Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AC009269.6-201ENST00000621778 588 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.22□□□□□ -2.21
HOXC5Q00444 TEX21P-201ENST00000447107 1476 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 AL161722.3-201ENST00000605789 2983 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
HOXC5Q00444 RNU5A-8P-201ENST00000364102 114 ntBASIC1.21□□□□□ -2.22
HOXC5Q00444 RNU6-413P-201ENST00000384115 107 ntBASIC1.21□□□□□ -2.22
HOXC5Q00444 RNU6-166P-201ENST00000384371 107 ntBASIC1.21□□□□□ -2.22
HOXC5Q00444 MIR186-201ENST00000384988 86 ntBASIC1.21□□□□□ -2.22
HOXC5Q00444 MIR758-201ENST00000390227 88 ntBASIC1.21□□□□□ -2.22
HOXC5Q00444 RNU6-278P-201ENST00000390945 109 ntBASIC1.21□□□□□ -2.22
HOXC5Q00444 RNA5SP465-201ENST00000391195 109 ntBASIC1.21□□□□□ -2.22
HOXC5Q00444 RNA5SP501-201ENST00000410990 112 ntBASIC1.21□□□□□ -2.22
HOXC5Q00444 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.21□□□□□ -2.22
HOXC5Q00444 AC016831.2-201ENST00000417179 352 ntBASIC1.21□□□□□ -2.22
HOXC5Q00444 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.21□□□□□ -2.22
HOXC5Q00444 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.21□□□□□ -2.22
HOXC5Q00444 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.21□□□□□ -2.22
HOXC5Q00444 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.21□□□□□ -2.22
HOXC5Q00444 PRELID3BP1-201ENST00000457142 540 ntBASIC1.21□□□□□ -2.22
HOXC5Q00444 RNU1-123P-201ENST00000458950 160 ntBASIC1.21□□□□□ -2.22
HOXC5Q00444 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.21□□□□□ -2.22
HOXC5Q00444 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.21□□□□□ -2.22
HOXC5Q00444 AC008834.1-201ENST00000511612 175 ntBASIC1.21□□□□□ -2.22
HOXC5Q00444 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.21□□□□□ -2.22
HOXC5Q00444 AP003168.1-201ENST00000530091 307 ntBASIC1.21□□□□□ -2.22
HOXC5Q00444 MTCYBP33-201ENST00000575007 1130 ntBASIC1.21□□□□□ -2.22
HOXC5Q00444 AC096772.1-201ENST00000609146 564 ntBASIC1.21□□□□□ -2.22
HOXC5Q00444 AC021755.4-201ENST00000616620 456 ntBASIC1.21□□□□□ -2.22
HOXC5Q00444 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 ZNF209P-201ENST00000593450 2304 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
HOXC5Q00444 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
HOXC5Q00444 MIR424-201ENST00000362227 98 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 RNU6-661P-201ENST00000362409 107 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.2□□□□□ -2.22
HOXC5Q00444 U8.10-201ENST00000384260 133 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 SNORD14D-201ENST00000384390 87 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 MIR29C-201ENST00000385231 88 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 RNU6-817P-201ENST00000391083 104 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 SNORA40C-201ENST00000391285 128 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 MIR934-201ENST00000401241 83 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 RNU6-1025P-201ENST00000410629 104 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.2□□□□□ -2.22
HOXC5Q00444 HMGB1P31-201ENST00000437242 427 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 MED28P2-201ENST00000475771 317 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 AC004223.1-201ENST00000479840 271 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 MTND1P3-201ENST00000484956 952 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.2□□□□□ -2.22
HOXC5Q00444 AC109445.1-201ENST00000512356 383 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 AC117532.1-201ENST00000514638 323 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 RNU6-965P-201ENST00000516721 96 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 AP004247.1-201ENST00000531556 1289 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.2□□□□□ -2.22
HOXC5Q00444 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.2□□□□□ -2.22
HOXC5Q00444 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.2□□□□□ -2.22
HOXC5Q00444 AL161670.1-201ENST00000554348 137 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 BNIP3P30-201ENST00000601184 574 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 AL596327.1-201ENST00000603629 213 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
HOXC5Q00444 AC006338.1-201ENST00000618453 749 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.2□□□□□ -2.22
HOXC5Q00444 AP003476.1-201ENST00000623984 516 ntBASIC1.2□□□□□ -2.22
HOXC5Q00444 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.2□□□□□ -2.22
HOXC5Q00444 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.19□□□□□ -2.22
HOXC5Q00444 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
HOXC5Q00444 RNU6-743P-201ENST00000364151 106 ntBASIC1.19□□□□□ -2.22
HOXC5Q00444 SNORA4.3-201ENST00000365564 137 ntBASIC1.19□□□□□ -2.22
HOXC5Q00444 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
HOXC5Q00444 AL136310.1-201ENST00000404926 654 ntBASIC1.19□□□□□ -2.22
HOXC5Q00444 RNU4-62P-201ENST00000410125 130 ntBASIC1.19□□□□□ -2.22
HOXC5Q00444 RN7SKP266-201ENST00000410232 287 ntBASIC1.19□□□□□ -2.22
HOXC5Q00444 RNU2-41P-201ENST00000410991 178 ntBASIC1.19□□□□□ -2.22
HOXC5Q00444 EIF4EP2-201ENST00000422816 654 ntBASIC1.19□□□□□ -2.22
HOXC5Q00444 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.19□□□□□ -2.22
HOXC5Q00444 SDAD1P3-201ENST00000427380 333 ntBASIC1.19□□□□□ -2.22
HOXC5Q00444 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.19□□□□□ -2.22
HOXC5Q00444 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.19□□□□□ -2.22
HOXC5Q00444 FDX1P2-201ENST00000450769 375 ntBASIC1.19□□□□□ -2.22
HOXC5Q00444 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.19□□□□□ -2.22
HOXC5Q00444 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.19□□□□□ -2.22
HOXC5Q00444 AC109927.2-201ENST00000506416 303 ntBASIC1.19□□□□□ -2.22
HOXC5Q00444 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
HOXC5Q00444 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.19□□□□□ -2.22
HOXC5Q00444 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.19□□□□□ -2.22
HOXC5Q00444 AC009712.1-201ENST00000564938 316 ntBASIC1.19□□□□□ -2.22
HOXC5Q00444 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.19□□□□□ -2.22
HOXC5Q00444 AC025754.2-201ENST00000606491 432 ntBASIC1.19□□□□□ -2.22
HOXC5Q00444 AC116312.1-201ENST00000606841 314 ntBASIC1.19□□□□□ -2.22
HOXC5Q00444 AC098614.4-201ENST00000607601 462 ntBASIC1.19□□□□□ -2.22
HOXC5Q00444 AC012360.2-201ENST00000609349 391 ntBASIC1.19□□□□□ -2.22
HOXC5Q00444 AC130324.3-201ENST00000614165 542 ntBASIC1.19□□□□□ -2.22
HOXC5Q00444 AL121895.2-201ENST00000619558 447 ntBASIC1.19□□□□□ -2.22
HOXC5Q00444 MIR7843-201ENST00000622274 79 ntBASIC1.19□□□□□ -2.22
HOXC5Q00444 Y_RNA.192-201ENST00000363977 102 ntBASIC1.18□□□□□ -2.22
HOXC5Q00444 RNU6-1164P-201ENST00000364428 107 ntBASIC1.18□□□□□ -2.22
HOXC5Q00444 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.18□□□□□ -2.22
HOXC5Q00444 RNU6-546P-201ENST00000383991 107 ntBASIC1.18□□□□□ -2.22
HOXC5Q00444 RNU6-439P-201ENST00000384188 106 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms