Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.46□□□□□ -1.69
RNFT1Q5M7Z0 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RNFT1Q5M7Z0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 Z95331.1-201ENST00000623075 23112 ntBASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 RNU6-324P-201ENST00000363957 106 ntBASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 RNU6-793P-201ENST00000384233 104 ntBASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 RNU6-554P-201ENST00000410466 106 ntBASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 RPS26P42-201ENST00000413485 326 ntBASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 AC098614.2-201ENST00000426040 255 ntBASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 AC245047.4-201ENST00000433189 144 ntBASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 AL691482.1-201ENST00000453255 87 ntBASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 Y_RNA.649-201ENST00000459077 103 ntBASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 AL049874.1-201ENST00000489560 388 ntBASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 RNU6-412P-201ENST00000516434 106 ntBASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 MIR378J-201ENST00000611988 109 ntBASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 AC024581.2-201ENST00000619986 252 ntBASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.7
RNFT1Q5M7Z0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 AL136164.4-201ENST00000625013 2135 ntBASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 RNU6-766P-201ENST00000362478 107 ntBASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 Y_RNA.346-201ENST00000365385 112 ntBASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 MIR548A1-201ENST00000385041 97 ntBASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 AL357515.1-201ENST00000402967 542 ntBASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 U3.37-201ENST00000408528 213 ntBASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 RNU6-710P-201ENST00000410424 105 ntBASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 FTH1P6-201ENST00000430768 320 ntBASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 RPS17P2-201ENST00000461663 408 ntBASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 RN7SL346P-201ENST00000491561 294 ntBASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 RN7SKP276-201ENST00000516242 268 ntBASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 AP004607.1-201ENST00000524456 203 ntBASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 AC107016.1-201ENST00000550463 337 ntBASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 AC091178.2-201ENST00000584401 117 ntBASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 MIR7641-1-201ENST00000627518 61 ntBASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RNFT1Q5M7Z0 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 RNU6-1205P-201ENST00000363625 106 ntBASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 RNU1-32P-201ENST00000363937 159 ntBASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 RNU6-647P-201ENST00000364243 107 ntBASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 RNY3P5-201ENST00000384127 102 ntBASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 MIRLET7F2-201ENST00000385277 83 ntBASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 RPS3AP1-201ENST00000413190 320 ntBASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 Z85995.1-201ENST00000415547 335 ntBASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 GPM6BP3-201ENST00000442797 145 ntBASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 AC109327.2-201ENST00000448339 378 ntBASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 AL132838.2-201ENST00000492041 314 ntBASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 RNA5SP290-201ENST00000517133 127 ntBASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 MIR3936-201ENST00000584304 110 ntBASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 AC120024.3-201ENST00000603167 156 ntBASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 AL022401.1-201ENST00000619498 108 ntBASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RNFT1Q5M7Z0 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNFT1Q5M7Z0 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms