Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.06□□□□□ -1.76
SSRP1Q08945 AC017079.2-201ENST00000416102 485 ntBASIC4.06□□□□□ -1.76
SSRP1Q08945 AC006946.1-201ENST00000429106 328 ntBASIC4.06□□□□□ -1.76
SSRP1Q08945 CYCSP4-201ENST00000429682 331 ntBASIC4.06□□□□□ -1.76
SSRP1Q08945 AL357552.1-201ENST00000445254 415 ntBASIC4.06□□□□□ -1.76
SSRP1Q08945 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.06□□□□□ -1.76
SSRP1Q08945 AL163540.1-201ENST00000485382 386 ntBASIC4.06□□□□□ -1.76
SSRP1Q08945 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.06□□□□□ -1.76
SSRP1Q08945 SCARNA16.2-201ENST00000516520 172 ntBASIC4.06□□□□□ -1.76
SSRP1Q08945 RNA5SP384-201ENST00000516615 116 ntBASIC4.06□□□□□ -1.76
SSRP1Q08945 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.06□□□□□ -1.76
SSRP1Q08945 AL391261.3-201ENST00000557194 520 ntBASIC4.06□□□□□ -1.76
SSRP1Q08945 MTND4LP5-201ENST00000605152 292 ntBASIC4.06□□□□□ -1.76
SSRP1Q08945 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.06□□□□□ -1.76
SSRP1Q08945 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.06□□□□□ -1.76
SSRP1Q08945 MIR7851-201ENST00000610611 160 ntBASIC4.06□□□□□ -1.76
SSRP1Q08945 MIR6134-201ENST00000617606 109 ntBASIC4.06□□□□□ -1.76
SSRP1Q08945 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.06□□□□□ -1.76
SSRP1Q08945 AL034408.1-202ENST00000636088 415 ntBASIC4.06□□□□□ -1.76
SSRP1Q08945 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSRP1Q08945 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.06□□□□□ -1.76
SSRP1Q08945 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.06□□□□□ -1.76
SSRP1Q08945 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSRP1Q08945 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SSRP1Q08945 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
SSRP1Q08945 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSRP1Q08945 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.05□□□□□ -1.76
SSRP1Q08945 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.05□□□□□ -1.76
SSRP1Q08945 AC106871.1-201ENST00000568324 3102 ntBASIC4.05□□□□□ -1.76
SSRP1Q08945 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.05□□□□□ -1.76
SSRP1Q08945 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSRP1Q08945 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSRP1Q08945 RNU6-331P-201ENST00000384724 107 ntBASIC4.05□□□□□ -1.76
SSRP1Q08945 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SSRP1Q08945 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.05□□□□□ -1.76
SSRP1Q08945 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.05□□□□□ -1.76
SSRP1Q08945 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.05□□□□□ -1.76
SSRP1Q08945 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.05□□□□□ -1.76
SSRP1Q08945 U3.44-201ENST00000458938 192 ntBASIC4.05□□□□□ -1.76
SSRP1Q08945 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.05□□□□□ -1.76
SSRP1Q08945 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.05□□□□□ -1.76
SSRP1Q08945 RPS29P20-201ENST00000489592 171 ntBASIC4.05□□□□□ -1.76
SSRP1Q08945 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.05□□□□□ -1.76
SSRP1Q08945 AC005476.1-201ENST00000554427 397 ntBASIC4.05□□□□□ -1.76
SSRP1Q08945 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.05□□□□□ -1.76
SSRP1Q08945 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.05□□□□□ -1.76
SSRP1Q08945 MIR4444-1-201ENST00000581696 74 ntBASIC4.05□□□□□ -1.76
SSRP1Q08945 MIR4444-2-201ENST00000584390 74 ntBASIC4.05□□□□□ -1.76
SSRP1Q08945 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.05□□□□□ -1.76
SSRP1Q08945 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.05□□□□□ -1.76
SSRP1Q08945 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.05□□□□□ -1.76
SSRP1Q08945 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSRP1Q08945 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSRP1Q08945 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SSRP1Q08945 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.04□□□□□ -1.76
SSRP1Q08945 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SSRP1Q08945 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.04□□□□□ -1.76
SSRP1Q08945 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.04□□□□□ -1.76
SSRP1Q08945 RNU6-428P-201ENST00000362942 107 ntBASIC4.04□□□□□ -1.76
SSRP1Q08945 Y_RNA.216-201ENST00000364205 93 ntBASIC4.04□□□□□ -1.76
SSRP1Q08945 SNORA73.2-201ENST00000364946 201 ntBASIC4.04□□□□□ -1.76
SSRP1Q08945 RNU6-174P-201ENST00000410406 106 ntBASIC4.04□□□□□ -1.76
SSRP1Q08945 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.04□□□□□ -1.76
SSRP1Q08945 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.04□□□□□ -1.76
SSRP1Q08945 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.04□□□□□ -1.76
SSRP1Q08945 RPL23AP50-201ENST00000434149 455 ntBASIC4.04□□□□□ -1.76
SSRP1Q08945 HMGN2P7-201ENST00000456186 273 ntBASIC4.04□□□□□ -1.76
SSRP1Q08945 snoU13.28-201ENST00000459235 104 ntBASIC4.04□□□□□ -1.76
SSRP1Q08945 SNORA70.19-201ENST00000516717 90 ntBASIC4.04□□□□□ -1.76
SSRP1Q08945 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.04□□□□□ -1.76
SSRP1Q08945 MIR4644-201ENST00000579929 84 ntBASIC4.04□□□□□ -1.76
SSRP1Q08945 MIR3976-201ENST00000606807 139 ntBASIC4.04□□□□□ -1.76
SSRP1Q08945 AC005046.1-201ENST00000608515 625 ntBASIC4.04□□□□□ -1.76
SSRP1Q08945 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.04□□□□□ -1.76
SSRP1Q08945 AL138880.2-201ENST00000616214 239 ntBASIC4.04□□□□□ -1.76
SSRP1Q08945 AC068831.7-201ENST00000616954 363 ntBASIC4.04□□□□□ -1.76
SSRP1Q08945 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.04□□□□□ -1.76
SSRP1Q08945 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SSRP1Q08945 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SSRP1Q08945 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.03□□□□□ -1.76
SSRP1Q08945 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.03□□□□□ -1.76
SSRP1Q08945 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSRP1Q08945 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSRP1Q08945 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.03□□□□□ -1.76
SSRP1Q08945 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSRP1Q08945 MIR423-201ENST00000362201 94 ntBASIC4.03□□□□□ -1.76
SSRP1Q08945 Y_RNA.31-201ENST00000362574 102 ntBASIC4.03□□□□□ -1.76
SSRP1Q08945 U8.8-201ENST00000365399 135 ntBASIC4.03□□□□□ -1.76
SSRP1Q08945 Y_RNA.422-201ENST00000384054 114 ntBASIC4.03□□□□□ -1.76
SSRP1Q08945 SNORA41-201ENST00000384675 132 ntBASIC4.03□□□□□ -1.76
SSRP1Q08945 PTMAP2-201ENST00000397627 327 ntBASIC4.03□□□□□ -1.76
SSRP1Q08945 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.03□□□□□ -1.76
SSRP1Q08945 PMCHL1-202ENST00000423102 261 ntBASIC4.03□□□□□ -1.76
SSRP1Q08945 GOT2P5-201ENST00000433995 546 ntBASIC4.03□□□□□ -1.76
SSRP1Q08945 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.03□□□□□ -1.76
SSRP1Q08945 SSXP4-201ENST00000451349 245 ntBASIC4.03□□□□□ -1.76
SSRP1Q08945 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.03□□□□□ -1.76
SSRP1Q08945 AC133134.1-201ENST00000466800 359 ntBASIC4.03□□□□□ -1.76
SSRP1Q08945 AC114801.2-201ENST00000503825 781 ntBASIC4.03□□□□□ -1.76
SSRP1Q08945 AC026784.1-201ENST00000507986 352 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms