Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC108206.1-201ENST00000570186 4159 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CLDN20P56880 MAPK10-322ENST00000641485 4530 ntBASIC2.78□□□□□ -1.96
CLDN20P56880 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CLDN20P56880 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN20P56880 FAM35CP-201ENST00000554755 2470 ntBASIC2.77□□□□□ -1.97
CLDN20P56880 Y_RNA.279-201ENST00000364763 95 ntBASIC2.77□□□□□ -1.97
CLDN20P56880 Y_RNA.324-201ENST00000365165 102 ntBASIC2.77□□□□□ -1.97
CLDN20P56880 SNORA54-201ENST00000384281 123 ntBASIC2.77□□□□□ -1.97
CLDN20P56880 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN20P56880 AL513185.2-201ENST00000425543 193 ntBASIC2.77□□□□□ -1.97
CLDN20P56880 TOMM20P4-201ENST00000427861 435 ntBASIC2.77□□□□□ -1.97
CLDN20P56880 AL353572.1-201ENST00000442490 417 ntBASIC2.77□□□□□ -1.97
CLDN20P56880 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN20P56880 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN20P56880 HMGN2P10-201ENST00000448085 265 ntBASIC2.77□□□□□ -1.97
CLDN20P56880 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN20P56880 TBCAP3-201ENST00000512475 312 ntBASIC2.77□□□□□ -1.97
CLDN20P56880 SNORA19.2-201ENST00000516013 114 ntBASIC2.77□□□□□ -1.97
CLDN20P56880 AC009812.2-201ENST00000517657 457 ntBASIC2.77□□□□□ -1.97
CLDN20P56880 AC069113.1-201ENST00000517763 267 ntBASIC2.77□□□□□ -1.97
CLDN20P56880 AC090136.1-201ENST00000520009 240 ntBASIC2.77□□□□□ -1.97
CLDN20P56880 AP000763.2-201ENST00000540641 163 ntBASIC2.77□□□□□ -1.97
CLDN20P56880 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN20P56880 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.77□□□□□ -1.97
CLDN20P56880 MIR4325-201ENST00000583049 90 ntBASIC2.77□□□□□ -1.97
CLDN20P56880 AC011712.1-201ENST00000588959 234 ntBASIC2.77□□□□□ -1.97
CLDN20P56880 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.77□□□□□ -1.97
CLDN20P56880 AC078899.3-201ENST00000599065 212 ntBASIC2.77□□□□□ -1.97
CLDN20P56880 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN20P56880 AC093913.1-201ENST00000614178 329 ntBASIC2.77□□□□□ -1.97
CLDN20P56880 ATP5A1P2-202ENST00000616464 443 ntBASIC2.77□□□□□ -1.97
CLDN20P56880 AL136221.1-201ENST00000621449 509 ntBASIC2.77□□□□□ -1.97
CLDN20P56880 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CLDN20P56880 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN20P56880 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN20P56880 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CLDN20P56880 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
CLDN20P56880 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN20P56880 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
CLDN20P56880 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CLDN20P56880 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN20P56880 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.76□□□□□ -1.97
CLDN20P56880 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN20P56880 SNORD113-7-201ENST00000363762 77 ntBASIC2.76□□□□□ -1.97
CLDN20P56880 RNY3P14-201ENST00000384309 102 ntBASIC2.76□□□□□ -1.97
CLDN20P56880 SNORA26.7-201ENST00000391288 122 ntBASIC2.76□□□□□ -1.97
CLDN20P56880 RAP1BP3-201ENST00000407180 549 ntBASIC2.76□□□□□ -1.97
CLDN20P56880 RN7SKP220-201ENST00000410611 288 ntBASIC2.76□□□□□ -1.97
CLDN20P56880 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN20P56880 NDUFA5P4-201ENST00000436704 385 ntBASIC2.76□□□□□ -1.97
CLDN20P56880 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN20P56880 RPL39P40-201ENST00000445481 146 ntBASIC2.76□□□□□ -1.97
CLDN20P56880 MTND4P18-201ENST00000447010 465 ntBASIC2.76□□□□□ -1.97
CLDN20P56880 GSTA11P-201ENST00000452866 669 ntBASIC2.76□□□□□ -1.97
CLDN20P56880 BTF3P15-201ENST00000455606 336 ntBASIC2.76□□□□□ -1.97
CLDN20P56880 RPL27AP5-201ENST00000469428 449 ntBASIC2.76□□□□□ -1.97
CLDN20P56880 AC087884.1-201ENST00000469738 328 ntBASIC2.76□□□□□ -1.97
CLDN20P56880 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.76□□□□□ -1.97
CLDN20P56880 TRBVA-201ENST00000498804 316 ntBASIC2.76□□□□□ -1.97
CLDN20P56880 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN20P56880 RNU6-1069P-201ENST00000516612 133 ntBASIC2.76□□□□□ -1.97
CLDN20P56880 AL121579.1-201ENST00000555129 305 ntBASIC2.76□□□□□ -1.97
CLDN20P56880 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.76□□□□□ -1.97
CLDN20P56880 MTCO3P13-201ENST00000577757 781 ntBASIC2.76□□□□□ -1.97
CLDN20P56880 AL451007.1-201ENST00000595491 289 ntBASIC2.76□□□□□ -1.97
CLDN20P56880 AC005000.2-201ENST00000605468 310 ntBASIC2.76□□□□□ -1.97
CLDN20P56880 AC107871.2-201ENST00000612894 502 ntBASIC2.76□□□□□ -1.97
CLDN20P56880 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN20P56880 MIR6134-201ENST00000617606 109 ntBASIC2.76□□□□□ -1.97
CLDN20P56880 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.76□□□□□ -1.97
CLDN20P56880 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CLDN20P56880 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN20P56880 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CLDN20P56880 AL355596.1-201ENST00000565399 3996 ntBASIC2.75□□□□□ -1.97
CLDN20P56880 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.75□□□□□ -1.97
CLDN20P56880 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.75□□□□□ -1.97
CLDN20P56880 MIR22-201ENST00000362190 85 ntBASIC2.75□□□□□ -1.97
CLDN20P56880 Y_RNA.303-201ENST00000364998 94 ntBASIC2.75□□□□□ -1.97
CLDN20P56880 MIR518D-201ENST00000385014 87 ntBASIC2.75□□□□□ -1.97
CLDN20P56880 AL138885.1-201ENST00000405921 675 ntBASIC2.75□□□□□ -1.97
CLDN20P56880 SNORD88.1-201ENST00000408684 91 ntBASIC2.75□□□□□ -1.97
CLDN20P56880 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.75□□□□□ -1.97
CLDN20P56880 RNU6-1148P-201ENST00000410992 104 ntBASIC2.75□□□□□ -1.97
CLDN20P56880 PGBD4P6-201ENST00000421501 610 ntBASIC2.75□□□□□ -1.97
CLDN20P56880 AL365496.1-201ENST00000426885 215 ntBASIC2.75□□□□□ -1.97
CLDN20P56880 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.75□□□□□ -1.97
CLDN20P56880 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.75□□□□□ -1.97
CLDN20P56880 RPS15AP5-201ENST00000436276 388 ntBASIC2.75□□□□□ -1.97
CLDN20P56880 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.75□□□□□ -1.97
CLDN20P56880 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.75□□□□□ -1.97
CLDN20P56880 RNU7-66P-201ENST00000459469 62 ntBASIC2.75□□□□□ -1.97
CLDN20P56880 AC117503.1-201ENST00000472241 394 ntBASIC2.75□□□□□ -1.97
CLDN20P56880 RPS29P2-201ENST00000479278 136 ntBASIC2.75□□□□□ -1.97
CLDN20P56880 BTF3P12-201ENST00000519620 469 ntBASIC2.75□□□□□ -1.97
CLDN20P56880 AC022634.1-201ENST00000520765 532 ntBASIC2.75□□□□□ -1.97
CLDN20P56880 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.75□□□□□ -1.97
CLDN20P56880 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.75□□□□□ -1.97
CLDN20P56880 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.75□□□□□ -1.97
CLDN20P56880 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms