Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC-0.16□□□□□ -2.44
VPS13CQ709C8 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC-0.16□□□□□ -2.44
VPS13CQ709C8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC-0.16□□□□□ -2.44
VPS13CQ709C8 HMGB1P35-201ENST00000503360 598 ntBASIC-0.16□□□□□ -2.44
VPS13CQ709C8 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.16□□□□□ -2.44
VPS13CQ709C8 RNU5F-8P-201ENST00000515941 111 ntBASIC-0.16□□□□□ -2.44
VPS13CQ709C8 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.16□□□□□ -2.44
VPS13CQ709C8 AC021739.1-201ENST00000559631 174 ntBASIC-0.16□□□□□ -2.44
VPS13CQ709C8 MIR4290-201ENST00000583807 95 ntBASIC-0.16□□□□□ -2.44
VPS13CQ709C8 AC104465.1-201ENST00000611365 139 ntBASIC-0.16□□□□□ -2.44
VPS13CQ709C8 AL590410.1-201ENST00000617925 333 ntBASIC-0.16□□□□□ -2.44
VPS13CQ709C8 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.16□□□□□ -2.44
VPS13CQ709C8 RNU4-12P-201ENST00000365233 139 ntBASIC-0.17□□□□□ -2.44
VPS13CQ709C8 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC-0.17□□□□□ -2.44
VPS13CQ709C8 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC-0.17□□□□□ -2.44
VPS13CQ709C8 AC022690.1-201ENST00000526681 550 ntBASIC-0.17□□□□□ -2.44
VPS13CQ709C8 AC091805.2-201ENST00000603848 235 ntBASIC-0.17□□□□□ -2.44
VPS13CQ709C8 AC080013.4-201ENST00000607624 649 ntBASIC-0.17□□□□□ -2.44
VPS13CQ709C8 AL161629.2-201ENST00000615347 275 ntBASIC-0.17□□□□□ -2.44
VPS13CQ709C8 AL158163.2-201ENST00000619110 700 ntBASIC-0.17□□□□□ -2.44
VPS13CQ709C8 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC-0.17□□□□□ -2.44
VPS13CQ709C8 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC-0.17□□□□□ -2.44
VPS13CQ709C8 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
VPS13CQ709C8 CETN4P-201ENST00000432407 469 ntBASIC-0.17□□□□□ -2.44
VPS13CQ709C8 AC245047.7-201ENST00000440265 293 ntBASIC-0.17□□□□□ -2.44
VPS13CQ709C8 SNORA48.10-201ENST00000516965 160 ntBASIC-0.17□□□□□ -2.44
VPS13CQ709C8 AL138478.1-201ENST00000612252 832 ntBASIC-0.17□□□□□ -2.44
VPS13CQ709C8 AL079343.1-201ENST00000572358 1771 ntBASIC-0.17□□□□□ -2.44
VPS13CQ709C8 RNU6-546P-201ENST00000383991 107 ntBASIC-0.17□□□□□ -2.44
VPS13CQ709C8 DHFRP6-201ENST00000401776 268 ntBASIC-0.17□□□□□ -2.44
VPS13CQ709C8 RNU2-63P-201ENST00000410792 194 ntBASIC-0.17□□□□□ -2.44
VPS13CQ709C8 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC-0.17□□□□□ -2.44
VPS13CQ709C8 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC-0.17□□□□□ -2.44
VPS13CQ709C8 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC-0.17□□□□□ -2.44
VPS13CQ709C8 AL592221.1-201ENST00000605266 382 ntBASIC-0.17□□□□□ -2.44
VPS13CQ709C8 EIF4EP2-201ENST00000422816 654 ntBASIC-0.18□□□□□ -2.44
VPS13CQ709C8 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC-0.18□□□□□ -2.44
VPS13CQ709C8 AC023050.1-201ENST00000498198 304 ntBASIC-0.18□□□□□ -2.44
VPS13CQ709C8 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC-0.18□□□□□ -2.44
VPS13CQ709C8 HMGN2P15-201ENST00000585707 270 ntBASIC-0.18□□□□□ -2.44
VPS13CQ709C8 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC-0.18□□□□□ -2.44
VPS13CQ709C8 AC092757.1-201ENST00000467293 467 ntBASIC-0.18□□□□□ -2.44
VPS13CQ709C8 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC-0.18□□□□□ -2.44
VPS13CQ709C8 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC-0.18□□□□□ -2.44
VPS13CQ709C8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.18□□□□□ -2.44
VPS13CQ709C8 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.18□□□□□ -2.44
VPS13CQ709C8 RPL21P66-201ENST00000426566 466 ntBASIC-0.18□□□□□ -2.44
VPS13CQ709C8 CENPUP1-201ENST00000526649 1202 ntBASIC-0.18□□□□□ -2.44
VPS13CQ709C8 AC005832.3-201ENST00000537929 631 ntBASIC-0.18□□□□□ -2.44
VPS13CQ709C8 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC-0.18□□□□□ -2.44
VPS13CQ709C8 MIR4431-201ENST00000579990 94 ntBASIC-0.18□□□□□ -2.44
VPS13CQ709C8 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.19□□□□□ -2.44
VPS13CQ709C8 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC-0.19□□□□□ -2.44
VPS13CQ709C8 ZNF736P11Y-201ENST00000442535 1213 ntBASIC-0.19□□□□□ -2.44
VPS13CQ709C8 RN7SKP34-201ENST00000516142 244 ntBASIC-0.19□□□□□ -2.44
VPS13CQ709C8 AC087685.1-201ENST00000587507 141 ntBASIC-0.19□□□□□ -2.44
VPS13CQ709C8 AL590282.1-201ENST00000610379 1136 ntBASIC-0.19□□□□□ -2.44
VPS13CQ709C8 AC079395.3-201ENST00000615161 484 ntBASIC-0.19□□□□□ -2.44
VPS13CQ709C8 ZNF680P1-201ENST00000436625 1469 ntBASIC-0.19□□□□□ -2.44
VPS13CQ709C8 MIR506-201ENST00000384998 124 ntBASIC-0.19□□□□□ -2.44
VPS13CQ709C8 MIR767-201ENST00000390228 109 ntBASIC-0.19□□□□□ -2.44
VPS13CQ709C8 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC-0.19□□□□□ -2.44
VPS13CQ709C8 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC-0.19□□□□□ -2.44
VPS13CQ709C8 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC-0.19□□□□□ -2.44
VPS13CQ709C8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC-0.19□□□□□ -2.44
VPS13CQ709C8 MIR3126-201ENST00000577443 74 ntBASIC-0.19□□□□□ -2.44
VPS13CQ709C8 AC008121.1-201ENST00000603244 268 ntBASIC-0.19□□□□□ -2.44
VPS13CQ709C8 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.19□□□□□ -2.44
VPS13CQ709C8 SNORA32.1-201ENST00000364514 115 ntBASIC-0.19□□□□□ -2.44
VPS13CQ709C8 AL356320.2-201ENST00000417263 507 ntBASIC-0.19□□□□□ -2.44
VPS13CQ709C8 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC-0.19□□□□□ -2.44
VPS13CQ709C8 RPS15AP5-201ENST00000436276 388 ntBASIC-0.19□□□□□ -2.44
VPS13CQ709C8 RNFT1P2-201ENST00000443064 757 ntBASIC-0.19□□□□□ -2.44
VPS13CQ709C8 snoU13.9-201ENST00000458927 103 ntBASIC-0.19□□□□□ -2.44
VPS13CQ709C8 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC-0.19□□□□□ -2.44
VPS13CQ709C8 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC-0.19□□□□□ -2.44
VPS13CQ709C8 AC025588.2-201ENST00000604851 466 ntBASIC-0.19□□□□□ -2.44
VPS13CQ709C8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC-0.19□□□□□ -2.44
VPS13CQ709C8 SNORA68.3-201ENST00000515906 83 ntBASIC-0.2□□□□□ -2.44
VPS13CQ709C8 RNA5SP227-201ENST00000516184 113 ntBASIC-0.2□□□□□ -2.44
VPS13CQ709C8 AL022345.2-201ENST00000606307 135 ntBASIC-0.2□□□□□ -2.44
VPS13CQ709C8 AC092106.3-201ENST00000611308 722 ntBASIC-0.2□□□□□ -2.44
VPS13CQ709C8 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.2□□□□□ -2.44
VPS13CQ709C8 RNA5SP275-201ENST00000363936 118 ntBASIC-0.2□□□□□ -2.44
VPS13CQ709C8 RNU4-63P-201ENST00000411313 118 ntBASIC-0.2□□□□□ -2.44
VPS13CQ709C8 AC098614.2-201ENST00000426040 255 ntBASIC-0.2□□□□□ -2.44
VPS13CQ709C8 RNA5SP112-201ENST00000515937 99 ntBASIC-0.2□□□□□ -2.44
VPS13CQ709C8 AC021506.2-201ENST00000612354 169 ntBASIC-0.2□□□□□ -2.44
VPS13CQ709C8 SNORD33-201ENST00000362761 85 ntBASIC-0.2□□□□□ -2.44
VPS13CQ709C8 AL353691.1-201ENST00000451332 387 ntBASIC-0.2□□□□□ -2.44
VPS13CQ709C8 AC116347.2-201ENST00000514912 523 ntBASIC-0.2□□□□□ -2.44
VPS13CQ709C8 SNORD116-28-201ENST00000516123 91 ntBASIC-0.2□□□□□ -2.44
VPS13CQ709C8 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.2□□□□□ -2.44
VPS13CQ709C8 AL591926.4-201ENST00000616895 298 ntBASIC-0.2□□□□□ -2.44
VPS13CQ709C8 AC016716.1-201ENST00000265882 708 ntBASIC-0.21□□□□□ -2.44
VPS13CQ709C8 AL034374.1-201ENST00000406329 351 ntBASIC-0.21□□□□□ -2.44
VPS13CQ709C8 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC-0.21□□□□□ -2.44
VPS13CQ709C8 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
VPS13CQ709C8 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.21□□□□□ -2.44
VPS13CQ709C8 AC018638.7-201ENST00000605836 1114 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms