Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SF3B3Q15393 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.72□□□□□ -1.81
SF3B3Q15393 HSPA8P4-201ENST00000511877 1920 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
SF3B3Q15393 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
SF3B3Q15393 RNU6-715P-201ENST00000365204 103 ntBASIC3.71□□□□□ -1.82
SF3B3Q15393 RNU6-190P-201ENST00000384154 102 ntBASIC3.71□□□□□ -1.82
SF3B3Q15393 CISD1P1-201ENST00000393907 327 ntBASIC3.71□□□□□ -1.82
SF3B3Q15393 RNU6-1304P-201ENST00000411374 106 ntBASIC3.71□□□□□ -1.82
SF3B3Q15393 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.71□□□□□ -1.82
SF3B3Q15393 AC022018.1-201ENST00000430685 241 ntBASIC3.71□□□□□ -1.82
SF3B3Q15393 AL591704.1-201ENST00000432574 275 ntBASIC3.71□□□□□ -1.82
SF3B3Q15393 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.71□□□□□ -1.82
SF3B3Q15393 RPL32P28-201ENST00000443577 397 ntBASIC3.71□□□□□ -1.82
SF3B3Q15393 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.71□□□□□ -1.82
SF3B3Q15393 HMGN1P18-201ENST00000457642 277 ntBASIC3.71□□□□□ -1.82
SF3B3Q15393 snoU13.4-201ENST00000458916 104 ntBASIC3.71□□□□□ -1.82
SF3B3Q15393 RNU7-167P-201ENST00000459160 62 ntBASIC3.71□□□□□ -1.82
SF3B3Q15393 AC130509.1-201ENST00000464158 433 ntBASIC3.71□□□□□ -1.82
SF3B3Q15393 RN7SL20P-201ENST00000488827 297 ntBASIC3.71□□□□□ -1.82
SF3B3Q15393 AC090096.1-201ENST00000489168 390 ntBASIC3.71□□□□□ -1.82
SF3B3Q15393 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.71□□□□□ -1.82
SF3B3Q15393 RNU6-1069P-201ENST00000516612 133 ntBASIC3.71□□□□□ -1.82
SF3B3Q15393 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.71□□□□□ -1.82
SF3B3Q15393 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.71□□□□□ -1.82
SF3B3Q15393 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.71□□□□□ -1.82
SF3B3Q15393 AC138761.3-201ENST00000579993 334 ntBASIC3.71□□□□□ -1.82
SF3B3Q15393 AC006504.6-201ENST00000590142 199 ntBASIC3.71□□□□□ -1.82
SF3B3Q15393 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.71□□□□□ -1.82
SF3B3Q15393 AL591516.1-201ENST00000611326 274 ntBASIC3.71□□□□□ -1.82
SF3B3Q15393 AC007318.2-201ENST00000620999 243 ntBASIC3.71□□□□□ -1.82
SF3B3Q15393 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.71□□□□□ -1.82
SF3B3Q15393 ZNF826P-207ENST00000622273 1910 ntBASIC3.71□□□□□ -1.82
SF3B3Q15393 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SF3B3Q15393 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
SF3B3Q15393 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.7□□□□□ -1.82
SF3B3Q15393 ZNF519P1-201ENST00000449011 1626 ntBASIC3.7□□□□□ -1.82
SF3B3Q15393 RNU6-1188P-201ENST00000363795 107 ntBASIC3.7□□□□□ -1.82
SF3B3Q15393 Y_RNA.187-201ENST00000363918 113 ntBASIC3.7□□□□□ -1.82
SF3B3Q15393 Y_RNA.422-201ENST00000384054 114 ntBASIC3.7□□□□□ -1.82
SF3B3Q15393 RNU6-434P-201ENST00000384376 107 ntBASIC3.7□□□□□ -1.82
SF3B3Q15393 RNU6-817P-201ENST00000391083 104 ntBASIC3.7□□□□□ -1.82
SF3B3Q15393 MIR450B-201ENST00000401182 78 ntBASIC3.7□□□□□ -1.82
SF3B3Q15393 AL139397.2-201ENST00000404529 772 ntBASIC3.7□□□□□ -1.82
SF3B3Q15393 RNA5SP111-201ENST00000411386 101 ntBASIC3.7□□□□□ -1.82
SF3B3Q15393 RPLP0P7-201ENST00000416050 667 ntBASIC3.7□□□□□ -1.82
SF3B3Q15393 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SF3B3Q15393 YPEL5P1-201ENST00000419731 367 ntBASIC3.7□□□□□ -1.82
SF3B3Q15393 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.7□□□□□ -1.82
SF3B3Q15393 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.7□□□□□ -1.82
SF3B3Q15393 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.7□□□□□ -1.82
SF3B3Q15393 AL163540.1-201ENST00000485382 386 ntBASIC3.7□□□□□ -1.82
SF3B3Q15393 RPS27P27-201ENST00000498779 255 ntBASIC3.7□□□□□ -1.82
SF3B3Q15393 AC008526.1-201ENST00000509149 338 ntBASIC3.7□□□□□ -1.82
SF3B3Q15393 SNORA14.1-201ENST00000516113 141 ntBASIC3.7□□□□□ -1.82
SF3B3Q15393 RNU6-677P-201ENST00000516914 101 ntBASIC3.7□□□□□ -1.82
SF3B3Q15393 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.7□□□□□ -1.82
SF3B3Q15393 MIR3941-201ENST00000582572 103 ntBASIC3.7□□□□□ -1.82
SF3B3Q15393 MIR5692C1-201ENST00000585309 91 ntBASIC3.7□□□□□ -1.82
SF3B3Q15393 AL355802.3-201ENST00000607571 545 ntBASIC3.7□□□□□ -1.82
SF3B3Q15393 MTND5P42-201ENST00000637720 498 ntBASIC3.7□□□□□ -1.82
SF3B3Q15393 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SF3B3Q15393 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.7□□□□□ -1.82
SF3B3Q15393 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SF3B3Q15393 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SF3B3Q15393 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SF3B3Q15393 AL365361.1-201ENST00000566942 3481 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 Y_RNA.146-201ENST00000363549 102 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 Y_RNA.197-201ENST00000364004 102 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 Y_RNA.202-201ENST00000364083 110 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 SNORA33.2-201ENST00000365413 134 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 Y_RNA.445-201ENST00000384168 102 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 SNORA36C-201ENST00000384289 132 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 Y_RNA.482-201ENST00000384377 111 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 RNU6-1160P-201ENST00000384546 104 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SF3B3Q15393 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SF3B3Q15393 AC245054.2-201ENST00000415639 319 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.69□□□□□ -1.82
SF3B3Q15393 TRIAP1P1-201ENST00000427062 225 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 MTATP6P4-201ENST00000427725 675 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 RPL26P6-201ENST00000440913 438 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 ELOCP24-201ENST00000456370 334 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.69□□□□□ -1.82
SF3B3Q15393 AC079140.5-201ENST00000507882 310 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.69□□□□□ -1.82
SF3B3Q15393 AC093303.1-201ENST00000514549 295 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.69□□□□□ -1.82
SF3B3Q15393 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.69□□□□□ -1.82
SF3B3Q15393 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.69□□□□□ -1.82
SF3B3Q15393 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SF3B3Q15393 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.69□□□□□ -1.82
SF3B3Q15393 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.69□□□□□ -1.82
SF3B3Q15393 AC005951.2-201ENST00000576282 495 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 CYP2C61P-201ENST00000604072 290 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 AC040896.1-201ENST00000613819 479 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 AL110115.1-201ENST00000614396 364 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 AC068831.7-201ENST00000616954 363 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 AC098657.3-201ENST00000620434 263 ntBASIC3.69□□□□□ -1.82
SF3B3Q15393 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms