Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SNORA25B-201ENST00000365507 128 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 MIR561-201ENST00000385216 97 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 HMGN2P39-201ENST00000398005 273 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 SNORA11.2-201ENST00000408318 127 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 RNU6-1140P-201ENST00000410517 106 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 SNORD56-201ENST00000413522 71 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.81□□□□□ -2.12
SLC1A1P43005 RPL23AP30-201ENST00000432419 501 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 AL645568.3-201ENST00000433683 316 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 MED28P2-201ENST00000475771 317 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 RPS29P21-201ENST00000496272 170 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.81□□□□□ -2.12
SLC1A1P43005 RNU7-51P-201ENST00000516560 62 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 RNA5SP137-201ENST00000516833 135 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.81□□□□□ -2.12
SLC1A1P43005 OR5B19P-201ENST00000531766 928 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.81□□□□□ -2.12
SLC1A1P43005 AC136619.2-201ENST00000563361 631 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 AC092325.1-201ENST00000566449 554 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 AL354943.1-201ENST00000572103 781 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 AL109918.3-201ENST00000603072 338 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 TUSC7.1-201ENST00000610969 165 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 AC008121.3-201ENST00000618726 433 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.81□□□□□ -2.12
SLC1A1P43005 AC024940.5-201ENST00000622889 474 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 AP006437.1-201ENST00000641440 3685 ntBASIC1.81□□□□□ -2.12
SLC1A1P43005 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SLC1A1P43005 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
SLC1A1P43005 RBBP8P1-201ENST00000449447 1844 ntBASIC1.8□□□□□ -2.12
SLC1A1P43005 SNORD114-19-201ENST00000363072 75 ntBASIC1.8□□□□□ -2.12
SLC1A1P43005 RPL23AP39-201ENST00000415533 405 ntBASIC1.8□□□□□ -2.12
SLC1A1P43005 AC138623.1-201ENST00000418060 216 ntBASIC1.8□□□□□ -2.12
SLC1A1P43005 AC008267.5-201ENST00000424928 265 ntBASIC1.8□□□□□ -2.12
SLC1A1P43005 AC018868.1-201ENST00000491307 315 ntBASIC1.8□□□□□ -2.12
SLC1A1P43005 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.8□□□□□ -2.12
SLC1A1P43005 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.8□□□□□ -2.12
SLC1A1P43005 MIR4287-201ENST00000579398 78 ntBASIC1.8□□□□□ -2.12
SLC1A1P43005 RPL30P11-203ENST00000598995 310 ntBASIC1.8□□□□□ -2.12
SLC1A1P43005 AC093788.1-201ENST00000609356 927 ntBASIC1.8□□□□□ -2.12
SLC1A1P43005 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.8□□□□□ -2.12
SLC1A1P43005 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.8□□□□□ -2.12
SLC1A1P43005 OR4G3P-201ENST00000633500 913 ntBASIC1.8□□□□□ -2.12
SLC1A1P43005 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.8□□□□□ -2.12
SLC1A1P43005 SNORD3E-201ENST00000362899 217 ntBASIC1.79□□□□□ -2.12
SLC1A1P43005 RNU1-57P-201ENST00000384491 166 ntBASIC1.79□□□□□ -2.12
SLC1A1P43005 RNU4-26P-201ENST00000410270 107 ntBASIC1.79□□□□□ -2.12
SLC1A1P43005 Y_RNA.623-201ENST00000411128 95 ntBASIC1.79□□□□□ -2.12
SLC1A1P43005 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.79□□□□□ -2.12
SLC1A1P43005 AL365338.1-201ENST00000422282 858 ntBASIC1.79□□□□□ -2.12
SLC1A1P43005 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.79□□□□□ -2.12
SLC1A1P43005 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.79□□□□□ -2.12
SLC1A1P43005 AL606662.1-201ENST00000445763 553 ntBASIC1.79□□□□□ -2.12
SLC1A1P43005 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.79□□□□□ -2.12
SLC1A1P43005 PMCHL2-203ENST00000457791 237 ntBASIC1.79□□□□□ -2.12
SLC1A1P43005 AC112204.1-201ENST00000502591 103 ntBASIC1.79□□□□□ -2.12
SLC1A1P43005 AC020699.1-201ENST00000505161 445 ntBASIC1.79□□□□□ -2.12
SLC1A1P43005 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.79□□□□□ -2.12
SLC1A1P43005 RNA5SP337-201ENST00000517007 109 ntBASIC1.79□□□□□ -2.12
SLC1A1P43005 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.79□□□□□ -2.12
SLC1A1P43005 AC034114.1-201ENST00000520293 285 ntBASIC1.79□□□□□ -2.12
SLC1A1P43005 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.79□□□□□ -2.12
SLC1A1P43005 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.79□□□□□ -2.12
SLC1A1P43005 MTCYBP33-201ENST00000575007 1130 ntBASIC1.79□□□□□ -2.12
SLC1A1P43005 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.79□□□□□ -2.12
SLC1A1P43005 BNIP3P30-201ENST00000601184 574 ntBASIC1.79□□□□□ -2.12
SLC1A1P43005 AC073410.2-201ENST00000603240 332 ntBASIC1.79□□□□□ -2.12
SLC1A1P43005 AL022154.1-201ENST00000604698 785 ntBASIC1.79□□□□□ -2.12
SLC1A1P43005 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.79□□□□□ -2.12
SLC1A1P43005 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
SLC1A1P43005 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SLC1A1P43005 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SLC1A1P43005 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.78□□□□□ -2.12
SLC1A1P43005 RNA5SP276-201ENST00000362580 94 ntBASIC1.78□□□□□ -2.12
SLC1A1P43005 SNORD114-1-201ENST00000362705 72 ntBASIC1.78□□□□□ -2.12
SLC1A1P43005 RNU6-1159P-201ENST00000362933 107 ntBASIC1.78□□□□□ -2.12
SLC1A1P43005 U3.13-201ENST00000364804 214 ntBASIC1.78□□□□□ -2.12
SLC1A1P43005 RNU6-533P-201ENST00000384144 107 ntBASIC1.78□□□□□ -2.12
SLC1A1P43005 MIR583-201ENST00000384846 75 ntBASIC1.78□□□□□ -2.12
SLC1A1P43005 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SLC1A1P43005 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SLC1A1P43005 RPS20P15-201ENST00000412792 311 ntBASIC1.78□□□□□ -2.12
SLC1A1P43005 OOSP1P1-201ENST00000423265 274 ntBASIC1.78□□□□□ -2.12
SLC1A1P43005 AC096920.1-201ENST00000423991 241 ntBASIC1.78□□□□□ -2.12
SLC1A1P43005 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.78□□□□□ -2.12
SLC1A1P43005 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.78□□□□□ -2.12
SLC1A1P43005 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.78□□□□□ -2.12
SLC1A1P43005 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SLC1A1P43005 snoU109.2-201ENST00000459316 135 ntBASIC1.78□□□□□ -2.12
SLC1A1P43005 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.78□□□□□ -2.12
SLC1A1P43005 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.78□□□□□ -2.12
SLC1A1P43005 AC092436.1-201ENST00000506450 503 ntBASIC1.78□□□□□ -2.12
SLC1A1P43005 SCARNA1-201ENST00000517138 166 ntBASIC1.78□□□□□ -2.12
SLC1A1P43005 RANP3-201ENST00000530970 276 ntBASIC1.78□□□□□ -2.12
SLC1A1P43005 AC091489.2-201ENST00000566263 604 ntBASIC1.78□□□□□ -2.12
SLC1A1P43005 DEFB122-202ENST00000569013 197 ntBASIC1.78□□□□□ -2.12
SLC1A1P43005 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.78□□□□□ -2.12
SLC1A1P43005 AP002360.4-201ENST00000606980 481 ntBASIC1.78□□□□□ -2.12
SLC1A1P43005 AC126118.1-201ENST00000607744 628 ntBASIC1.78□□□□□ -2.12
SLC1A1P43005 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms