Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC015688.2-201ENST00000584523 262 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 AC010900.2-201ENST00000604508 210 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.28□□□□□ -2.36
CSPG4Q6UVK1 RNU6-374P-201ENST00000364146 108 ntBASIC0.28□□□□□ -2.36
CSPG4Q6UVK1 Y_RNA.453-201ENST00000384223 109 ntBASIC0.28□□□□□ -2.36
CSPG4Q6UVK1 DSTNP4-201ENST00000399472 474 ntBASIC0.28□□□□□ -2.36
CSPG4Q6UVK1 NDUFS5P1-201ENST00000405668 289 ntBASIC0.28□□□□□ -2.36
CSPG4Q6UVK1 RNU2-43P-201ENST00000410306 190 ntBASIC0.28□□□□□ -2.36
CSPG4Q6UVK1 RPS25P9-201ENST00000435591 252 ntBASIC0.28□□□□□ -2.36
CSPG4Q6UVK1 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.28□□□□□ -2.36
CSPG4Q6UVK1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.28□□□□□ -2.36
CSPG4Q6UVK1 SNORD116-30-201ENST00000516468 85 ntBASIC0.28□□□□□ -2.36
CSPG4Q6UVK1 AC090115.3-201ENST00000553218 849 ntBASIC0.28□□□□□ -2.36
CSPG4Q6UVK1 AC009268.1-201ENST00000561352 1203 ntBASIC0.28□□□□□ -2.36
CSPG4Q6UVK1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.28□□□□□ -2.36
CSPG4Q6UVK1 AC080013.4-201ENST00000607624 649 ntBASIC0.28□□□□□ -2.36
CSPG4Q6UVK1 AC027335.2-201ENST00000624030 375 ntBASIC0.28□□□□□ -2.36
CSPG4Q6UVK1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.28□□□□□ -2.37
CSPG4Q6UVK1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 MIR604-201ENST00000384880 94 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 MIR1267-201ENST00000408723 78 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 MTND4P6-201ENST00000438297 472 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 RPL26P6-201ENST00000440913 438 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 CR769776.1-201ENST00000441254 787 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 ARPC3P5-201ENST00000448802 534 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 AL157398.1-201ENST00000452981 186 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 AC010409.1-201ENST00000487382 476 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 RNU6-1256P-201ENST00000516539 103 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 SNRPGP17-201ENST00000603780 214 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 AC004775.1-201ENST00000607389 753 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 ZNF680P1-201ENST00000436625 1469 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 RPL22P22-201ENST00000395439 379 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 HMGN2P39-201ENST00000398005 273 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 SNX3P1X-201ENST00000414887 175 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 PIGFP2-201ENST00000421400 651 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 AL049734.2-201ENST00000441066 616 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 AC111000.5-201ENST00000506559 1178 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 HSPA8P13-201ENST00000523715 472 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 AC005832.3-201ENST00000537929 631 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 AC019288.1-201ENST00000557918 224 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 AC004817.2-201ENST00000561794 651 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 MIR4667-201ENST00000578933 66 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 MIR5190-201ENST00000581537 80 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 CLIC4P2-201ENST00000601934 717 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 AC021851.1-201ENST00000608537 1082 ntBASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.27□□□□□ -2.37
CSPG4Q6UVK1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 RNU6-1126P-201ENST00000384002 107 ntBASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 RNU6-1151P-201ENST00000384684 107 ntBASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 AC060773.1-201ENST00000421698 310 ntBASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 RSL24D1P8-201ENST00000434442 492 ntBASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 AL353706.1-201ENST00000436728 494 ntBASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 SNORD124-201ENST00000459577 104 ntBASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 AC067904.2-201ENST00000517322 1283 ntBASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 COPS8P3-201ENST00000526024 482 ntBASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 uc_338.15-201ENST00000615470 191 ntBASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 AC008443.7-201ENST00000622195 246 ntBASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 HSPE1P13-201ENST00000451143 297 ntBASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 AC067940.1-201ENST00000458411 300 ntBASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 AC114982.2-201ENST00000461396 358 ntBASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 AC006199.1-201ENST00000548728 219 ntBASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 AC026271.5-201ENST00000577873 130 ntBASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 AP001180.6-201ENST00000584918 159 ntBASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 AL391813.1-201ENST00000603098 260 ntBASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.26□□□□□ -2.37
CSPG4Q6UVK1 Z75746.1-201ENST00000440243 2080 ntBASIC0.25□□□□□ -2.37
CSPG4Q6UVK1 RNY4P24-201ENST00000362735 96 ntBASIC0.25□□□□□ -2.37
CSPG4Q6UVK1 RNU6-271P-201ENST00000363858 105 ntBASIC0.25□□□□□ -2.37
CSPG4Q6UVK1 MIR30A-201ENST00000385092 71 ntBASIC0.25□□□□□ -2.37
CSPG4Q6UVK1 NDUFB4P7-201ENST00000423198 363 ntBASIC0.25□□□□□ -2.37
CSPG4Q6UVK1 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.25□□□□□ -2.37
CSPG4Q6UVK1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.25□□□□□ -2.37
CSPG4Q6UVK1 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.25□□□□□ -2.37
CSPG4Q6UVK1 RNA5SP137-201ENST00000516833 135 ntBASIC0.25□□□□□ -2.37
CSPG4Q6UVK1 RNA5SP404-201ENST00000517118 132 ntBASIC0.25□□□□□ -2.37
CSPG4Q6UVK1 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.25□□□□□ -2.37
CSPG4Q6UVK1 CYCSP27-201ENST00000527643 293 ntBASIC0.25□□□□□ -2.37
CSPG4Q6UVK1 CYB5AP5-201ENST00000549779 389 ntBASIC0.25□□□□□ -2.37
CSPG4Q6UVK1 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms