Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 RPL22P13-201ENST00000493291 347 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 AP003034.1-201ENST00000534621 422 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 AL356432.3-201ENST00000568952 465 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 AC115085.1-201ENST00000588924 229 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 AC068790.6-201ENST00000602558 258 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 AC084373.1-201ENST00000603311 235 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 OR5AK4P-201ENST00000635912 903 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 MIR4315-1-201ENST00000636800 73 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 MIR4315-2-201ENST00000640925 73 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC-0.05□□□□□ -2.42
VPS13DQ5THJ4 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
VPS13DQ5THJ4 MED28P6-201ENST00000558776 231 ntBASIC-0.05□□□□□ -2.42
VPS13DQ5THJ4 PCNAP1-202ENST00000595299 752 ntBASIC-0.05□□□□□ -2.42
VPS13DQ5THJ4 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC-0.05□□□□□ -2.42
VPS13DQ5THJ4 AC010738.1-201ENST00000604970 987 ntBASIC-0.05□□□□□ -2.42
VPS13DQ5THJ4 RN7SKP142-201ENST00000411236 328 ntBASIC-0.05□□□□□ -2.42
VPS13DQ5THJ4 AC007742.1-201ENST00000425789 329 ntBASIC-0.05□□□□□ -2.42
VPS13DQ5THJ4 PTGES3P4-201ENST00000426243 356 ntBASIC-0.05□□□□□ -2.42
VPS13DQ5THJ4 ELOCP26-201ENST00000436067 329 ntBASIC-0.05□□□□□ -2.42
VPS13DQ5THJ4 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC-0.05□□□□□ -2.42
VPS13DQ5THJ4 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.05□□□□□ -2.42
VPS13DQ5THJ4 AC112206.3-201ENST00000514578 389 ntBASIC-0.05□□□□□ -2.42
VPS13DQ5THJ4 SNORA31.22-201ENST00000517204 135 ntBASIC-0.05□□□□□ -2.42
VPS13DQ5THJ4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC-0.05□□□□□ -2.42
VPS13DQ5THJ4 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.05□□□□□ -2.42
VPS13DQ5THJ4 MIR561-201ENST00000385216 97 ntBASIC-0.05□□□□□ -2.42
VPS13DQ5THJ4 AC016717.1-201ENST00000448918 286 ntBASIC-0.05□□□□□ -2.42
VPS13DQ5THJ4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.05□□□□□ -2.42
VPS13DQ5THJ4 AC013244.3-201ENST00000605614 388 ntBASIC-0.05□□□□□ -2.42
VPS13DQ5THJ4 AC005832.2-201ENST00000538921 1430 ntBASIC-0.05□□□□□ -2.42
VPS13DQ5THJ4 MIRLET7D-201ENST00000362263 87 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 MIR1267-201ENST00000408723 78 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 RNU2-7P-201ENST00000410794 178 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 MTND4LP21-201ENST00000415303 295 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 MTCO2P12-201ENST00000427426 682 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 HMGN1P12-201ENST00000499125 195 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 AF213884.2-201ENST00000510417 903 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 AC090142.3-201ENST00000519012 385 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 AC095031.1-201ENST00000623685 672 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 MIR601-201ENST00000385256 79 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 HMGN2P39-201ENST00000398005 273 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 DHFRP6-201ENST00000401776 268 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 AC092423.1-201ENST00000430165 186 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 ELOCP11-201ENST00000436690 332 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 ELOCP16-201ENST00000444494 332 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 AC010631.1-201ENST00000474150 156 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 RNU4-54P-201ENST00000516428 129 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 SNRPGP16-201ENST00000533275 226 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 AC092474.3-201ENST00000603022 568 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 RNU6-945P-201ENST00000383947 107 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 HMGN2P22-201ENST00000427588 175 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 AC116347.2-201ENST00000514912 523 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 IGJP1-201ENST00000522682 475 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 MIR3678-201ENST00000578455 94 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 Z98751.3-201ENST00000604447 521 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 ZNF663P-202ENST00000641770 1131 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 AL391994.1-201ENST00000254724 282 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 RNY3-201ENST00000365484 102 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 SNORD89-201ENST00000390981 114 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 RNU6-1197P-201ENST00000391183 107 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 EIF1P1-201ENST00000421436 341 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 snoU13.11-201ENST00000459219 104 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 AL049874.1-201ENST00000489560 388 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 ADAM3B-201ENST00000569937 840 ntBASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.06□□□□□ -2.42
VPS13DQ5THJ4 OR5T3-201ENST00000303059 1023 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 UBE2Q2P1-202ENST00000354771 883 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 AC090625.1-201ENST00000357130 210 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 SNORD114-28-201ENST00000363610 72 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 MIR518A1-201ENST00000385068 85 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 AL109913.1-201ENST00000421173 514 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 AL353691.1-201ENST00000451332 387 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 SNORA4.4-201ENST00000515921 135 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 RNA5SP67-201ENST00000516422 131 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 CYP3A52P-201ENST00000563326 91 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 AC002545.1-201ENST00000592511 181 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 uc_338.14-201ENST00000613162 166 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 AL078604.3-201ENST00000615580 211 ntBASIC-0.07□□□□□ -2.42
VPS13DQ5THJ4 AC027335.2-201ENST00000624030 375 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms