Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
COPAP53621 RNU4-73P-201ENST00000363164 141 ntBASIC3.4□□□□□ -1.87
COPAP53621 RNU6-254P-201ENST00000363377 107 ntBASIC3.4□□□□□ -1.87
COPAP53621 MIR10A-201ENST00000385043 110 ntBASIC3.4□□□□□ -1.87
COPAP53621 MIR450B-201ENST00000401182 78 ntBASIC3.4□□□□□ -1.87
COPAP53621 AL357075.1-201ENST00000404107 726 ntBASIC3.4□□□□□ -1.87
COPAP53621 RPL5P18-201ENST00000406671 891 ntBASIC3.4□□□□□ -1.87
COPAP53621 NDUFS5P4-201ENST00000412983 318 ntBASIC3.4□□□□□ -1.87
COPAP53621 AL592148.1-201ENST00000413568 445 ntBASIC3.4□□□□□ -1.87
COPAP53621 CYCSP33-201ENST00000414485 327 ntBASIC3.4□□□□□ -1.87
COPAP53621 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.4□□□□□ -1.87
COPAP53621 SAR1AP4-201ENST00000429225 591 ntBASIC3.4□□□□□ -1.87
COPAP53621 AL627311.1-201ENST00000431514 115 ntBASIC3.4□□□□□ -1.87
COPAP53621 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.4□□□□□ -1.87
COPAP53621 MTATP6P7-201ENST00000453315 681 ntBASIC3.4□□□□□ -1.87
COPAP53621 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.4□□□□□ -1.87
COPAP53621 AC011005.2-201ENST00000487324 359 ntBASIC3.4□□□□□ -1.87
COPAP53621 RPS29P20-201ENST00000489592 171 ntBASIC3.4□□□□□ -1.87
COPAP53621 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.4□□□□□ -1.87
COPAP53621 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.4□□□□□ -1.87
COPAP53621 RNU6-256P-201ENST00000516747 97 ntBASIC3.4□□□□□ -1.87
COPAP53621 RNU6-1183P-201ENST00000517054 60 ntBASIC3.4□□□□□ -1.87
COPAP53621 SNORA31.26-201ENST00000517250 137 ntBASIC3.4□□□□□ -1.87
COPAP53621 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.4□□□□□ -1.87
COPAP53621 AC068657.1-201ENST00000520807 306 ntBASIC3.4□□□□□ -1.87
COPAP53621 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
COPAP53621 AC005476.1-201ENST00000554427 397 ntBASIC3.4□□□□□ -1.87
COPAP53621 AL391261.3-201ENST00000557194 520 ntBASIC3.4□□□□□ -1.87
COPAP53621 MIR3942-201ENST00000585264 109 ntBASIC3.4□□□□□ -1.87
COPAP53621 AL645944.1-201ENST00000603857 493 ntBASIC3.4□□□□□ -1.87
COPAP53621 AL132765.2-201ENST00000610812 351 ntBASIC3.4□□□□□ -1.87
COPAP53621 uc_338.15-201ENST00000615470 191 ntBASIC3.4□□□□□ -1.87
COPAP53621 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.87
COPAP53621 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.39□□□□□ -1.87
COPAP53621 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COPAP53621 RNA5SP374-201ENST00000362939 125 ntBASIC3.39□□□□□ -1.87
COPAP53621 SNORD56.3-201ENST00000363507 71 ntBASIC3.39□□□□□ -1.87
COPAP53621 Y_RNA.184-201ENST00000363884 108 ntBASIC3.39□□□□□ -1.87
COPAP53621 SNORD14B-201ENST00000364533 90 ntBASIC3.39□□□□□ -1.87
COPAP53621 Y_RNA.324-201ENST00000365165 102 ntBASIC3.39□□□□□ -1.87
COPAP53621 RNU6-198P-201ENST00000384258 104 ntBASIC3.39□□□□□ -1.87
COPAP53621 RNU2-3P-201ENST00000410144 191 ntBASIC3.39□□□□□ -1.87
COPAP53621 AC096664.2-201ENST00000411843 406 ntBASIC3.39□□□□□ -1.87
COPAP53621 PGBD4P6-201ENST00000421501 610 ntBASIC3.39□□□□□ -1.87
COPAP53621 NDUFB1P2-201ENST00000449477 176 ntBASIC3.39□□□□□ -1.87
COPAP53621 AC128713.1-201ENST00000471495 306 ntBASIC3.39□□□□□ -1.87
COPAP53621 MTCO1P29-201ENST00000496868 288 ntBASIC3.39□□□□□ -1.87
COPAP53621 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.39□□□□□ -1.87
COPAP53621 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.39□□□□□ -1.87
COPAP53621 RNU6-1069P-201ENST00000516612 133 ntBASIC3.39□□□□□ -1.87
COPAP53621 RNU6-323P-201ENST00000521915 107 ntBASIC3.39□□□□□ -1.87
COPAP53621 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.39□□□□□ -1.87
COPAP53621 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.39□□□□□ -1.87
COPAP53621 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.39□□□□□ -1.87
COPAP53621 MIR5004-201ENST00000579078 107 ntBASIC3.39□□□□□ -1.87
COPAP53621 MIR5692C1-201ENST00000585309 91 ntBASIC3.39□□□□□ -1.87
COPAP53621 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.39□□□□□ -1.87
COPAP53621 AL161629.2-201ENST00000615347 275 ntBASIC3.39□□□□□ -1.87
COPAP53621 RMST_4.1-201ENST00000616886 107 ntBASIC3.39□□□□□ -1.87
COPAP53621 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COPAP53621 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.39□□□□□ -1.87
COPAP53621 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.39□□□□□ -1.87
COPAP53621 AC017071.1-201ENST00000564407 2204 ntBASIC3.39□□□□□ -1.87
COPAP53621 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
COPAP53621 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.38□□□□□ -1.87
COPAP53621 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
COPAP53621 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COPAP53621 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COPAP53621 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.38□□□□□ -1.87
COPAP53621 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
COPAP53621 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COPAP53621 RNU6-384P-201ENST00000364900 104 ntBASIC3.38□□□□□ -1.87
COPAP53621 Y_RNA.301-201ENST00000364990 103 ntBASIC3.38□□□□□ -1.87
COPAP53621 MIR34A-201ENST00000385130 110 ntBASIC3.38□□□□□ -1.87
COPAP53621 SNORA48.5-201ENST00000391143 135 ntBASIC3.38□□□□□ -1.87
COPAP53621 Z99755.1-201ENST00000414048 380 ntBASIC3.38□□□□□ -1.87
COPAP53621 MTND4P28-201ENST00000426217 387 ntBASIC3.38□□□□□ -1.87
COPAP53621 AC104332.2-201ENST00000429959 156 ntBASIC3.38□□□□□ -1.87
COPAP53621 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.38□□□□□ -1.87
COPAP53621 AMD1P1-201ENST00000457220 922 ntBASIC3.38□□□□□ -1.87
COPAP53621 AC087884.1-201ENST00000469738 328 ntBASIC3.38□□□□□ -1.87
COPAP53621 AC117503.1-201ENST00000472241 394 ntBASIC3.38□□□□□ -1.87
COPAP53621 Y_RNA.691-201ENST00000516611 103 ntBASIC3.38□□□□□ -1.87
COPAP53621 SCARNA13-201ENST00000516672 275 ntBASIC3.38□□□□□ -1.87
COPAP53621 SNORA25.17-201ENST00000517184 124 ntBASIC3.38□□□□□ -1.87
COPAP53621 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.38□□□□□ -1.87
COPAP53621 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.38□□□□□ -1.87
COPAP53621 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.38□□□□□ -1.87
COPAP53621 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.38□□□□□ -1.87
COPAP53621 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.38□□□□□ -1.87
COPAP53621 AL133216.2-202ENST00000634512 349 ntBASIC3.38□□□□□ -1.87
COPAP53621 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.38□□□□□ -1.87
COPAP53621 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COPAP53621 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COPAP53621 AC093010.3-201ENST00000570269 15214 ntBASIC3.37□□□□□ -1.87
COPAP53621 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
COPAP53621 GABRG2-229ENST00000641017 3628 ntBASIC3.37□□□□□ -1.87
COPAP53621 VN1R36P-201ENST00000414936 291 ntBASIC3.37□□□□□ -1.87
COPAP53621 AL139396.1-201ENST00000421137 167 ntBASIC3.37□□□□□ -1.87
COPAP53621 HMGB1P9-201ENST00000429856 646 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms