Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4□□□□□ -1.77
EPHB4P54760 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
EPHB4P54760 RNU6-288P-201ENST00000363690 104 ntBASIC3.99□□□□□ -1.77
EPHB4P54760 Y_RNA.222-201ENST00000364264 102 ntBASIC3.99□□□□□ -1.77
EPHB4P54760 RNU6-283P-201ENST00000364788 107 ntBASIC3.99□□□□□ -1.77
EPHB4P54760 Y_RNA.350-201ENST00000365409 98 ntBASIC3.99□□□□□ -1.77
EPHB4P54760 AC110754.1-201ENST00000399740 601 ntBASIC3.99□□□□□ -1.77
EPHB4P54760 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.99□□□□□ -1.77
EPHB4P54760 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.99□□□□□ -1.77
EPHB4P54760 PGBD4P6-201ENST00000421501 610 ntBASIC3.99□□□□□ -1.77
EPHB4P54760 AL160275.3-201ENST00000423876 471 ntBASIC3.99□□□□□ -1.77
EPHB4P54760 UBE2V1P4-201ENST00000425374 344 ntBASIC3.99□□□□□ -1.77
EPHB4P54760 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.99□□□□□ -1.77
EPHB4P54760 AL645568.3-201ENST00000433683 316 ntBASIC3.99□□□□□ -1.77
EPHB4P54760 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.99□□□□□ -1.77
EPHB4P54760 CHEK2P4-201ENST00000450340 246 ntBASIC3.99□□□□□ -1.77
EPHB4P54760 RN7SL504P-201ENST00000494496 287 ntBASIC3.99□□□□□ -1.77
EPHB4P54760 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.99□□□□□ -1.77
EPHB4P54760 AC023141.12-201ENST00000512399 199 ntBASIC3.99□□□□□ -1.77
EPHB4P54760 AC007375.1-201ENST00000554513 578 ntBASIC3.99□□□□□ -1.77
EPHB4P54760 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.99□□□□□ -1.77
EPHB4P54760 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.99□□□□□ -1.77
EPHB4P54760 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.99□□□□□ -1.77
EPHB4P54760 AL355812.1-201ENST00000603215 216 ntBASIC3.99□□□□□ -1.77
EPHB4P54760 AC174048.1-201ENST00000603389 144 ntBASIC3.99□□□□□ -1.77
EPHB4P54760 MTND4LP5-201ENST00000605152 292 ntBASIC3.99□□□□□ -1.77
EPHB4P54760 AC233263.6-201ENST00000631132 1963 ntBASIC3.99□□□□□ -1.77
EPHB4P54760 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
EPHB4P54760 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
EPHB4P54760 AL353746.1-201ENST00000566293 6881 ntBASIC3.99□□□□□ -1.77
EPHB4P54760 AC010615.1-201ENST00000594254 1764 ntBASIC3.99□□□□□ -1.77
EPHB4P54760 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
EPHB4P54760 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
EPHB4P54760 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
EPHB4P54760 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
EPHB4P54760 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
EPHB4P54760 AL353743.1-202ENST00000431724 1695 ntBASIC3.98□□□□□ -1.77
EPHB4P54760 MT-TW-201ENST00000387382 68 ntBASIC3.98□□□□□ -1.77
EPHB4P54760 MIR1302-6-201ENST00000408466 90 ntBASIC3.98□□□□□ -1.77
EPHB4P54760 RNU2-64P-201ENST00000411315 191 ntBASIC3.98□□□□□ -1.77
EPHB4P54760 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.98□□□□□ -1.77
EPHB4P54760 AL353997.1-201ENST00000432936 108 ntBASIC3.98□□□□□ -1.77
EPHB4P54760 AL031274.1-201ENST00000450334 232 ntBASIC3.98□□□□□ -1.77
EPHB4P54760 RNU7-138P-201ENST00000459479 64 ntBASIC3.98□□□□□ -1.77
EPHB4P54760 RN7SL429P-201ENST00000479090 223 ntBASIC3.98□□□□□ -1.77
EPHB4P54760 RN7SL489P-201ENST00000486185 223 ntBASIC3.98□□□□□ -1.77
EPHB4P54760 RN7SL327P-201ENST00000488659 223 ntBASIC3.98□□□□□ -1.77
EPHB4P54760 AC022447.4-201ENST00000504053 364 ntBASIC3.98□□□□□ -1.77
EPHB4P54760 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.98□□□□□ -1.77
EPHB4P54760 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.98□□□□□ -1.77
EPHB4P54760 MIR3128-201ENST00000581957 66 ntBASIC3.98□□□□□ -1.77
EPHB4P54760 HMGN2P28-201ENST00000606102 262 ntBASIC3.98□□□□□ -1.77
EPHB4P54760 AC107294.1-201ENST00000609524 467 ntBASIC3.98□□□□□ -1.77
EPHB4P54760 RN7SL853P-201ENST00000617250 223 ntBASIC3.98□□□□□ -1.77
EPHB4P54760 AC006386.2-201ENST00000624491 75 ntBASIC3.98□□□□□ -1.77
EPHB4P54760 AC012005.1-201ENST00000624575 75 ntBASIC3.98□□□□□ -1.77
EPHB4P54760 MIR4272-201ENST00000635924 64 ntBASIC3.98□□□□□ -1.77
EPHB4P54760 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
EPHB4P54760 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
EPHB4P54760 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
EPHB4P54760 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
EPHB4P54760 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
EPHB4P54760 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
EPHB4P54760 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
EPHB4P54760 Y_RNA.48-201ENST00000362710 103 ntBASIC3.97□□□□□ -1.77
EPHB4P54760 Y_RNA.60-201ENST00000362831 98 ntBASIC3.97□□□□□ -1.77
EPHB4P54760 RNU6-263P-201ENST00000363811 107 ntBASIC3.97□□□□□ -1.77
EPHB4P54760 RNY3P11-201ENST00000364153 102 ntBASIC3.97□□□□□ -1.77
EPHB4P54760 Y_RNA.477-201ENST00000384352 108 ntBASIC3.97□□□□□ -1.77
EPHB4P54760 Y_RNA.483-201ENST00000384380 101 ntBASIC3.97□□□□□ -1.77
EPHB4P54760 MIR135A2-201ENST00000384854 100 ntBASIC3.97□□□□□ -1.77
EPHB4P54760 SNORD17-201ENST00000390930 237 ntBASIC3.97□□□□□ -1.77
EPHB4P54760 RNU2-38P-201ENST00000410856 79 ntBASIC3.97□□□□□ -1.77
EPHB4P54760 BX276092.3-201ENST00000424182 230 ntBASIC3.97□□□□□ -1.77
EPHB4P54760 PCMTD1P1-201ENST00000455560 355 ntBASIC3.97□□□□□ -1.77
EPHB4P54760 SNORD127-201ENST00000458892 86 ntBASIC3.97□□□□□ -1.77
EPHB4P54760 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.97□□□□□ -1.77
EPHB4P54760 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.97□□□□□ -1.77
EPHB4P54760 AC040926.1-201ENST00000530195 238 ntBASIC3.97□□□□□ -1.77
EPHB4P54760 AC008011.1-201ENST00000545989 227 ntBASIC3.97□□□□□ -1.77
EPHB4P54760 MIR4325-201ENST00000583049 90 ntBASIC3.97□□□□□ -1.77
EPHB4P54760 MIR5188-201ENST00000583467 113 ntBASIC3.97□□□□□ -1.77
EPHB4P54760 KLKP1-201ENST00000595979 403 ntBASIC3.97□□□□□ -1.77
EPHB4P54760 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.97□□□□□ -1.77
EPHB4P54760 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
EPHB4P54760 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
EPHB4P54760 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
EPHB4P54760 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.96□□□□□ -1.77
EPHB4P54760 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
EPHB4P54760 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
EPHB4P54760 RNA5SP167-201ENST00000365461 116 ntBASIC3.96□□□□□ -1.78
EPHB4P54760 RNU6-1329P-201ENST00000365664 107 ntBASIC3.96□□□□□ -1.78
EPHB4P54760 RNU6-14P-201ENST00000384630 106 ntBASIC3.96□□□□□ -1.78
EPHB4P54760 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
EPHB4P54760 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.96□□□□□ -1.78
EPHB4P54760 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.96□□□□□ -1.78
EPHB4P54760 AC073910.1-201ENST00000445047 438 ntBASIC3.96□□□□□ -1.78
EPHB4P54760 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.96□□□□□ -1.78
EPHB4P54760 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.96□□□□□ -1.78
EPHB4P54760 AC011005.2-201ENST00000487324 359 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms