Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RNU7-182P-201ENST00000459009 62 ntBASIC2.11□□□□□ -2.07
LIM2P55344 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.11□□□□□ -2.07
LIM2P55344 AC117503.1-201ENST00000472241 394 ntBASIC2.11□□□□□ -2.07
LIM2P55344 AC104435.1-201ENST00000483483 166 ntBASIC2.11□□□□□ -2.07
LIM2P55344 MTAPP1-201ENST00000489154 819 ntBASIC2.11□□□□□ -2.07
LIM2P55344 AC008413.1-201ENST00000511864 177 ntBASIC2.11□□□□□ -2.07
LIM2P55344 AC112206.3-201ENST00000514578 389 ntBASIC2.11□□□□□ -2.07
LIM2P55344 AC117532.1-201ENST00000514638 323 ntBASIC2.11□□□□□ -2.07
LIM2P55344 RNU6-430P-201ENST00000517078 107 ntBASIC2.11□□□□□ -2.07
LIM2P55344 BTF3P12-201ENST00000519620 469 ntBASIC2.11□□□□□ -2.07
LIM2P55344 AP002770.2-201ENST00000543613 532 ntBASIC2.11□□□□□ -2.07
LIM2P55344 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.11□□□□□ -2.07
LIM2P55344 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.11□□□□□ -2.07
LIM2P55344 AL391840.1-201ENST00000571144 367 ntBASIC2.11□□□□□ -2.07
LIM2P55344 SNORD53-201ENST00000579969 78 ntBASIC2.11□□□□□ -2.07
LIM2P55344 MIR4765-201ENST00000585007 77 ntBASIC2.11□□□□□ -2.07
LIM2P55344 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.11□□□□□ -2.07
LIM2P55344 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.11□□□□□ -2.07
LIM2P55344 AC008121.1-201ENST00000603244 268 ntBASIC2.11□□□□□ -2.07
LIM2P55344 AC092656.1-203ENST00000624134 423 ntBASIC2.11□□□□□ -2.07
LIM2P55344 SCARNA4-202ENST00000625402 129 ntBASIC2.11□□□□□ -2.07
LIM2P55344 SEPT14P19-203ENST00000633205 211 ntBASIC2.11□□□□□ -2.07
LIM2P55344 U6.114-201ENST00000636407 96 ntBASIC2.11□□□□□ -2.07
LIM2P55344 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LIM2P55344 AL390237.1-201ENST00000404226 1415 ntBASIC2.1□□□□□ -2.07
LIM2P55344 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.1□□□□□ -2.07
LIM2P55344 AC138393.1-203ENST00000327086 343 ntBASIC2.1□□□□□ -2.07
LIM2P55344 RNU6-371P-201ENST00000364283 108 ntBASIC2.1□□□□□ -2.07
LIM2P55344 SNORD14B-201ENST00000364533 90 ntBASIC2.1□□□□□ -2.07
LIM2P55344 RNU1-91P-201ENST00000364746 163 ntBASIC2.1□□□□□ -2.07
LIM2P55344 RNU6-487P-201ENST00000365430 104 ntBASIC2.1□□□□□ -2.07
LIM2P55344 RNU6-898P-201ENST00000365627 104 ntBASIC2.1□□□□□ -2.07
LIM2P55344 RNU6-348P-201ENST00000384386 107 ntBASIC2.1□□□□□ -2.07
LIM2P55344 Y_RNA.576-201ENST00000384781 102 ntBASIC2.1□□□□□ -2.07
LIM2P55344 AL445529.1-201ENST00000398713 389 ntBASIC2.1□□□□□ -2.07
LIM2P55344 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LIM2P55344 AC007064.1-201ENST00000412238 351 ntBASIC2.1□□□□□ -2.07
LIM2P55344 OR6C66P-201ENST00000414917 930 ntBASIC2.1□□□□□ -2.07
LIM2P55344 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.1□□□□□ -2.07
LIM2P55344 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.1□□□□□ -2.07
LIM2P55344 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.1□□□□□ -2.07
LIM2P55344 AL583843.1-201ENST00000456070 346 ntBASIC2.1□□□□□ -2.07
LIM2P55344 KLF3P2-201ENST00000465138 268 ntBASIC2.1□□□□□ -2.07
LIM2P55344 FAM92A1P2-202ENST00000504766 877 ntBASIC2.1□□□□□ -2.07
LIM2P55344 MTND4P2-201ENST00000507767 1203 ntBASIC2.1□□□□□ -2.07
LIM2P55344 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.1□□□□□ -2.07
LIM2P55344 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.1□□□□□ -2.07
LIM2P55344 RNU6-581P-201ENST00000516214 105 ntBASIC2.1□□□□□ -2.07
LIM2P55344 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.1□□□□□ -2.07
LIM2P55344 AP004607.1-201ENST00000524456 203 ntBASIC2.1□□□□□ -2.07
LIM2P55344 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.1□□□□□ -2.07
LIM2P55344 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.1□□□□□ -2.07
LIM2P55344 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.1□□□□□ -2.07
LIM2P55344 AC009063.1-201ENST00000563342 702 ntBASIC2.1□□□□□ -2.07
LIM2P55344 AC092325.1-201ENST00000566449 554 ntBASIC2.1□□□□□ -2.07
LIM2P55344 MIR4528-201ENST00000577763 90 ntBASIC2.1□□□□□ -2.07
LIM2P55344 MIR4513-201ENST00000581077 86 ntBASIC2.1□□□□□ -2.07
LIM2P55344 MIR4775-201ENST00000581168 75 ntBASIC2.1□□□□□ -2.07
LIM2P55344 MIR4435-1-201ENST00000582552 80 ntBASIC2.1□□□□□ -2.07
LIM2P55344 AL670379.10-201ENST00000604330 253 ntBASIC2.1□□□□□ -2.07
LIM2P55344 AL670379.9-201ENST00000605428 253 ntBASIC2.1□□□□□ -2.07
LIM2P55344 RMST_4.1-201ENST00000616886 107 ntBASIC2.1□□□□□ -2.07
LIM2P55344 AL590808.1-201ENST00000618696 141 ntBASIC2.1□□□□□ -2.07
LIM2P55344 AC024581.2-201ENST00000619986 252 ntBASIC2.1□□□□□ -2.07
LIM2P55344 AC009831.4-201ENST00000620744 325 ntBASIC2.1□□□□□ -2.07
LIM2P55344 AC005609.4-201ENST00000625071 447 ntBASIC2.1□□□□□ -2.07
LIM2P55344 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.1□□□□□ -2.07
LIM2P55344 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
LIM2P55344 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LIM2P55344 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.09□□□□□ -2.07
LIM2P55344 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LIM2P55344 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LIM2P55344 MIRLET7G-201ENST00000362280 84 ntBASIC2.09□□□□□ -2.07
LIM2P55344 RNU6-181P-201ENST00000363225 107 ntBASIC2.09□□□□□ -2.07
LIM2P55344 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LIM2P55344 RAP1BP3-201ENST00000407180 549 ntBASIC2.09□□□□□ -2.07
LIM2P55344 RNU4-46P-201ENST00000410818 138 ntBASIC2.09□□□□□ -2.07
LIM2P55344 RNA5SP508-201ENST00000411327 119 ntBASIC2.09□□□□□ -2.07
LIM2P55344 AL139413.1-201ENST00000421309 217 ntBASIC2.09□□□□□ -2.07
LIM2P55344 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.09□□□□□ -2.07
LIM2P55344 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.09□□□□□ -2.07
LIM2P55344 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.09□□□□□ -2.07
LIM2P55344 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.09□□□□□ -2.07
LIM2P55344 FABP5P14-201ENST00000437273 393 ntBASIC2.09□□□□□ -2.07
LIM2P55344 AC132479.1-201ENST00000449160 144 ntBASIC2.09□□□□□ -2.07
LIM2P55344 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.09□□□□□ -2.07
LIM2P55344 AIG1P1-201ENST00000503376 148 ntBASIC2.09□□□□□ -2.07
LIM2P55344 RBBP4P6-201ENST00000508098 202 ntBASIC2.09□□□□□ -2.07
LIM2P55344 AC104806.1-201ENST00000508720 308 ntBASIC2.09□□□□□ -2.07
LIM2P55344 AC023141.11-201ENST00000508864 202 ntBASIC2.09□□□□□ -2.07
LIM2P55344 AC104136.1-201ENST00000512969 394 ntBASIC2.09□□□□□ -2.07
LIM2P55344 RNU6-445P-201ENST00000516949 107 ntBASIC2.09□□□□□ -2.07
LIM2P55344 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.09□□□□□ -2.07
LIM2P55344 AP002963.1-201ENST00000530590 184 ntBASIC2.09□□□□□ -2.07
LIM2P55344 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.09□□□□□ -2.07
LIM2P55344 AC079598.5-201ENST00000547460 117 ntBASIC2.09□□□□□ -2.07
LIM2P55344 AC012213.3-201ENST00000577199 777 ntBASIC2.09□□□□□ -2.07
LIM2P55344 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.09□□□□□ -2.07
LIM2P55344 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.09□□□□□ -2.07
LIM2P55344 MIR3529-201ENST00000637713 78 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 280.8 ms