Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SNORA31.17-201ENST00000516953 127 ntBASIC1.32□□□□□ -2.2
TPM4P67936 RN7SKP256-201ENST00000517201 314 ntBASIC1.32□□□□□ -2.2
TPM4P67936 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.32□□□□□ -2.2
TPM4P67936 AC018630.3-201ENST00000542637 96 ntBASIC1.32□□□□□ -2.2
TPM4P67936 AL132657.2-201ENST00000564417 358 ntBASIC1.32□□□□□ -2.2
TPM4P67936 MIR3660-201ENST00000584845 100 ntBASIC1.32□□□□□ -2.2
TPM4P67936 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.32□□□□□ -2.2
TPM4P67936 AC012065.4-201ENST00000602445 679 ntBASIC1.32□□□□□ -2.2
TPM4P67936 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.32□□□□□ -2.2
TPM4P67936 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.32□□□□□ -2.2
TPM4P67936 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.32□□□□□ -2.2
TPM4P67936 HAUS6P2-201ENST00000433254 2404 ntBASIC1.31□□□□□ -2.2
TPM4P67936 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
TPM4P67936 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
TPM4P67936 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.31□□□□□ -2.2
TPM4P67936 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.31□□□□□ -2.2
TPM4P67936 NCOR1P3-201ENST00000420479 303 ntBASIC1.31□□□□□ -2.2
TPM4P67936 MTND5P25-201ENST00000430499 799 ntBASIC1.31□□□□□ -2.2
TPM4P67936 MTND4P15-201ENST00000437913 1033 ntBASIC1.31□□□□□ -2.2
TPM4P67936 AC132942.1-201ENST00000486753 483 ntBASIC1.31□□□□□ -2.2
TPM4P67936 AC002400.1-201ENST00000569310 726 ntBASIC1.31□□□□□ -2.2
TPM4P67936 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.31□□□□□ -2.2
TPM4P67936 AC093648.1-201ENST00000623546 606 ntBASIC1.31□□□□□ -2.2
TPM4P67936 AP003476.1-201ENST00000623984 516 ntBASIC1.31□□□□□ -2.2
TPM4P67936 AL163152.1-201ENST00000642001 374 ntBASIC1.31□□□□□ -2.2
TPM4P67936 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.31□□□□□ -2.2
TPM4P67936 MTND5P33-201ENST00000571250 1450 ntBASIC1.31□□□□□ -2.2
TPM4P67936 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
TPM4P67936 RNU6-271P-201ENST00000363858 105 ntBASIC1.3□□□□□ -2.2
TPM4P67936 RNU6-944P-201ENST00000364023 107 ntBASIC1.3□□□□□ -2.2
TPM4P67936 RNU4-91P-201ENST00000364778 135 ntBASIC1.3□□□□□ -2.2
TPM4P67936 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
TPM4P67936 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.3□□□□□ -2.2
TPM4P67936 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.3□□□□□ -2.2
TPM4P67936 AL035666.1-201ENST00000446195 348 ntBASIC1.3□□□□□ -2.2
TPM4P67936 RPS29P28-201ENST00000446439 141 ntBASIC1.3□□□□□ -2.2
TPM4P67936 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.3□□□□□ -2.2
TPM4P67936 SNORD97-201ENST00000459187 142 ntBASIC1.3□□□□□ -2.2
TPM4P67936 AC010409.1-201ENST00000487382 476 ntBASIC1.3□□□□□ -2.2
TPM4P67936 AC005668.1-201ENST00000571142 476 ntBASIC1.3□□□□□ -2.2
TPM4P67936 VN1R83P-201ENST00000595685 445 ntBASIC1.3□□□□□ -2.2
TPM4P67936 AL358072.1-201ENST00000604156 575 ntBASIC1.3□□□□□ -2.2
TPM4P67936 AC073413.2-201ENST00000604332 360 ntBASIC1.3□□□□□ -2.2
TPM4P67936 BNIP3P19-201ENST00000605397 577 ntBASIC1.3□□□□□ -2.2
TPM4P67936 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.3□□□□□ -2.2
TPM4P67936 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TPM4P67936 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.29□□□□□ -2.2
TPM4P67936 AL589826.1-201ENST00000340697 249 ntBASIC1.29□□□□□ -2.2
TPM4P67936 RNU6-858P-201ENST00000362436 107 ntBASIC1.29□□□□□ -2.2
TPM4P67936 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.29□□□□□ -2.2
TPM4P67936 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
TPM4P67936 RNU6-166P-201ENST00000384371 107 ntBASIC1.29□□□□□ -2.2
TPM4P67936 RNU6-843P-201ENST00000384454 104 ntBASIC1.29□□□□□ -2.2
TPM4P67936 RNU6-817P-201ENST00000391083 104 ntBASIC1.29□□□□□ -2.2
TPM4P67936 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.29□□□□□ -2.2
TPM4P67936 AC092648.1-201ENST00000425870 423 ntBASIC1.29□□□□□ -2.2
TPM4P67936 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.29□□□□□ -2.2
TPM4P67936 USP9YP35-201ENST00000435696 412 ntBASIC1.29□□□□□ -2.2
TPM4P67936 RPS29P29-201ENST00000456396 171 ntBASIC1.29□□□□□ -2.2
TPM4P67936 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.29□□□□□ -2.2
TPM4P67936 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.29□□□□□ -2.2
TPM4P67936 RPS3AP4-201ENST00000555161 764 ntBASIC1.29□□□□□ -2.2
TPM4P67936 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.29□□□□□ -2.2
TPM4P67936 AC027807.1-201ENST00000559921 996 ntBASIC1.29□□□□□ -2.2
TPM4P67936 AC136618.2-201ENST00000575091 400 ntBASIC1.29□□□□□ -2.2
TPM4P67936 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.29□□□□□ -2.2
TPM4P67936 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.29□□□□□ -2.2
TPM4P67936 MIR3529-201ENST00000637713 78 ntBASIC1.29□□□□□ -2.2
TPM4P67936 AP000560.1-201ENST00000624150 1937 ntBASIC1.28□□□□□ -2.2
TPM4P67936 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.28□□□□□ -2.2
TPM4P67936 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
TPM4P67936 RNU6-655P-201ENST00000362858 107 ntBASIC1.28□□□□□ -2.2
TPM4P67936 RNU6-777P-201ENST00000364265 104 ntBASIC1.28□□□□□ -2.2
TPM4P67936 RNU6-487P-201ENST00000365430 104 ntBASIC1.28□□□□□ -2.2
TPM4P67936 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TPM4P67936 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TPM4P67936 RAC1P6-201ENST00000423911 575 ntBASIC1.28□□□□□ -2.2
TPM4P67936 MTCO3P5-201ENST00000433620 714 ntBASIC1.28□□□□□ -2.2
TPM4P67936 PAXBP1P1-201ENST00000449315 447 ntBASIC1.28□□□□□ -2.2
TPM4P67936 FDX1P2-201ENST00000450769 375 ntBASIC1.28□□□□□ -2.2
TPM4P67936 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.28□□□□□ -2.2
TPM4P67936 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.28□□□□□ -2.2
TPM4P67936 RNU6-965P-201ENST00000516721 96 ntBASIC1.28□□□□□ -2.2
TPM4P67936 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.28□□□□□ -2.2
TPM4P67936 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.28□□□□□ -2.2
TPM4P67936 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.28□□□□□ -2.2
TPM4P67936 DNAJC19P9-201ENST00000555084 351 ntBASIC1.28□□□□□ -2.2
TPM4P67936 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.28□□□□□ -2.2
TPM4P67936 AC023043.2-201ENST00000589678 1026 ntBASIC1.28□□□□□ -2.2
TPM4P67936 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.28□□□□□ -2.2
TPM4P67936 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.28□□□□□ -2.2
TPM4P67936 BNIP3P30-201ENST00000601184 574 ntBASIC1.28□□□□□ -2.2
TPM4P67936 AC123912.5-201ENST00000605470 343 ntBASIC1.28□□□□□ -2.2
TPM4P67936 AC104985.3-201ENST00000623479 597 ntBASIC1.28□□□□□ -2.2
TPM4P67936 AC092656.1-203ENST00000624134 423 ntBASIC1.28□□□□□ -2.2
TPM4P67936 AL136313.1-201ENST00000624804 202 ntBASIC1.28□□□□□ -2.2
TPM4P67936 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.28□□□□□ -2.2
TPM4P67936 RNU6-939P-201ENST00000384634 107 ntBASIC1.27□□□□□ -2.21
TPM4P67936 MIR301A-201ENST00000385261 86 ntBASIC1.27□□□□□ -2.21
TPM4P67936 RPS12P24-201ENST00000412619 387 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms