Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 RPS27AP10-201ENST00000496103 208 ntBASIC2.71□□□□□ -1.98
CTR9Q6PD62 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.71□□□□□ -1.98
CTR9Q6PD62 AC091435.1-201ENST00000505442 584 ntBASIC2.71□□□□□ -1.98
CTR9Q6PD62 HMGB1P29-201ENST00000505659 499 ntBASIC2.71□□□□□ -1.98
CTR9Q6PD62 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.71□□□□□ -1.98
CTR9Q6PD62 AC009902.1-201ENST00000519351 183 ntBASIC2.71□□□□□ -1.98
CTR9Q6PD62 FAM92A1P1-201ENST00000528023 890 ntBASIC2.71□□□□□ -1.98
CTR9Q6PD62 MIR4775-201ENST00000581168 75 ntBASIC2.71□□□□□ -1.98
CTR9Q6PD62 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.71□□□□□ -1.98
CTR9Q6PD62 AC078795.2-201ENST00000602835 1252 ntBASIC2.71□□□□□ -1.98
CTR9Q6PD62 AL136363.2-201ENST00000604173 851 ntBASIC2.71□□□□□ -1.98
CTR9Q6PD62 MIR6840-201ENST00000611937 71 ntBASIC2.71□□□□□ -1.98
CTR9Q6PD62 AP001486.3-201ENST00000615334 372 ntBASIC2.71□□□□□ -1.98
CTR9Q6PD62 AL359547.2-201ENST00000615810 418 ntBASIC2.71□□□□□ -1.98
CTR9Q6PD62 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.71□□□□□ -1.98
CTR9Q6PD62 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
CTR9Q6PD62 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.71□□□□□ -1.98
CTR9Q6PD62 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CTR9Q6PD62 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CTR9Q6PD62 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.7□□□□□ -1.98
CTR9Q6PD62 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.7□□□□□ -1.98
CTR9Q6PD62 Y_RNA.41-201ENST00000362646 102 ntBASIC2.7□□□□□ -1.98
CTR9Q6PD62 RNU6-461P-201ENST00000364195 107 ntBASIC2.7□□□□□ -1.98
CTR9Q6PD62 SNORD115-7-201ENST00000365306 82 ntBASIC2.7□□□□□ -1.98
CTR9Q6PD62 SNORA70B-201ENST00000384210 135 ntBASIC2.7□□□□□ -1.98
CTR9Q6PD62 Y_RNA.576-201ENST00000384781 102 ntBASIC2.7□□□□□ -1.98
CTR9Q6PD62 MIR454-201ENST00000390180 115 ntBASIC2.7□□□□□ -1.98
CTR9Q6PD62 AC023141.4-201ENST00000412031 328 ntBASIC2.7□□□□□ -1.98
CTR9Q6PD62 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.7□□□□□ -1.98
CTR9Q6PD62 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.7□□□□□ -1.98
CTR9Q6PD62 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.7□□□□□ -1.98
CTR9Q6PD62 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.7□□□□□ -1.98
CTR9Q6PD62 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.7□□□□□ -1.98
CTR9Q6PD62 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.7□□□□□ -1.98
CTR9Q6PD62 RPL26P9-201ENST00000457466 433 ntBASIC2.7□□□□□ -1.98
CTR9Q6PD62 AC114786.4-201ENST00000508771 728 ntBASIC2.7□□□□□ -1.98
CTR9Q6PD62 RNU6-143P-201ENST00000516942 93 ntBASIC2.7□□□□□ -1.98
CTR9Q6PD62 RNU6-685P-201ENST00000517088 95 ntBASIC2.7□□□□□ -1.98
CTR9Q6PD62 RNU6-1315P-201ENST00000517187 99 ntBASIC2.7□□□□□ -1.98
CTR9Q6PD62 OR5AL2P-201ENST00000532185 920 ntBASIC2.7□□□□□ -1.98
CTR9Q6PD62 ADI1P3-201ENST00000549509 470 ntBASIC2.7□□□□□ -1.98
CTR9Q6PD62 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.7□□□□□ -1.98
CTR9Q6PD62 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.7□□□□□ -1.98
CTR9Q6PD62 AL158032.1-201ENST00000605401 106 ntBASIC2.7□□□□□ -1.98
CTR9Q6PD62 AC126118.1-201ENST00000607744 628 ntBASIC2.7□□□□□ -1.98
CTR9Q6PD62 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.7□□□□□ -1.98
CTR9Q6PD62 MIR6766-201ENST00000622641 72 ntBASIC2.7□□□□□ -1.98
CTR9Q6PD62 AC011155.2-201ENST00000623202 216 ntBASIC2.7□□□□□ -1.98
CTR9Q6PD62 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.7□□□□□ -1.98
CTR9Q6PD62 MIR203B-201ENST00000636080 86 ntBASIC2.7□□□□□ -1.98
CTR9Q6PD62 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CTR9Q6PD62 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.69□□□□□ -1.98
CTR9Q6PD62 SNORA62.1-201ENST00000364287 154 ntBASIC2.69□□□□□ -1.98
CTR9Q6PD62 Y_RNA.296-201ENST00000364930 108 ntBASIC2.69□□□□□ -1.98
CTR9Q6PD62 SNORA75B-201ENST00000384053 137 ntBASIC2.69□□□□□ -1.98
CTR9Q6PD62 Y_RNA.517-201ENST00000384551 106 ntBASIC2.69□□□□□ -1.98
CTR9Q6PD62 RNA5SP354-201ENST00000391247 136 ntBASIC2.69□□□□□ -1.98
CTR9Q6PD62 CISD1P1-201ENST00000393907 327 ntBASIC2.69□□□□□ -1.98
CTR9Q6PD62 RNA5SP425-201ENST00000410336 112 ntBASIC2.69□□□□□ -1.98
CTR9Q6PD62 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.69□□□□□ -1.98
CTR9Q6PD62 MTATP6P18-201ENST00000417994 673 ntBASIC2.69□□□□□ -1.98
CTR9Q6PD62 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.69□□□□□ -1.98
CTR9Q6PD62 AL353193.1-201ENST00000421444 268 ntBASIC2.69□□□□□ -1.98
CTR9Q6PD62 BPY2DP-201ENST00000422208 265 ntBASIC2.69□□□□□ -1.98
CTR9Q6PD62 MTCYBP5-201ENST00000423752 1135 ntBASIC2.69□□□□□ -1.98
CTR9Q6PD62 AL356320.1-201ENST00000429616 163 ntBASIC2.69□□□□□ -1.98
CTR9Q6PD62 AC073464.1-201ENST00000429823 534 ntBASIC2.69□□□□□ -1.98
CTR9Q6PD62 AL139415.2-201ENST00000431968 163 ntBASIC2.69□□□□□ -1.98
CTR9Q6PD62 WASF1P1-201ENST00000447560 1131 ntBASIC2.69□□□□□ -1.98
CTR9Q6PD62 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.69□□□□□ -1.98
CTR9Q6PD62 Y_RNA.655-201ENST00000515919 96 ntBASIC2.69□□□□□ -1.98
CTR9Q6PD62 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.69□□□□□ -1.98
CTR9Q6PD62 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CTR9Q6PD62 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.69□□□□□ -1.98
CTR9Q6PD62 AP000889.2-201ENST00000532684 490 ntBASIC2.69□□□□□ -1.98
CTR9Q6PD62 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.69□□□□□ -1.98
CTR9Q6PD62 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.69□□□□□ -1.98
CTR9Q6PD62 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.69□□□□□ -1.98
CTR9Q6PD62 AC105137.2-201ENST00000569073 466 ntBASIC2.69□□□□□ -1.98
CTR9Q6PD62 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CTR9Q6PD62 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.69□□□□□ -1.98
CTR9Q6PD62 HULC.1-201ENST00000612720 240 ntBASIC2.69□□□□□ -1.98
CTR9Q6PD62 AC245884.12-201ENST00000615364 59 ntBASIC2.69□□□□□ -1.98
CTR9Q6PD62 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.69□□□□□ -1.98
CTR9Q6PD62 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
CTR9Q6PD62 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.69□□□□□ -1.98
CTR9Q6PD62 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CTR9Q6PD62 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CTR9Q6PD62 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CTR9Q6PD62 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CTR9Q6PD62 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CTR9Q6PD62 AL596028.1-201ENST00000326971 197 ntBASIC2.68□□□□□ -1.98
CTR9Q6PD62 RNU4-48P-201ENST00000365559 182 ntBASIC2.68□□□□□ -1.98
CTR9Q6PD62 MIR221-201ENST00000385135 110 ntBASIC2.68□□□□□ -1.98
CTR9Q6PD62 MIR301A-201ENST00000385261 86 ntBASIC2.68□□□□□ -1.98
CTR9Q6PD62 AC068050.1-201ENST00000394891 380 ntBASIC2.68□□□□□ -1.98
CTR9Q6PD62 RNU2-9P-201ENST00000410194 145 ntBASIC2.68□□□□□ -1.98
CTR9Q6PD62 NDUFS5P4-201ENST00000412983 318 ntBASIC2.68□□□□□ -1.98
CTR9Q6PD62 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.68□□□□□ -1.98
CTR9Q6PD62 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms