Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 RNA5SP100-201ENST00000410903 110 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 RNA5SP59-201ENST00000410922 110 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 PPP1R11P2-201ENST00000423543 382 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.64□□□□□ -2.31
CPSF1Q10570 AC025465.3-201ENST00000510570 311 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 RNU6-889P-201ENST00000517189 103 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.64□□□□□ -2.31
CPSF1Q10570 CYCSP27-201ENST00000527643 293 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 OR6C7P-201ENST00000547875 934 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.64□□□□□ -2.31
CPSF1Q10570 CYP2C61P-201ENST00000604072 290 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 AL078604.3-201ENST00000615580 211 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 RNA5SP327-201ENST00000362494 101 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 SNORD1A-201ENST00000364968 72 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CPSF1Q10570 RNU6-26P-201ENST00000383985 107 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 RNU6-439P-201ENST00000384188 106 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 SKA2P1-201ENST00000425592 390 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.64□□□□□ -2.31
CPSF1Q10570 MTCO1P44-201ENST00000441935 243 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.64□□□□□ -2.31
CPSF1Q10570 ARL2BPP5-201ENST00000523141 481 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.64□□□□□ -2.31
CPSF1Q10570 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.64□□□□□ -2.31
CPSF1Q10570 ROCK1P1-201ENST00000573767 549 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 AC115989.2-201ENST00000578640 563 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.64□□□□□ -2.31
CPSF1Q10570 AC021171.1-201ENST00000603137 706 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 AC069304.2-201ENST00000605154 435 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 AL022345.1-201ENST00000607292 135 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 AL109620.1-201ENST00000618738 1197 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 U2.21-201ENST00000637295 81 ntBASIC0.64□□□□□ -2.31
CPSF1Q10570 RNU6-778P-201ENST00000363269 103 ntBASIC0.63□□□□□ -2.31
CPSF1Q10570 RNU1-23P-201ENST00000363361 144 ntBASIC0.63□□□□□ -2.31
CPSF1Q10570 MIR597-201ENST00000384968 97 ntBASIC0.63□□□□□ -2.31
CPSF1Q10570 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.63□□□□□ -2.31
CPSF1Q10570 PIGFP2-201ENST00000421400 651 ntBASIC0.63□□□□□ -2.31
CPSF1Q10570 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.63□□□□□ -2.31
CPSF1Q10570 LRRC34P2-201ENST00000514850 553 ntBASIC0.63□□□□□ -2.31
CPSF1Q10570 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.63□□□□□ -2.31
CPSF1Q10570 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.63□□□□□ -2.31
CPSF1Q10570 AC012213.3-201ENST00000577199 777 ntBASIC0.63□□□□□ -2.31
CPSF1Q10570 AL713866.2-201ENST00000603579 219 ntBASIC0.63□□□□□ -2.31
CPSF1Q10570 AC004492.1-201ENST00000607036 742 ntBASIC0.63□□□□□ -2.31
CPSF1Q10570 AC013476.2-201ENST00000614456 459 ntBASIC0.63□□□□□ -2.31
CPSF1Q10570 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.63□□□□□ -2.31
CPSF1Q10570 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.63□□□□□ -2.31
CPSF1Q10570 MIR5087-201ENST00000635826 76 ntBASIC0.63□□□□□ -2.31
CPSF1Q10570 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.62□□□□□ -2.31
CPSF1Q10570 MIR525-201ENST00000384978 85 ntBASIC0.62□□□□□ -2.31
CPSF1Q10570 FTH1P15-201ENST00000406984 280 ntBASIC0.62□□□□□ -2.31
CPSF1Q10570 USP9YP26-201ENST00000421008 661 ntBASIC0.62□□□□□ -2.31
CPSF1Q10570 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.62□□□□□ -2.31
CPSF1Q10570 USP9YP18-201ENST00000425912 695 ntBASIC0.62□□□□□ -2.31
CPSF1Q10570 PTGES3P4-201ENST00000426243 356 ntBASIC0.62□□□□□ -2.31
CPSF1Q10570 AL353706.1-201ENST00000436728 494 ntBASIC0.62□□□□□ -2.31
CPSF1Q10570 USP9YP17-201ENST00000444617 696 ntBASIC0.62□□□□□ -2.31
CPSF1Q10570 AL035666.1-201ENST00000446195 348 ntBASIC0.62□□□□□ -2.31
CPSF1Q10570 RPS20P10-201ENST00000451209 253 ntBASIC0.62□□□□□ -2.31
CPSF1Q10570 AL441985.1-201ENST00000457727 251 ntBASIC0.62□□□□□ -2.31
CPSF1Q10570 AC108729.1-201ENST00000487812 947 ntBASIC0.62□□□□□ -2.31
CPSF1Q10570 RNU6-667P-201ENST00000517186 102 ntBASIC0.62□□□□□ -2.31
CPSF1Q10570 AC012414.6-201ENST00000568241 401 ntBASIC0.62□□□□□ -2.31
CPSF1Q10570 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.62□□□□□ -2.31
CPSF1Q10570 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.62□□□□□ -2.31
CPSF1Q10570 AC011939.3-201ENST00000613686 466 ntBASIC0.62□□□□□ -2.31
CPSF1Q10570 AL391516.1-201ENST00000554380 2449 ntBASIC0.61□□□□□ -2.31
CPSF1Q10570 RNU1-58P-201ENST00000362413 163 ntBASIC0.61□□□□□ -2.31
CPSF1Q10570 AC127391.1-201ENST00000411737 98 ntBASIC0.61□□□□□ -2.31
CPSF1Q10570 RPS27P16-201ENST00000425758 201 ntBASIC0.61□□□□□ -2.31
CPSF1Q10570 SNRPEP9-201ENST00000436794 238 ntBASIC0.61□□□□□ -2.31
CPSF1Q10570 AL353691.1-201ENST00000451332 387 ntBASIC0.61□□□□□ -2.31
CPSF1Q10570 RPL21P47-201ENST00000483696 477 ntBASIC0.61□□□□□ -2.31
CPSF1Q10570 AC109927.2-201ENST00000506416 303 ntBASIC0.61□□□□□ -2.31
CPSF1Q10570 CYCSP23-201ENST00000519781 313 ntBASIC0.61□□□□□ -2.31
CPSF1Q10570 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.61□□□□□ -2.31
CPSF1Q10570 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.61□□□□□ -2.31
CPSF1Q10570 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.61□□□□□ -2.31
CPSF1Q10570 AP001429.1-201ENST00000602568 530 ntBASIC0.61□□□□□ -2.31
CPSF1Q10570 AL020997.3-201ENST00000602843 359 ntBASIC0.61□□□□□ -2.31
CPSF1Q10570 AC239868.4-201ENST00000608318 671 ntBASIC0.61□□□□□ -2.31
CPSF1Q10570 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.61□□□□□ -2.31
CPSF1Q10570 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.61□□□□□ -2.31
CPSF1Q10570 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
CPSF1Q10570 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
CPSF1Q10570 SNORA29-201ENST00000384183 140 ntBASIC0.6□□□□□ -2.31
CPSF1Q10570 MIR1302-8-201ENST00000408342 128 ntBASIC0.6□□□□□ -2.31
CPSF1Q10570 RNU6-77P-201ENST00000410554 91 ntBASIC0.6□□□□□ -2.31
CPSF1Q10570 MTCYBP38-201ENST00000417160 1123 ntBASIC0.6□□□□□ -2.31
CPSF1Q10570 AC083875.1-201ENST00000419509 405 ntBASIC0.6□□□□□ -2.31
CPSF1Q10570 AC114737.2-201ENST00000421583 173 ntBASIC0.6□□□□□ -2.31
CPSF1Q10570 AC013410.2-201ENST00000422627 201 ntBASIC0.6□□□□□ -2.31
CPSF1Q10570 AC079776.3-201ENST00000450665 370 ntBASIC0.6□□□□□ -2.31
CPSF1Q10570 AC084024.2-201ENST00000503480 791 ntBASIC0.6□□□□□ -2.31
CPSF1Q10570 COPS8P3-201ENST00000526024 482 ntBASIC0.6□□□□□ -2.31
CPSF1Q10570 CENPUP1-201ENST00000526649 1202 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms