Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC092573.2-201ENST00000434546 243 ntBASIC0.15□□□□□ -2.39
HSPG2P98160 AC023512.1-201ENST00000444513 499 ntBASIC0.15□□□□□ -2.39
HSPG2P98160 HSPE1P13-201ENST00000451143 297 ntBASIC0.15□□□□□ -2.39
HSPG2P98160 VPS26AP1-201ENST00000483197 979 ntBASIC0.15□□□□□ -2.39
HSPG2P98160 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.15□□□□□ -2.39
HSPG2P98160 AL590705.4-201ENST00000532209 134 ntBASIC0.15□□□□□ -2.39
HSPG2P98160 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.15□□□□□ -2.39
HSPG2P98160 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.15□□□□□ -2.39
HSPG2P98160 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.15□□□□□ -2.39
HSPG2P98160 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC0.15□□□□□ -2.39
HSPG2P98160 AC016925.2-201ENST00000605108 242 ntBASIC0.15□□□□□ -2.39
HSPG2P98160 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.15□□□□□ -2.39
HSPG2P98160 MTND4P8-201ENST00000514997 1362 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
HSPG2P98160 DSTNP4-201ENST00000399472 474 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.14□□□□□ -2.39
HSPG2P98160 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.14□□□□□ -2.39
HSPG2P98160 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.14□□□□□ -2.39
HSPG2P98160 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.14□□□□□ -2.39
HSPG2P98160 SCARNA15.2-201ENST00000516409 127 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 AC034114.1-201ENST00000520293 285 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 AC005832.3-201ENST00000537929 631 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 Pinc.1-201ENST00000616452 154 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.14□□□□□ -2.39
HSPG2P98160 RNU6-730P-201ENST00000383954 104 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 HMGB1P17-201ENST00000403495 628 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 AL139098.1-201ENST00000407291 389 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 RNA5SP451-201ENST00000410588 110 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 TRAPPC13P1-201ENST00000435991 1062 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 RPS20P24-201ENST00000457473 361 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 AP003049.1-201ENST00000529418 457 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 AL137246.1-201ENST00000607072 977 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 AP005229.2-201ENST00000609980 697 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 AC011155.2-201ENST00000623202 216 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 AC091965.5-201ENST00000624785 342 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.14□□□□□ -2.39
HSPG2P98160 SNORA50A-201ENST00000384225 134 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.14□□□□□ -2.39
HSPG2P98160 AC010099.3-201ENST00000423896 409 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.14□□□□□ -2.39
HSPG2P98160 RPL7P29-201ENST00000437151 728 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 RSU1P2-202ENST00000437884 485 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 AC104629.2-201ENST00000468627 598 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.14□□□□□ -2.39
HSPG2P98160 AC006199.1-201ENST00000548728 219 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
HSPG2P98160 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.14□□□□□ -2.39
HSPG2P98160 AP001180.6-201ENST00000584918 159 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 U4.2-201ENST00000618561 85 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 AL049641.1-201ENST00000441055 1948 ntBASIC0.14□□□□□ -2.39
HSPG2P98160 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.13□□□□□ -2.39
HSPG2P98160 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
HSPG2P98160 RNU6-338P-201ENST00000383888 105 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
HSPG2P98160 MIR1290-201ENST00000408735 78 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 RNU2-36P-201ENST00000410361 191 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 RNU6-712P-201ENST00000410558 100 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 AL449283.1-202ENST00000418249 604 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 RPL31P53-201ENST00000457065 348 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 RPL21P47-201ENST00000483696 477 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 CR383656.7-201ENST00000548164 174 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 AL359212.1-201ENST00000556608 614 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 AC010738.1-201ENST00000604970 987 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 AC018638.7-201ENST00000605836 1114 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.13□□□□□ -2.39
HSPG2P98160 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
HSPG2P98160 RNY4P24-201ENST00000362735 96 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 RNU6-923P-201ENST00000364753 107 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 RNU4-78P-201ENST00000410940 126 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 AL160275.3-201ENST00000423876 471 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.13□□□□□ -2.39
HSPG2P98160 AL590383.1-201ENST00000428602 75 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 CR769776.1-201ENST00000441254 787 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 RAC1P7-201ENST00000445367 377 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 KATNBL1P6-201ENST00000453433 915 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.13□□□□□ -2.39
HSPG2P98160 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.13□□□□□ -2.39
HSPG2P98160 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.13□□□□□ -2.39
HSPG2P98160 SNORA4.4-201ENST00000515921 135 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.13□□□□□ -2.39
HSPG2P98160 HAUS1P3-201ENST00000523909 662 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.13□□□□□ -2.39
HSPG2P98160 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.13□□□□□ -2.39
HSPG2P98160 ADAM3B-201ENST00000569937 840 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.13□□□□□ -2.39
HSPG2P98160 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.13□□□□□ -2.39
HSPG2P98160 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.13□□□□□ -2.39
HSPG2P98160 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.13□□□□□ -2.39
HSPG2P98160 RNU5A-1-201ENST00000362698 116 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 MIR19B1-201ENST00000384829 87 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 MIR1207-201ENST00000408249 87 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 AC009518.2-201ENST00000418056 731 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 RPL21P111-201ENST00000418453 477 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 TAAR7P-201ENST00000436141 242 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 AC026371.1-201ENST00000551867 419 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 AC090888.1-201ENST00000561335 1141 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 AL356432.3-201ENST00000568952 465 ntBASIC0.13□□□□□ -2.39
HSPG2P98160 AC105224.1-201ENST00000587055 421 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms