPL55Q7Z7F7 Y_RNA.333-201ENST00000365274 102 ntBASIC1.55□□□□□ -2.16
MRPL55Q7Z7F7 SNORD115-7-201ENST00000365306 82 ntBASIC1.55□□□□□ -2.16
MRPL55Q7Z7F7 RNU6-546P-201ENST00000383991 107 ntBASIC1.55□□□□□ -2.16
MRPL55Q7Z7F7 SNORA8-201ENST00000384574 139 ntBASIC1.55□□□□□ -2.16
MRPL55Q7Z7F7 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.55□□□□□ -2.16
MRPL55Q7Z7F7 CYCSP33-201ENST00000414485 327 ntBASIC1.55□□□□□ -2.16
MRPL55Q7Z7F7 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.55□□□□□ -2.16
MRPL55Q7Z7F7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms