Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.68□□□□□ -2.14
CLDN18P56856 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.68□□□□□ -2.14
CLDN18P56856 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.68□□□□□ -2.14
CLDN18P56856 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.68□□□□□ -2.14
CLDN18P56856 AC011979.2-201ENST00000527568 352 ntBASIC1.68□□□□□ -2.14
CLDN18P56856 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.68□□□□□ -2.14
CLDN18P56856 AP000763.2-201ENST00000540641 163 ntBASIC1.68□□□□□ -2.14
CLDN18P56856 IMMP1LP2-201ENST00000552954 492 ntBASIC1.68□□□□□ -2.14
CLDN18P56856 DEFB122-202ENST00000569013 197 ntBASIC1.68□□□□□ -2.14
CLDN18P56856 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.68□□□□□ -2.14
CLDN18P56856 MIR3935-201ENST00000583472 104 ntBASIC1.68□□□□□ -2.14
CLDN18P56856 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.68□□□□□ -2.14
CLDN18P56856 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CLDN18P56856 BNIP3P40-201ENST00000596017 556 ntBASIC1.68□□□□□ -2.14
CLDN18P56856 AC011494.1-201ENST00000596454 237 ntBASIC1.68□□□□□ -2.14
CLDN18P56856 AL391813.2-201ENST00000609113 322 ntBASIC1.68□□□□□ -2.14
CLDN18P56856 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CLDN18P56856 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CLDN18P56856 RNA5SP212-201ENST00000391223 107 ntBASIC1.67□□□□□ -2.14
CLDN18P56856 RNU2-32P-201ENST00000411193 191 ntBASIC1.67□□□□□ -2.14
CLDN18P56856 MTCO2P21-201ENST00000419780 677 ntBASIC1.67□□□□□ -2.14
CLDN18P56856 RPL31P63-201ENST00000422565 375 ntBASIC1.67□□□□□ -2.14
CLDN18P56856 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.67□□□□□ -2.14
CLDN18P56856 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.67□□□□□ -2.14
CLDN18P56856 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.67□□□□□ -2.14
CLDN18P56856 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.67□□□□□ -2.14
CLDN18P56856 AC104058.1-201ENST00000448028 297 ntBASIC1.67□□□□□ -2.14
CLDN18P56856 SSXP1-201ENST00000453640 473 ntBASIC1.67□□□□□ -2.14
CLDN18P56856 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.67□□□□□ -2.14
CLDN18P56856 HMGB1P30-201ENST00000492455 606 ntBASIC1.67□□□□□ -2.14
CLDN18P56856 AC091965.2-201ENST00000512324 613 ntBASIC1.67□□□□□ -2.14
CLDN18P56856 AC105185.1-201ENST00000518705 535 ntBASIC1.67□□□□□ -2.14
CLDN18P56856 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.67□□□□□ -2.14
CLDN18P56856 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.67□□□□□ -2.14
CLDN18P56856 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.67□□□□□ -2.14
CLDN18P56856 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.67□□□□□ -2.14
CLDN18P56856 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.67□□□□□ -2.14
CLDN18P56856 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.67□□□□□ -2.14
CLDN18P56856 AC112187.2-201ENST00000604345 283 ntBASIC1.67□□□□□ -2.14
CLDN18P56856 AL158032.1-201ENST00000605401 106 ntBASIC1.67□□□□□ -2.14
CLDN18P56856 AC108747.1-201ENST00000609508 535 ntBASIC1.67□□□□□ -2.14
CLDN18P56856 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.67□□□□□ -2.14
CLDN18P56856 AC004908.3-201ENST00000610248 625 ntBASIC1.67□□□□□ -2.14
CLDN18P56856 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.67□□□□□ -2.14
CLDN18P56856 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.67□□□□□ -2.14
CLDN18P56856 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.67□□□□□ -2.14
CLDN18P56856 AL607023.1-201ENST00000620045 248 ntBASIC1.67□□□□□ -2.14
CLDN18P56856 AL359757.2-201ENST00000624309 274 ntBASIC1.67□□□□□ -2.14
CLDN18P56856 AP000720.1-201ENST00000625091 483 ntBASIC1.67□□□□□ -2.14
CLDN18P56856 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.67□□□□□ -2.14
CLDN18P56856 AL445984.1-201ENST00000637834 659 ntBASIC1.67□□□□□ -2.14
CLDN18P56856 AC009487.4-201ENST00000624969 3585 ntBASIC1.67□□□□□ -2.14
CLDN18P56856 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CLDN18P56856 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
CLDN18P56856 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CLDN18P56856 RNU6-1010P-201ENST00000362757 107 ntBASIC1.66□□□□□ -2.14
CLDN18P56856 MIR9-3-201ENST00000385084 90 ntBASIC1.66□□□□□ -2.14
CLDN18P56856 MIR29C-201ENST00000385231 88 ntBASIC1.66□□□□□ -2.14
CLDN18P56856 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CLDN18P56856 RNU11-3P-201ENST00000391111 133 ntBASIC1.66□□□□□ -2.14
CLDN18P56856 RPS20P2-201ENST00000402520 389 ntBASIC1.66□□□□□ -2.14
CLDN18P56856 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.66□□□□□ -2.14
CLDN18P56856 RPS15AP12-201ENST00000419498 388 ntBASIC1.66□□□□□ -2.14
CLDN18P56856 AL365338.1-201ENST00000422282 858 ntBASIC1.66□□□□□ -2.14
CLDN18P56856 RPL23AP30-201ENST00000432419 501 ntBASIC1.66□□□□□ -2.14
CLDN18P56856 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.66□□□□□ -2.14
CLDN18P56856 AL606517.1-201ENST00000446914 387 ntBASIC1.66□□□□□ -2.14
CLDN18P56856 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.66□□□□□ -2.14
CLDN18P56856 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.66□□□□□ -2.14
CLDN18P56856 RN7SL274P-201ENST00000492268 272 ntBASIC1.66□□□□□ -2.14
CLDN18P56856 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.66□□□□□ -2.14
CLDN18P56856 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.66□□□□□ -2.14
CLDN18P56856 AC107393.1-201ENST00000512403 346 ntBASIC1.66□□□□□ -2.14
CLDN18P56856 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.66□□□□□ -2.14
CLDN18P56856 AC109329.1-201ENST00000518744 317 ntBASIC1.66□□□□□ -2.14
CLDN18P56856 AP005660.1-201ENST00000522972 293 ntBASIC1.66□□□□□ -2.14
CLDN18P56856 CYCSP27-201ENST00000527643 293 ntBASIC1.66□□□□□ -2.14
CLDN18P56856 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.66□□□□□ -2.14
CLDN18P56856 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.66□□□□□ -2.14
CLDN18P56856 MIR4524B-201ENST00000581569 115 ntBASIC1.66□□□□□ -2.14
CLDN18P56856 BNIP3P25-201ENST00000596023 559 ntBASIC1.66□□□□□ -2.14
CLDN18P56856 AC108479.2-201ENST00000617314 601 ntBASIC1.66□□□□□ -2.14
CLDN18P56856 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CLDN18P56856 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CLDN18P56856 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CLDN18P56856 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
CLDN18P56856 RNU6-511P-201ENST00000363496 107 ntBASIC1.65□□□□□ -2.15
CLDN18P56856 RNU6-546P-201ENST00000383991 107 ntBASIC1.65□□□□□ -2.15
CLDN18P56856 RNU6-843P-201ENST00000384454 104 ntBASIC1.65□□□□□ -2.15
CLDN18P56856 RNU6-906P-201ENST00000384700 70 ntBASIC1.65□□□□□ -2.15
CLDN18P56856 Y_RNA.623-201ENST00000411128 95 ntBASIC1.65□□□□□ -2.15
CLDN18P56856 RPL7P54-201ENST00000438336 674 ntBASIC1.65□□□□□ -2.15
CLDN18P56856 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.65□□□□□ -2.15
CLDN18P56856 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CLDN18P56856 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.65□□□□□ -2.15
CLDN18P56856 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.65□□□□□ -2.15
CLDN18P56856 AP003392.2-201ENST00000527269 208 ntBASIC1.65□□□□□ -2.15
CLDN18P56856 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.65□□□□□ -2.15
CLDN18P56856 AC015712.3-201ENST00000559380 164 ntBASIC1.65□□□□□ -2.15
CLDN18P56856 MTCYBP33-201ENST00000575007 1130 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms