Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 SNORA16.1-201ENST00000364597 132 ntBASIC1.93□□□□□ -2.1
ACLYP53396 SNORA25.9-201ENST00000365087 128 ntBASIC1.93□□□□□ -2.1
ACLYP53396 Y_RNA.355-201ENST00000365462 98 ntBASIC1.93□□□□□ -2.1
ACLYP53396 RNU5E-6P-201ENST00000365574 115 ntBASIC1.93□□□□□ -2.1
ACLYP53396 RNU6-190P-201ENST00000384154 102 ntBASIC1.93□□□□□ -2.1
ACLYP53396 RNU6-166P-201ENST00000384371 107 ntBASIC1.93□□□□□ -2.1
ACLYP53396 RNA5SP338-201ENST00000410495 85 ntBASIC1.93□□□□□ -2.1
ACLYP53396 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.93□□□□□ -2.1
ACLYP53396 AC006366.1-201ENST00000422002 759 ntBASIC1.93□□□□□ -2.1
ACLYP53396 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.93□□□□□ -2.1
ACLYP53396 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.93□□□□□ -2.1
ACLYP53396 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.93□□□□□ -2.1
ACLYP53396 AL161788.1-201ENST00000441805 169 ntBASIC1.93□□□□□ -2.1
ACLYP53396 USP9YP15-201ENST00000442391 422 ntBASIC1.93□□□□□ -2.1
ACLYP53396 PSPHP1-201ENST00000450062 261 ntBASIC1.93□□□□□ -2.1
ACLYP53396 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.93□□□□□ -2.1
ACLYP53396 AC003071.1-201ENST00000451219 789 ntBASIC1.93□□□□□ -2.1
ACLYP53396 SSXP1-201ENST00000453640 473 ntBASIC1.93□□□□□ -2.1
ACLYP53396 AC093899.1-201ENST00000457984 376 ntBASIC1.93□□□□□ -2.1
ACLYP53396 AL139824.2-201ENST00000458731 1095 ntBASIC1.93□□□□□ -2.1
ACLYP53396 RNU5B-3P-201ENST00000516601 115 ntBASIC1.93□□□□□ -2.1
ACLYP53396 RNU6-678P-201ENST00000516832 109 ntBASIC1.93□□□□□ -2.1
ACLYP53396 RNU2-19P-201ENST00000517288 84 ntBASIC1.93□□□□□ -2.1
ACLYP53396 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.93□□□□□ -2.1
ACLYP53396 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.93□□□□□ -2.1
ACLYP53396 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.93□□□□□ -2.1
ACLYP53396 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.93□□□□□ -2.1
ACLYP53396 AC107952.2-201ENST00000606048 486 ntBASIC1.93□□□□□ -2.1
ACLYP53396 AC144521.1-201ENST00000607148 956 ntBASIC1.93□□□□□ -2.1
ACLYP53396 AL512598.1-201ENST00000610158 273 ntBASIC1.93□□□□□ -2.1
ACLYP53396 AC092106.3-201ENST00000611308 722 ntBASIC1.93□□□□□ -2.1
ACLYP53396 AC098657.3-201ENST00000620434 263 ntBASIC1.93□□□□□ -2.1
ACLYP53396 AL031601.2-202ENST00000622650 282 ntBASIC1.93□□□□□ -2.1
ACLYP53396 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.93□□□□□ -2.1
ACLYP53396 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.93□□□□□ -2.1
ACLYP53396 ZNF876P-202ENST00000398732 1485 ntBASIC1.93□□□□□ -2.1
ACLYP53396 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
ACLYP53396 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.92□□□□□ -2.1
ACLYP53396 Y_RNA.33-201ENST00000362591 102 ntBASIC1.92□□□□□ -2.1
ACLYP53396 Y_RNA.118-201ENST00000363300 101 ntBASIC1.92□□□□□ -2.1
ACLYP53396 RNY4P16-201ENST00000364768 94 ntBASIC1.92□□□□□ -2.1
ACLYP53396 SNORA4.3-201ENST00000365564 137 ntBASIC1.92□□□□□ -2.1
ACLYP53396 MIR95-201ENST00000385072 81 ntBASIC1.92□□□□□ -2.1
ACLYP53396 RNU2-40P-201ENST00000410833 196 ntBASIC1.92□□□□□ -2.1
ACLYP53396 AC127391.1-201ENST00000411737 98 ntBASIC1.92□□□□□ -2.1
ACLYP53396 AL356379.1-201ENST00000414105 126 ntBASIC1.92□□□□□ -2.1
ACLYP53396 AC092809.3-201ENST00000415453 231 ntBASIC1.92□□□□□ -2.1
ACLYP53396 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.92□□□□□ -2.1
ACLYP53396 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.92□□□□□ -2.1
ACLYP53396 AL160275.3-201ENST00000423876 471 ntBASIC1.92□□□□□ -2.1
ACLYP53396 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.92□□□□□ -2.1
ACLYP53396 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.92□□□□□ -2.1
ACLYP53396 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.92□□□□□ -2.1
ACLYP53396 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.92□□□□□ -2.1
ACLYP53396 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.92□□□□□ -2.1
ACLYP53396 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.92□□□□□ -2.1
ACLYP53396 RPL7P43-201ENST00000478876 753 ntBASIC1.92□□□□□ -2.1
ACLYP53396 AC107032.1-201ENST00000485945 480 ntBASIC1.92□□□□□ -2.1
ACLYP53396 RPS27P21-201ENST00000486977 252 ntBASIC1.92□□□□□ -2.1
ACLYP53396 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.92□□□□□ -2.1
ACLYP53396 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.92□□□□□ -2.1
ACLYP53396 PSMA3P-201ENST00000555485 635 ntBASIC1.92□□□□□ -2.1
ACLYP53396 ANP32BP3-201ENST00000559213 706 ntBASIC1.92□□□□□ -2.1
ACLYP53396 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.92□□□□□ -2.1
ACLYP53396 MIR4529-201ENST00000578110 78 ntBASIC1.92□□□□□ -2.1
ACLYP53396 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.92□□□□□ -2.1
ACLYP53396 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.92□□□□□ -2.1
ACLYP53396 MIR4448-201ENST00000584360 86 ntBASIC1.92□□□□□ -2.1
ACLYP53396 AL713866.2-201ENST00000603579 219 ntBASIC1.92□□□□□ -2.1
ACLYP53396 AC121334.2-201ENST00000605387 271 ntBASIC1.92□□□□□ -2.1
ACLYP53396 AC087045.1-201ENST00000605856 382 ntBASIC1.92□□□□□ -2.1
ACLYP53396 AC017037.3-201ENST00000625016 472 ntBASIC1.92□□□□□ -2.1
ACLYP53396 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
ACLYP53396 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
ACLYP53396 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.91□□□□□ -2.1
ACLYP53396 RNU6-946P-201ENST00000383878 107 ntBASIC1.91□□□□□ -2.1
ACLYP53396 FTH1P15-201ENST00000406984 280 ntBASIC1.91□□□□□ -2.1
ACLYP53396 U3.40-201ENST00000408706 208 ntBASIC1.91□□□□□ -2.1
ACLYP53396 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.91□□□□□ -2.1
ACLYP53396 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.91□□□□□ -2.1
ACLYP53396 HMGB1P31-201ENST00000437242 427 ntBASIC1.91□□□□□ -2.1
ACLYP53396 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.91□□□□□ -2.1
ACLYP53396 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ACLYP53396 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.91□□□□□ -2.1
ACLYP53396 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.91□□□□□ -2.1
ACLYP53396 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.91□□□□□ -2.1
ACLYP53396 AC116347.2-201ENST00000514912 523 ntBASIC1.91□□□□□ -2.1
ACLYP53396 RNU2-10P-201ENST00000516375 211 ntBASIC1.91□□□□□ -2.1
ACLYP53396 SNORA48.11-201ENST00000517015 89 ntBASIC1.91□□□□□ -2.1
ACLYP53396 AC022616.6-201ENST00000520479 119 ntBASIC1.91□□□□□ -2.1
ACLYP53396 AC107934.1-201ENST00000522215 217 ntBASIC1.91□□□□□ -2.1
ACLYP53396 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.91□□□□□ -2.1
ACLYP53396 AC087441.2-201ENST00000529141 262 ntBASIC1.91□□□□□ -2.1
ACLYP53396 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.91□□□□□ -2.1
ACLYP53396 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.91□□□□□ -2.1
ACLYP53396 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.91□□□□□ -2.1
ACLYP53396 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.91□□□□□ -2.1
ACLYP53396 MIR1273C-201ENST00000578669 77 ntBASIC1.91□□□□□ -2.1
ACLYP53396 MIR3935-201ENST00000583472 104 ntBASIC1.91□□□□□ -2.1
ACLYP53396 AC078899.2-201ENST00000595282 212 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 226 ms