Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 SCARNA15.1-201ENST00000516384 125 ntBASIC3.37□□□□□ -1.87
COPB1P53618 ATP5F1P5-201ENST00000526403 760 ntBASIC3.37□□□□□ -1.87
COPB1P53618 APOOP3-201ENST00000536787 586 ntBASIC3.37□□□□□ -1.87
COPB1P53618 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.37□□□□□ -1.87
COPB1P53618 IMMP1LP2-201ENST00000552954 492 ntBASIC3.37□□□□□ -1.87
COPB1P53618 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.37□□□□□ -1.87
COPB1P53618 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.37□□□□□ -1.87
COPB1P53618 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COPB1P53618 AC126177.8-201ENST00000618339 1015 ntBASIC3.37□□□□□ -1.87
COPB1P53618 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.37□□□□□ -1.87
COPB1P53618 AL365361.1-201ENST00000566942 3481 ntBASIC3.37□□□□□ -1.87
COPB1P53618 AC008568.2-201ENST00000623862 2313 ntBASIC3.37□□□□□ -1.87
COPB1P53618 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.37□□□□□ -1.87
COPB1P53618 RNU6-562P-201ENST00000362731 107 ntBASIC3.36□□□□□ -1.87
COPB1P53618 Y_RNA.315-201ENST00000365117 102 ntBASIC3.36□□□□□ -1.87
COPB1P53618 RNU6-128P-201ENST00000383976 107 ntBASIC3.36□□□□□ -1.87
COPB1P53618 RNU6-43P-201ENST00000384302 107 ntBASIC3.36□□□□□ -1.87
COPB1P53618 Y_RNA.480-201ENST00000384364 102 ntBASIC3.36□□□□□ -1.87
COPB1P53618 MIR301A-201ENST00000385261 86 ntBASIC3.36□□□□□ -1.87
COPB1P53618 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
COPB1P53618 SNORD67-201ENST00000390833 111 ntBASIC3.36□□□□□ -1.87
COPB1P53618 RNA5SP120-201ENST00000410900 112 ntBASIC3.36□□□□□ -1.87
COPB1P53618 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.36□□□□□ -1.87
COPB1P53618 MTCO2P12-201ENST00000427426 682 ntBASIC3.36□□□□□ -1.87
COPB1P53618 MYL8P-204ENST00000431574 518 ntBASIC3.36□□□□□ -1.87
COPB1P53618 AC244505.4-201ENST00000434905 287 ntBASIC3.36□□□□□ -1.87
COPB1P53618 SSXP5-201ENST00000443473 287 ntBASIC3.36□□□□□ -1.87
COPB1P53618 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.36□□□□□ -1.87
COPB1P53618 RNU7-152P-201ENST00000458982 64 ntBASIC3.36□□□□□ -1.87
COPB1P53618 RPS27P27-201ENST00000498779 255 ntBASIC3.36□□□□□ -1.87
COPB1P53618 AC079140.5-201ENST00000507882 310 ntBASIC3.36□□□□□ -1.87
COPB1P53618 RNU6-143P-201ENST00000516942 93 ntBASIC3.36□□□□□ -1.87
COPB1P53618 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.36□□□□□ -1.87
COPB1P53618 RNU6-323P-201ENST00000521915 107 ntBASIC3.36□□□□□ -1.87
COPB1P53618 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.36□□□□□ -1.87
COPB1P53618 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.36□□□□□ -1.87
COPB1P53618 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.36□□□□□ -1.87
COPB1P53618 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.36□□□□□ -1.87
COPB1P53618 TRAV37-201ENST00000553906 342 ntBASIC3.36□□□□□ -1.87
COPB1P53618 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.36□□□□□ -1.87
COPB1P53618 AL157871.3-201ENST00000557231 293 ntBASIC3.36□□□□□ -1.87
COPB1P53618 AC093249.1-201ENST00000567049 203 ntBASIC3.36□□□□□ -1.87
COPB1P53618 AC011471.1-201ENST00000585766 187 ntBASIC3.36□□□□□ -1.87
COPB1P53618 AC022432.1-201ENST00000595739 310 ntBASIC3.36□□□□□ -1.87
COPB1P53618 AL627309.6-201ENST00000606857 840 ntBASIC3.36□□□□□ -1.87
COPB1P53618 AL031601.2-202ENST00000622650 282 ntBASIC3.36□□□□□ -1.87
COPB1P53618 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COPB1P53618 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
COPB1P53618 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
COPB1P53618 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
COPB1P53618 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COPB1P53618 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COPB1P53618 AC073325.2-201ENST00000339545 159 ntBASIC3.35□□□□□ -1.87
COPB1P53618 SNORA7.4-201ENST00000384249 137 ntBASIC3.35□□□□□ -1.87
COPB1P53618 Y_RNA.579-201ENST00000390939 94 ntBASIC3.35□□□□□ -1.87
COPB1P53618 RNY4P36-201ENST00000391116 96 ntBASIC3.35□□□□□ -1.87
COPB1P53618 RNA5SP274-201ENST00000410484 108 ntBASIC3.35□□□□□ -1.87
COPB1P53618 ATG3P1-201ENST00000419507 911 ntBASIC3.35□□□□□ -1.87
COPB1P53618 AL139396.1-201ENST00000421137 167 ntBASIC3.35□□□□□ -1.87
COPB1P53618 TRIAP1P1-201ENST00000427062 225 ntBASIC3.35□□□□□ -1.87
COPB1P53618 SNAP23P1-201ENST00000433229 246 ntBASIC3.35□□□□□ -1.87
COPB1P53618 AL118496.2-201ENST00000448300 230 ntBASIC3.35□□□□□ -1.87
COPB1P53618 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.35□□□□□ -1.87
COPB1P53618 AC104472.2-201ENST00000469035 601 ntBASIC3.35□□□□□ -1.87
COPB1P53618 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.35□□□□□ -1.87
COPB1P53618 RN7SL633P-201ENST00000488974 297 ntBASIC3.35□□□□□ -1.87
COPB1P53618 AC110794.1-201ENST00000505816 425 ntBASIC3.35□□□□□ -1.87
COPB1P53618 HMGB3P15-201ENST00000507326 574 ntBASIC3.35□□□□□ -1.87
COPB1P53618 AC008716.1-201ENST00000511084 513 ntBASIC3.35□□□□□ -1.87
COPB1P53618 RPL39P5-202ENST00000512505 151 ntBASIC3.35□□□□□ -1.87
COPB1P53618 RNU1-86P-201ENST00000516108 154 ntBASIC3.35□□□□□ -1.87
COPB1P53618 RNU1-107P-201ENST00000516617 154 ntBASIC3.35□□□□□ -1.87
COPB1P53618 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.35□□□□□ -1.87
COPB1P53618 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.35□□□□□ -1.87
COPB1P53618 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.35□□□□□ -1.87
COPB1P53618 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
COPB1P53618 AL163153.1-201ENST00000554223 283 ntBASIC3.35□□□□□ -1.87
COPB1P53618 AL442663.2-201ENST00000554385 511 ntBASIC3.35□□□□□ -1.87
COPB1P53618 AC100830.2-201ENST00000581636 240 ntBASIC3.35□□□□□ -1.87
COPB1P53618 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.35□□□□□ -1.87
COPB1P53618 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.35□□□□□ -1.87
COPB1P53618 RMST_4.1-201ENST00000616886 107 ntBASIC3.35□□□□□ -1.87
COPB1P53618 AC098657.3-201ENST00000620434 263 ntBASIC3.35□□□□□ -1.87
COPB1P53618 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.35□□□□□ -1.87
COPB1P53618 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.35□□□□□ -1.87
COPB1P53618 AL355596.1-201ENST00000565399 3996 ntBASIC3.35□□□□□ -1.87
COPB1P53618 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
COPB1P53618 AC007256.1-201ENST00000392253 2765 ntBASIC3.34□□□□□ -1.87
COPB1P53618 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
COPB1P53618 AL353743.1-202ENST00000431724 1695 ntBASIC3.34□□□□□ -1.87
COPB1P53618 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
COPB1P53618 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
COPB1P53618 AC138393.1-203ENST00000327086 343 ntBASIC3.34□□□□□ -1.87
COPB1P53618 Y_RNA.33-201ENST00000362591 102 ntBASIC3.34□□□□□ -1.87
COPB1P53618 Y_RNA.245-201ENST00000364493 95 ntBASIC3.34□□□□□ -1.87
COPB1P53618 Y_RNA.326-201ENST00000365176 113 ntBASIC3.34□□□□□ -1.87
COPB1P53618 SNORD42.2-201ENST00000365570 69 ntBASIC3.34□□□□□ -1.87
COPB1P53618 RNU6-741P-201ENST00000383889 107 ntBASIC3.34□□□□□ -1.87
COPB1P53618 Y_RNA.482-201ENST00000384377 111 ntBASIC3.34□□□□□ -1.87
COPB1P53618 SNORD15B-201ENST00000384714 146 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms