Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.84□□□□□ -1.95
SHFQ7M4L6 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.84□□□□□ -1.95
SHFQ7M4L6 MTCO1P29-201ENST00000496868 288 ntBASIC2.84□□□□□ -1.95
SHFQ7M4L6 AC026801.1-201ENST00000497178 464 ntBASIC2.84□□□□□ -1.95
SHFQ7M4L6 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.84□□□□□ -1.95
SHFQ7M4L6 AC092436.3-201ENST00000511788 257 ntBASIC2.84□□□□□ -1.95
SHFQ7M4L6 Y_RNA.687-201ENST00000516558 91 ntBASIC2.84□□□□□ -1.95
SHFQ7M4L6 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SHFQ7M4L6 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.84□□□□□ -1.95
SHFQ7M4L6 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.84□□□□□ -1.95
SHFQ7M4L6 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.84□□□□□ -1.95
SHFQ7M4L6 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.84□□□□□ -1.95
SHFQ7M4L6 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.84□□□□□ -1.95
SHFQ7M4L6 OR1M4P-201ENST00000589199 287 ntBASIC2.84□□□□□ -1.95
SHFQ7M4L6 U3.45-201ENST00000607547 219 ntBASIC2.84□□□□□ -1.95
SHFQ7M4L6 uc_338.25-201ENST00000613756 156 ntBASIC2.84□□□□□ -1.95
SHFQ7M4L6 AL355365.1-201ENST00000616480 294 ntBASIC2.84□□□□□ -1.95
SHFQ7M4L6 AL359314.1-201ENST00000616913 261 ntBASIC2.84□□□□□ -1.95
SHFQ7M4L6 MIR6134-201ENST00000617606 109 ntBASIC2.84□□□□□ -1.95
SHFQ7M4L6 AC138627.2-201ENST00000624202 601 ntBASIC2.84□□□□□ -1.95
SHFQ7M4L6 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.84□□□□□ -1.95
SHFQ7M4L6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.84□□□□□ -1.95
SHFQ7M4L6 AL353743.1-202ENST00000431724 1695 ntBASIC2.84□□□□□ -1.95
SHFQ7M4L6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SHFQ7M4L6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
SHFQ7M4L6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.96
SHFQ7M4L6 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SHFQ7M4L6 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SHFQ7M4L6 RNU6-562P-201ENST00000362731 107 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.83□□□□□ -1.96
SHFQ7M4L6 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SHFQ7M4L6 Y_RNA.509-201ENST00000384506 99 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 SNORA26.7-201ENST00000391288 122 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 MIR548F5-201ENST00000408421 86 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.83□□□□□ -1.96
SHFQ7M4L6 SNORD56-201ENST00000413522 71 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.83□□□□□ -1.96
SHFQ7M4L6 NCOR1P3-201ENST00000420479 303 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.83□□□□□ -1.96
SHFQ7M4L6 AL139281.1-201ENST00000422120 335 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.83□□□□□ -1.96
SHFQ7M4L6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.83□□□□□ -1.96
SHFQ7M4L6 MTND1P17-201ENST00000448961 204 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.83□□□□□ -1.96
SHFQ7M4L6 RPS26P21-201ENST00000475397 348 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 RN7SL499P-201ENST00000481141 276 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 MTND5P5-201ENST00000503764 376 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 SNORA31.26-201ENST00000517250 137 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.83□□□□□ -1.96
SHFQ7M4L6 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.83□□□□□ -1.96
SHFQ7M4L6 AC093027.1-201ENST00000546698 429 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.83□□□□□ -1.96
SHFQ7M4L6 AC106785.1-201ENST00000565935 262 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 MIR4790-201ENST00000577799 79 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.83□□□□□ -1.96
SHFQ7M4L6 AC100830.2-201ENST00000581636 240 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 MIR3922-201ENST00000585192 84 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 AL451007.1-201ENST00000595491 289 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 ELOCP5-201ENST00000604924 333 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 AL627309.6-201ENST00000606857 840 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 AC069234.5-201ENST00000611056 416 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 MIR1302-1-201ENST00000637932 143 ntBASIC2.83□□□□□ -1.96
SHFQ7M4L6 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.83□□□□□ -1.96
SHFQ7M4L6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.82□□□□□ -1.96
SHFQ7M4L6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
SHFQ7M4L6 AC110491.1-201ENST00000562191 2010 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.82□□□□□ -1.96
SHFQ7M4L6 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHFQ7M4L6 RNA5SP479-201ENST00000364858 117 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 RNU6-1329P-201ENST00000365664 107 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 RNU6-214P-201ENST00000384130 107 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SHFQ7M4L6 AL360182.1-201ENST00000397433 468 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHFQ7M4L6 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.82□□□□□ -1.96
SHFQ7M4L6 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.82□□□□□ -1.96
SHFQ7M4L6 TOMM20P4-201ENST00000427861 435 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 HMGN2P20-201ENST00000437531 273 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 RPL21P2-201ENST00000440049 481 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 RPS12P18-201ENST00000442381 270 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.82□□□□□ -1.96
SHFQ7M4L6 HMGN2P10-201ENST00000448085 265 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.82□□□□□ -1.96
SHFQ7M4L6 AL031183.1-201ENST00000457667 207 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 AC128713.1-201ENST00000471495 306 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SHFQ7M4L6 RPL23AP45-201ENST00000476406 468 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 HMGN2P13-201ENST00000476476 274 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.82□□□□□ -1.96
SHFQ7M4L6 AC110794.1-201ENST00000505816 425 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.82□□□□□ -1.96
SHFQ7M4L6 RNU1-45P-201ENST00000517191 141 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 AC104576.1-201ENST00000524225 88 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.82□□□□□ -1.96
SHFQ7M4L6 AC026371.1-201ENST00000551867 419 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 NACAP3-201ENST00000552100 481 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 MIR4795-201ENST00000584182 89 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 POLR3GP2-201ENST00000588366 668 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 AC008121.1-201ENST00000603244 268 ntBASIC2.82□□□□□ -1.96
SHFQ7M4L6 AC245389.1-201ENST00000605141 529 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms