Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
GFRA1P56159 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
GFRA1P56159 AL353743.1-202ENST00000431724 1695 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
GFRA1P56159 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
GFRA1P56159 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
GFRA1P56159 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
GFRA1P56159 HAUS6P2-201ENST00000433254 2404 ntBASIC3.76□□□□□ -1.81
GFRA1P56159 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
GFRA1P56159 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
GFRA1P56159 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
GFRA1P56159 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.76□□□□□ -1.81
GFRA1P56159 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.76□□□□□ -1.81
GFRA1P56159 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
GFRA1P56159 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
GFRA1P56159 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.76□□□□□ -1.81
GFRA1P56159 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
GFRA1P56159 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.76□□□□□ -1.81
GFRA1P56159 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
GFRA1P56159 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
GFRA1P56159 Y_RNA.19-201ENST00000362462 99 ntBASIC3.76□□□□□ -1.81
GFRA1P56159 SNORD115-32-201ENST00000364079 82 ntBASIC3.76□□□□□ -1.81
GFRA1P56159 SNORD32A-201ENST00000364805 84 ntBASIC3.76□□□□□ -1.81
GFRA1P56159 RNU6-708P-201ENST00000384217 107 ntBASIC3.76□□□□□ -1.81
GFRA1P56159 RNU6-611P-201ENST00000384276 104 ntBASIC3.76□□□□□ -1.81
GFRA1P56159 MIR544A-201ENST00000384855 91 ntBASIC3.76□□□□□ -1.81
GFRA1P56159 AL356095.1-201ENST00000417217 199 ntBASIC3.76□□□□□ -1.81
GFRA1P56159 RPL23AP95-201ENST00000426806 265 ntBASIC3.76□□□□□ -1.81
GFRA1P56159 AC017037.1-201ENST00000508460 471 ntBASIC3.76□□□□□ -1.81
GFRA1P56159 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.76□□□□□ -1.81
GFRA1P56159 AC090617.3-201ENST00000573670 475 ntBASIC3.76□□□□□ -1.81
GFRA1P56159 AC022655.2-201ENST00000577280 318 ntBASIC3.76□□□□□ -1.81
GFRA1P56159 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.76□□□□□ -1.81
GFRA1P56159 AC010928.2-201ENST00000588017 287 ntBASIC3.76□□□□□ -1.81
GFRA1P56159 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.76□□□□□ -1.81
GFRA1P56159 MIR7151-201ENST00000617477 60 ntBASIC3.76□□□□□ -1.81
GFRA1P56159 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.76□□□□□ -1.81
GFRA1P56159 RNA5SP196-201ENST00000625967 102 ntBASIC3.76□□□□□ -1.81
GFRA1P56159 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
GFRA1P56159 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
GFRA1P56159 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
GFRA1P56159 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.75□□□□□ -1.81
GFRA1P56159 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.75□□□□□ -1.81
GFRA1P56159 Y_RNA.183-201ENST00000363882 113 ntBASIC3.75□□□□□ -1.81
GFRA1P56159 Y_RNA.222-201ENST00000364264 102 ntBASIC3.75□□□□□ -1.81
GFRA1P56159 Y_RNA.307-201ENST00000365022 117 ntBASIC3.75□□□□□ -1.81
GFRA1P56159 Y_RNA.489-201ENST00000384410 101 ntBASIC3.75□□□□□ -1.81
GFRA1P56159 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.75□□□□□ -1.81
GFRA1P56159 SDAD1P3-201ENST00000427380 333 ntBASIC3.75□□□□□ -1.81
GFRA1P56159 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.75□□□□□ -1.81
GFRA1P56159 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.75□□□□□ -1.81
GFRA1P56159 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.75□□□□□ -1.81
GFRA1P56159 RPL30P1-201ENST00000488676 339 ntBASIC3.75□□□□□ -1.81
GFRA1P56159 RN7SL604P-201ENST00000492589 296 ntBASIC3.75□□□□□ -1.81
GFRA1P56159 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.75□□□□□ -1.81
GFRA1P56159 AC091874.1-201ENST00000511402 339 ntBASIC3.75□□□□□ -1.81
GFRA1P56159 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.75□□□□□ -1.81
GFRA1P56159 RNU2-53P-201ENST00000516257 147 ntBASIC3.75□□□□□ -1.81
GFRA1P56159 Y_RNA.713-201ENST00000517013 96 ntBASIC3.75□□□□□ -1.81
GFRA1P56159 ACA59.2-201ENST00000517061 156 ntBASIC3.75□□□□□ -1.81
GFRA1P56159 SNORA31.23-201ENST00000517219 133 ntBASIC3.75□□□□□ -1.81
GFRA1P56159 MIR2116-201ENST00000517221 80 ntBASIC3.75□□□□□ -1.81
GFRA1P56159 AC007375.1-201ENST00000554513 578 ntBASIC3.75□□□□□ -1.81
GFRA1P56159 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.75□□□□□ -1.81
GFRA1P56159 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.75□□□□□ -1.81
GFRA1P56159 MIR6867-201ENST00000610636 67 ntBASIC3.75□□□□□ -1.81
GFRA1P56159 AC112484.5-201ENST00000624189 228 ntBASIC3.75□□□□□ -1.81
GFRA1P56159 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
GFRA1P56159 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
GFRA1P56159 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.75□□□□□ -1.81
GFRA1P56159 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
GFRA1P56159 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.74□□□□□ -1.81
GFRA1P56159 AC233263.6-201ENST00000631132 1963 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
GFRA1P56159 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.74□□□□□ -1.81
GFRA1P56159 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.74□□□□□ -1.81
GFRA1P56159 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
GFRA1P56159 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
GFRA1P56159 Y_RNA.64-201ENST00000362845 102 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 RNA5SP130-201ENST00000364431 114 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 RNU6-1141P-201ENST00000364520 107 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 RNA5SP479-201ENST00000364858 117 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 RNU6-17P-201ENST00000384245 107 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 RNU6-472P-201ENST00000384299 107 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 RNY3P4-201ENST00000384428 101 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 RNU6-843P-201ENST00000384454 104 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 Y_RNA.504-201ENST00000384481 104 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 RNU6-18P-201ENST00000384527 107 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 MIR32-201ENST00000384965 70 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 MIR153-2-201ENST00000385225 87 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.74□□□□□ -1.81
GFRA1P56159 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.74□□□□□ -1.81
GFRA1P56159 RPL23AP22-201ENST00000437556 453 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 SNORA71B-202ENST00000439232 272 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.74□□□□□ -1.81
GFRA1P56159 AC010469.1-201ENST00000463864 576 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 AC087477.1-201ENST00000465747 340 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 AC016632.1-201ENST00000503994 196 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 RNU6-408P-201ENST00000515910 100 ntBASIC3.74□□□□□ -1.81
GFRA1P56159 AC004944.1-201ENST00000517807 3059 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 194.8 ms