Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 SNRPEP9-201ENST00000436794 238 ntBASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 UBE2D3P4-201ENST00000441973 436 ntBASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 SSXP1-201ENST00000453640 473 ntBASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 MTND3P7-201ENST00000474435 343 ntBASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 RNA5SP290-201ENST00000517133 127 ntBASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 RN7SKP258-201ENST00000517151 304 ntBASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 AC026407.1-201ENST00000518369 204 ntBASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 AC106038.2-201ENST00000520706 568 ntBASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 AP006587.4-201ENST00000526053 529 ntBASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 HMGN1P30-201ENST00000589286 268 ntBASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 AC012065.4-201ENST00000602445 679 ntBASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 AC098826.3-201ENST00000603823 466 ntBASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 AC004805.2-201ENST00000605382 482 ntBASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 AC091931.1-201ENST00000623488 728 ntBASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.51□□□□□ -2.17
SMARCD3Q6STE5 AC092104.1-201ENST00000497346 1441 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 MTND5P30-201ENST00000452896 1731 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 UBE2L2-201ENST00000254302 429 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 RNY4P24-201ENST00000362735 96 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 RNU6-1167P-201ENST00000363227 94 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 RNU6-778P-201ENST00000363269 103 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 RNU6-288P-201ENST00000363690 104 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 RNU4-1-201ENST00000363925 141 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 SMIM11P1-201ENST00000369586 178 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 MT-TH-201ENST00000387441 69 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 U8.13-201ENST00000390842 128 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AF228730.1-201ENST00000397972 663 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 FCF1P10-201ENST00000407590 479 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 U6atac.2-201ENST00000408644 118 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 NDUFS5P4-201ENST00000412983 318 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 VN1R36P-201ENST00000414936 291 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 CYCSP46-201ENST00000423569 204 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AC092447.3-201ENST00000426027 686 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 HMGN2P3-201ENST00000433603 273 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 MTND1P28-201ENST00000435623 950 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 IFNA20P-201ENST00000436840 528 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 HMGN2P5-201ENST00000436882 273 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 MTND1P30-201ENST00000441241 901 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 RPL7P12-201ENST00000446719 750 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AC108059.3-201ENST00000456388 214 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AC087884.1-201ENST00000469738 328 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AL160314.1-201ENST00000490836 438 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AC112204.1-201ENST00000502591 103 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 MTND4P2-201ENST00000507767 1203 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 RNU6-927P-201ENST00000516199 100 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 HSBP1P1-201ENST00000555205 166 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 LINC00933-203ENST00000559812 219 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AC012414.6-201ENST00000568241 401 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 DEFB122-202ENST00000569013 197 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 NIFKP6-201ENST00000598115 845 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AL158827.2-201ENST00000602494 330 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AL161798.1-201ENST00000604630 131 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AC121334.2-201ENST00000605387 271 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AC092354.1-201ENST00000606057 376 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 uc_338.12-201ENST00000616344 181 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AC092140.2-201ENST00000618027 521 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AL691447.3-201ENST00000635020 330 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 MIR3199-2-201ENST00000636243 86 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AC099654.13-201ENST00000639774 207 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 AC002543.1-201ENST00000299783 1954 ntBASIC1.5□□□□□ -2.17
SMARCD3Q6STE5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
SMARCD3Q6STE5 RNU4-21P-201ENST00000362802 126 ntBASIC1.49□□□□□ -2.17
SMARCD3Q6STE5 RNU6-511P-201ENST00000363496 107 ntBASIC1.49□□□□□ -2.17
SMARCD3Q6STE5 RNU6-1284P-201ENST00000363701 100 ntBASIC1.49□□□□□ -2.17
SMARCD3Q6STE5 Y_RNA.245-201ENST00000364493 95 ntBASIC1.49□□□□□ -2.17
SMARCD3Q6STE5 RNU6-997P-201ENST00000384725 107 ntBASIC1.49□□□□□ -2.17
SMARCD3Q6STE5 SNORD115.1-201ENST00000391109 76 ntBASIC1.49□□□□□ -2.17
SMARCD3Q6STE5 SNORA26.8-201ENST00000391306 124 ntBASIC1.49□□□□□ -2.17
SMARCD3Q6STE5 AL021407.1-201ENST00000404531 386 ntBASIC1.49□□□□□ -2.17
SMARCD3Q6STE5 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms