Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.4□□□□□ -1.87
RHBDL3P58872 AC097463.2-201ENST00000421074 142 ntBASIC3.4□□□□□ -1.87
RHBDL3P58872 CALM1P1-201ENST00000442082 433 ntBASIC3.4□□□□□ -1.87
RHBDL3P58872 AL121769.1-201ENST00000469473 401 ntBASIC3.4□□□□□ -1.87
RHBDL3P58872 RPL23AP11-201ENST00000475260 469 ntBASIC3.4□□□□□ -1.87
RHBDL3P58872 RPL37P25-201ENST00000507308 276 ntBASIC3.4□□□□□ -1.87
RHBDL3P58872 AC104383.1-201ENST00000530297 370 ntBASIC3.4□□□□□ -1.87
RHBDL3P58872 AC135279.1-201ENST00000543493 504 ntBASIC3.4□□□□□ -1.87
RHBDL3P58872 BNIP3P6-201ENST00000549284 499 ntBASIC3.4□□□□□ -1.87
RHBDL3P58872 AC025678.1-201ENST00000567861 338 ntBASIC3.4□□□□□ -1.87
RHBDL3P58872 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.4□□□□□ -1.87
RHBDL3P58872 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.4□□□□□ -1.87
RHBDL3P58872 AC007621.1-201ENST00000604544 437 ntBASIC3.4□□□□□ -1.87
RHBDL3P58872 AL021997.1-201ENST00000605757 193 ntBASIC3.4□□□□□ -1.87
RHBDL3P58872 U2.17-201ENST00000611454 95 ntBASIC3.4□□□□□ -1.87
RHBDL3P58872 AC010378.1-201ENST00000619270 362 ntBASIC3.4□□□□□ -1.87
RHBDL3P58872 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.4□□□□□ -1.87
RHBDL3P58872 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RHBDL3P58872 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.4□□□□□ -1.87
RHBDL3P58872 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
RHBDL3P58872 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.39□□□□□ -1.87
RHBDL3P58872 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RHBDL3P58872 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
RHBDL3P58872 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RHBDL3P58872 RNU6-942P-201ENST00000363002 107 ntBASIC3.39□□□□□ -1.87
RHBDL3P58872 Y_RNA.318-201ENST00000365131 97 ntBASIC3.39□□□□□ -1.87
RHBDL3P58872 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RHBDL3P58872 SNORD37.1-201ENST00000390968 65 ntBASIC3.39□□□□□ -1.87
RHBDL3P58872 AC068050.1-201ENST00000394891 380 ntBASIC3.39□□□□□ -1.87
RHBDL3P58872 MIR887-201ENST00000401258 79 ntBASIC3.39□□□□□ -1.87
RHBDL3P58872 AL606923.1-201ENST00000406616 190 ntBASIC3.39□□□□□ -1.87
RHBDL3P58872 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.39□□□□□ -1.87
RHBDL3P58872 RNU2-3P-201ENST00000410144 191 ntBASIC3.39□□□□□ -1.87
RHBDL3P58872 RNA5SP184-201ENST00000411071 108 ntBASIC3.39□□□□□ -1.87
RHBDL3P58872 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.39□□□□□ -1.87
RHBDL3P58872 MTCYBP8-201ENST00000422855 651 ntBASIC3.39□□□□□ -1.87
RHBDL3P58872 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.39□□□□□ -1.87
RHBDL3P58872 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.39□□□□□ -1.87
RHBDL3P58872 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.39□□□□□ -1.87
RHBDL3P58872 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.39□□□□□ -1.87
RHBDL3P58872 RNU2-69P-201ENST00000516061 100 ntBASIC3.39□□□□□ -1.87
RHBDL3P58872 AC069113.1-201ENST00000517763 267 ntBASIC3.39□□□□□ -1.87
RHBDL3P58872 AC079598.5-201ENST00000547460 117 ntBASIC3.39□□□□□ -1.87
RHBDL3P58872 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.39□□□□□ -1.87
RHBDL3P58872 MTCO3P23-201ENST00000561363 289 ntBASIC3.39□□□□□ -1.87
RHBDL3P58872 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.39□□□□□ -1.87
RHBDL3P58872 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.39□□□□□ -1.87
RHBDL3P58872 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.39□□□□□ -1.87
RHBDL3P58872 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
RHBDL3P58872 MIR449A-201ENST00000362113 91 ntBASIC3.38□□□□□ -1.87
RHBDL3P58872 RNU1-112P-201ENST00000364401 164 ntBASIC3.38□□□□□ -1.87
RHBDL3P58872 Y_RNA.324-201ENST00000365165 102 ntBASIC3.38□□□□□ -1.87
RHBDL3P58872 RNU5E-7P-201ENST00000365290 117 ntBASIC3.38□□□□□ -1.87
RHBDL3P58872 RNU6-1328P-201ENST00000410938 106 ntBASIC3.38□□□□□ -1.87
RHBDL3P58872 CYCSP33-201ENST00000414485 327 ntBASIC3.38□□□□□ -1.87
RHBDL3P58872 DLGAP5P1-201ENST00000430307 464 ntBASIC3.38□□□□□ -1.87
RHBDL3P58872 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.38□□□□□ -1.87
RHBDL3P58872 RPL7P54-201ENST00000438336 674 ntBASIC3.38□□□□□ -1.87
RHBDL3P58872 AC016691.1-201ENST00000441321 413 ntBASIC3.38□□□□□ -1.87
RHBDL3P58872 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.38□□□□□ -1.87
RHBDL3P58872 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.38□□□□□ -1.87
RHBDL3P58872 SNORA43.2-201ENST00000516652 128 ntBASIC3.38□□□□□ -1.87
RHBDL3P58872 AC109479.2-201ENST00000517842 174 ntBASIC3.38□□□□□ -1.87
RHBDL3P58872 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.38□□□□□ -1.87
RHBDL3P58872 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.38□□□□□ -1.87
RHBDL3P58872 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.38□□□□□ -1.87
RHBDL3P58872 AC090616.3-201ENST00000582184 217 ntBASIC3.38□□□□□ -1.87
RHBDL3P58872 BNIP3P30-201ENST00000601184 574 ntBASIC3.38□□□□□ -1.87
RHBDL3P58872 AC021646.1-201ENST00000605469 484 ntBASIC3.38□□□□□ -1.87
RHBDL3P58872 uc_338.34-201ENST00000617467 174 ntBASIC3.38□□□□□ -1.87
RHBDL3P58872 AC099654.12-201ENST00000639868 649 ntBASIC3.38□□□□□ -1.87
RHBDL3P58872 Z75746.1-201ENST00000440243 2080 ntBASIC3.38□□□□□ -1.87
RHBDL3P58872 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.38□□□□□ -1.87
RHBDL3P58872 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.37□□□□□ -1.87
RHBDL3P58872 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.37□□□□□ -1.87
RHBDL3P58872 AC135776.4-201ENST00000624300 1904 ntBASIC3.37□□□□□ -1.87
RHBDL3P58872 SNORD114-19-201ENST00000363072 75 ntBASIC3.37□□□□□ -1.87
RHBDL3P58872 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.37□□□□□ -1.87
RHBDL3P58872 AC245054.2-201ENST00000415639 319 ntBASIC3.37□□□□□ -1.87
RHBDL3P58872 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.37□□□□□ -1.87
RHBDL3P58872 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.37□□□□□ -1.87
RHBDL3P58872 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.37□□□□□ -1.87
RHBDL3P58872 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.37□□□□□ -1.87
RHBDL3P58872 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.37□□□□□ -1.87
RHBDL3P58872 AC105245.1-201ENST00000581934 244 ntBASIC3.37□□□□□ -1.87
RHBDL3P58872 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.37□□□□□ -1.87
RHBDL3P58872 Z69720.2-201ENST00000624755 279 ntBASIC3.37□□□□□ -1.87
RHBDL3P58872 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.37□□□□□ -1.87
RHBDL3P58872 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RHBDL3P58872 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
RHBDL3P58872 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
RHBDL3P58872 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RHBDL3P58872 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.36□□□□□ -1.87
RHBDL3P58872 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RHBDL3P58872 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RHBDL3P58872 OR56A5-201ENST00000340110 738 ntBASIC3.36□□□□□ -1.87
RHBDL3P58872 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RHBDL3P58872 SNORD116-20-201ENST00000384529 92 ntBASIC3.36□□□□□ -1.87
RHBDL3P58872 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RHBDL3P58872 AL138827.1-201ENST00000402666 306 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms