Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AC073539.2-201ENST00000597113 165 ntBASIC2.98□□□□□ -1.93
USP41Q3LFD5 NUTF2P8-201ENST00000604593 363 ntBASIC2.98□□□□□ -1.93
USP41Q3LFD5 AC104458.1-201ENST00000608243 463 ntBASIC2.98□□□□□ -1.93
USP41Q3LFD5 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.98□□□□□ -1.93
USP41Q3LFD5 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.98□□□□□ -1.93
USP41Q3LFD5 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
USP41Q3LFD5 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.97□□□□□ -1.93
USP41Q3LFD5 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
USP41Q3LFD5 OR4G1P-203ENST00000641984 1631 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 AC004944.1-201ENST00000517807 3059 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 RNU6-859P-201ENST00000362728 107 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 RNU1-112P-201ENST00000364401 164 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 RNA5SP126-201ENST00000365092 109 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 RNU4-20P-201ENST00000365601 151 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 CD24P4-201ENST00000382840 243 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 RNU6-38P-201ENST00000384085 107 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 RNU6-434P-201ENST00000384376 107 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 MIR512-1-201ENST00000384913 84 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 SNORA16.2-201ENST00000390991 127 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.97□□□□□ -1.93
USP41Q3LFD5 SNORD88.1-201ENST00000408684 91 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.97□□□□□ -1.93
USP41Q3LFD5 RNA5SP21-201ENST00000410917 96 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 NDUFS5P4-201ENST00000412983 318 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.97□□□□□ -1.93
USP41Q3LFD5 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.97□□□□□ -1.93
USP41Q3LFD5 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.97□□□□□ -1.93
USP41Q3LFD5 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.97□□□□□ -1.93
USP41Q3LFD5 SAR1AP4-201ENST00000429225 591 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.97□□□□□ -1.93
USP41Q3LFD5 AL078601.1-201ENST00000444542 271 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 MTND3P16-201ENST00000452205 344 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 RNU6-333P-201ENST00000459117 107 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 RN7SL429P-201ENST00000479090 223 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 RPL21P99-201ENST00000480369 423 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 RN7SL489P-201ENST00000486185 223 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 RN7SL327P-201ENST00000488659 223 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 AC114786.4-201ENST00000508771 728 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 MTND3P25-201ENST00000509243 135 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 AL117351.2-201ENST00000513571 157 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 SNORA31.21-201ENST00000517180 77 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.97□□□□□ -1.93
USP41Q3LFD5 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.97□□□□□ -1.93
USP41Q3LFD5 HPRT1P3-201ENST00000539521 576 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.97□□□□□ -1.93
USP41Q3LFD5 AL138976.2-201ENST00000563989 694 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.97□□□□□ -1.93
USP41Q3LFD5 MIR4424-201ENST00000585257 86 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 AC107871.2-201ENST00000612894 502 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 AC004852.3-201ENST00000614131 326 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 RN7SL853P-201ENST00000617250 223 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 AP003400.5-201ENST00000624827 617 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 MIR3662-201ENST00000637030 95 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 AC024614.3-201ENST00000637860 256 ntBASIC2.97□□□□□ -1.93
USP41Q3LFD5 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.97□□□□□ -1.93
USP41Q3LFD5 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
USP41Q3LFD5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.96□□□□□ -1.94
USP41Q3LFD5 AC004520.1-201ENST00000608362 1413 ntBASIC2.96□□□□□ -1.94
USP41Q3LFD5 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
USP41Q3LFD5 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
USP41Q3LFD5 MIR412-201ENST00000362142 91 ntBASIC2.96□□□□□ -1.94
USP41Q3LFD5 RNU1-35P-201ENST00000362782 153 ntBASIC2.96□□□□□ -1.94
USP41Q3LFD5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
USP41Q3LFD5 RNU6-1027P-201ENST00000383998 107 ntBASIC2.96□□□□□ -1.94
USP41Q3LFD5 SNORA40C-201ENST00000391285 128 ntBASIC2.96□□□□□ -1.94
USP41Q3LFD5 AL139413.1-201ENST00000421309 217 ntBASIC2.96□□□□□ -1.94
USP41Q3LFD5 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.96□□□□□ -1.94
USP41Q3LFD5 ARL5AP4-201ENST00000430731 512 ntBASIC2.96□□□□□ -1.94
USP41Q3LFD5 MRPS10P2-201ENST00000431226 381 ntBASIC2.96□□□□□ -1.94
USP41Q3LFD5 MYL8P-204ENST00000431574 518 ntBASIC2.96□□□□□ -1.94
USP41Q3LFD5 PRPS1P1-201ENST00000445305 876 ntBASIC2.96□□□□□ -1.94
USP41Q3LFD5 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.96□□□□□ -1.94
USP41Q3LFD5 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.96□□□□□ -1.94
USP41Q3LFD5 FGF7P6-202ENST00000451282 293 ntBASIC2.96□□□□□ -1.94
USP41Q3LFD5 MTATP6P7-201ENST00000453315 681 ntBASIC2.96□□□□□ -1.94
USP41Q3LFD5 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.96□□□□□ -1.94
USP41Q3LFD5 RNU7-23P-201ENST00000459465 62 ntBASIC2.96□□□□□ -1.94
USP41Q3LFD5 MTCO3P38-201ENST00000468910 766 ntBASIC2.96□□□□□ -1.94
USP41Q3LFD5 CCDC34P1-201ENST00000507441 517 ntBASIC2.96□□□□□ -1.94
USP41Q3LFD5 AC008716.1-201ENST00000511084 513 ntBASIC2.96□□□□□ -1.94
USP41Q3LFD5 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.96□□□□□ -1.94
USP41Q3LFD5 AC010486.1-201ENST00000511793 424 ntBASIC2.96□□□□□ -1.94
USP41Q3LFD5 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.96□□□□□ -1.94
USP41Q3LFD5 RNU2-69P-201ENST00000516061 100 ntBASIC2.96□□□□□ -1.94
USP41Q3LFD5 RNU6-1183P-201ENST00000517054 60 ntBASIC2.96□□□□□ -1.94
USP41Q3LFD5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.96□□□□□ -1.94
USP41Q3LFD5 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.96□□□□□ -1.94
USP41Q3LFD5 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.96□□□□□ -1.94
USP41Q3LFD5 AC002553.4-201ENST00000616896 331 ntBASIC2.96□□□□□ -1.94
USP41Q3LFD5 IGHVIII-44-202ENST00000636235 289 ntBASIC2.96□□□□□ -1.94
USP41Q3LFD5 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
USP41Q3LFD5 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.96□□□□□ -1.94
USP41Q3LFD5 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.95□□□□□ -1.94
USP41Q3LFD5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
USP41Q3LFD5 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
USP41Q3LFD5 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
USP41Q3LFD5 RNU4-82P-201ENST00000362443 140 ntBASIC2.95□□□□□ -1.94
USP41Q3LFD5 RNU6-166P-201ENST00000384371 107 ntBASIC2.95□□□□□ -1.94
USP41Q3LFD5 MIR34A-201ENST00000385130 110 ntBASIC2.95□□□□□ -1.94
USP41Q3LFD5 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms