Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.47□□□□□ -2.17
COL18A1P39060 SNRPEP10-201ENST00000420249 274 ntBASIC1.47□□□□□ -2.17
COL18A1P39060 AL109913.1-201ENST00000421173 514 ntBASIC1.47□□□□□ -2.17
COL18A1P39060 AIMP1P2-201ENST00000425294 312 ntBASIC1.47□□□□□ -2.17
COL18A1P39060 AL354685.2-201ENST00000448218 1447 ntBASIC1.47□□□□□ -2.17
COL18A1P39060 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.47□□□□□ -2.17
COL18A1P39060 AF213884.2-201ENST00000510417 903 ntBASIC1.47□□□□□ -2.17
COL18A1P39060 RNA5SP112-201ENST00000515937 99 ntBASIC1.47□□□□□ -2.17
COL18A1P39060 MIR892C-201ENST00000516410 77 ntBASIC1.47□□□□□ -2.17
COL18A1P39060 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
COL18A1P39060 CENPCP1-201ENST00000533085 2578 ntBASIC1.47□□□□□ -2.17
COL18A1P39060 AL121821.2-201ENST00000556081 394 ntBASIC1.47□□□□□ -2.17
COL18A1P39060 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.47□□□□□ -2.17
COL18A1P39060 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.47□□□□□ -2.17
COL18A1P39060 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.47□□□□□ -2.17
COL18A1P39060 RNU6-1284P-201ENST00000363701 100 ntBASIC1.46□□□□□ -2.18
COL18A1P39060 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.46□□□□□ -2.18
COL18A1P39060 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.46□□□□□ -2.18
COL18A1P39060 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.46□□□□□ -2.18
COL18A1P39060 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.46□□□□□ -2.18
COL18A1P39060 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.46□□□□□ -2.18
COL18A1P39060 AL161651.1-201ENST00000440882 223 ntBASIC1.46□□□□□ -2.18
COL18A1P39060 MTATP6P30-201ENST00000443540 664 ntBASIC1.46□□□□□ -2.18
COL18A1P39060 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.46□□□□□ -2.18
COL18A1P39060 snoU109.3-201ENST00000459477 145 ntBASIC1.46□□□□□ -2.18
COL18A1P39060 MRPS33P3-201ENST00000513456 322 ntBASIC1.46□□□□□ -2.18
COL18A1P39060 MIR514B-201ENST00000516774 80 ntBASIC1.46□□□□□ -2.18
COL18A1P39060 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.46□□□□□ -2.18
COL18A1P39060 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.46□□□□□ -2.18
COL18A1P39060 AL596327.1-201ENST00000603629 213 ntBASIC1.46□□□□□ -2.18
COL18A1P39060 AC091152.3-201ENST00000604227 325 ntBASIC1.46□□□□□ -2.18
COL18A1P39060 BNIP3P31-201ENST00000604515 566 ntBASIC1.46□□□□□ -2.18
COL18A1P39060 AL161798.1-201ENST00000604630 131 ntBASIC1.46□□□□□ -2.18
COL18A1P39060 AP001486.3-201ENST00000615334 372 ntBASIC1.46□□□□□ -2.18
COL18A1P39060 AC021755.4-201ENST00000616620 456 ntBASIC1.46□□□□□ -2.18
COL18A1P39060 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.46□□□□□ -2.18
COL18A1P39060 MIR5739-201ENST00000619803 80 ntBASIC1.46□□□□□ -2.18
COL18A1P39060 AL162373.1-201ENST00000620433 407 ntBASIC1.46□□□□□ -2.18
COL18A1P39060 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.46□□□□□ -2.18
COL18A1P39060 RNU6-37P-201ENST00000362692 107 ntBASIC1.45□□□□□ -2.18
COL18A1P39060 RNU6-486P-201ENST00000363116 107 ntBASIC1.45□□□□□ -2.18
COL18A1P39060 RNU5E-10P-201ENST00000363506 118 ntBASIC1.45□□□□□ -2.18
COL18A1P39060 RNU6-11P-201ENST00000364234 107 ntBASIC1.45□□□□□ -2.18
COL18A1P39060 RNY1P4-201ENST00000384595 115 ntBASIC1.45□□□□□ -2.18
COL18A1P39060 MIR19A-201ENST00000384878 82 ntBASIC1.45□□□□□ -2.18
COL18A1P39060 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
COL18A1P39060 MIR1305-201ENST00000408300 86 ntBASIC1.45□□□□□ -2.18
COL18A1P39060 PTGES3P4-201ENST00000426243 356 ntBASIC1.45□□□□□ -2.18
COL18A1P39060 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.45□□□□□ -2.18
COL18A1P39060 RPL36AP53-201ENST00000432891 316 ntBASIC1.45□□□□□ -2.18
COL18A1P39060 MTCO1P53-201ENST00000441633 699 ntBASIC1.45□□□□□ -2.18
COL18A1P39060 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.45□□□□□ -2.18
COL18A1P39060 RNA5SP476-201ENST00000516613 103 ntBASIC1.45□□□□□ -2.18
COL18A1P39060 UBE2L4-201ENST00000587688 464 ntBASIC1.45□□□□□ -2.18
COL18A1P39060 AC068276.1-201ENST00000605793 379 ntBASIC1.45□□□□□ -2.18
COL18A1P39060 SNORD14A-201ENST00000606526 91 ntBASIC1.45□□□□□ -2.18
COL18A1P39060 RBBP8P1-201ENST00000449447 1844 ntBASIC1.45□□□□□ -2.18
COL18A1P39060 RNU4-38P-201ENST00000364472 129 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 RNA5SP125-201ENST00000364843 120 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.44□□□□□ -2.18
COL18A1P39060 RNU6-658P-201ENST00000384606 106 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 RNA5SP465-201ENST00000391195 109 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 AL139397.2-201ENST00000404529 772 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 RPS3AP37-201ENST00000419176 745 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 AL022400.1-201ENST00000423946 935 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 AC104651.1-201ENST00000427559 735 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.44□□□□□ -2.18
COL18A1P39060 UBE2FP3-201ENST00000436366 524 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 AC005094.1-201ENST00000440420 368 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 EEF1A1P39-201ENST00000440791 250 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 GPM6BP3-201ENST00000442797 145 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 AC108059.3-201ENST00000456388 214 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.44□□□□□ -2.18
COL18A1P39060 RPL36AP48-201ENST00000485521 314 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 AC093852.1-201ENST00000503587 266 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.44□□□□□ -2.18
COL18A1P39060 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.44□□□□□ -2.18
COL18A1P39060 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
COL18A1P39060 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.44□□□□□ -2.18
COL18A1P39060 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.44□□□□□ -2.18
COL18A1P39060 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.44□□□□□ -2.18
COL18A1P39060 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.44□□□□□ -2.18
COL18A1P39060 AP001269.3-201ENST00000588718 329 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 BNIP3P9-201ENST00000603714 553 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 AL592221.1-201ENST00000605266 382 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 U4atac.1-201ENST00000618345 95 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
COL18A1P39060 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
COL18A1P39060 Y_RNA.192-201ENST00000363977 102 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 RNU6-777P-201ENST00000364265 104 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 RNU6-1280P-201ENST00000365211 107 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 SNORD116.1-201ENST00000365628 92 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 MIR147B-201ENST00000390185 80 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
COL18A1P39060 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.44□□□□□ -2.18
COL18A1P39060 AC097463.2-201ENST00000421074 142 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.44□□□□□ -2.18
COL18A1P39060 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.44□□□□□ -2.18
COL18A1P39060 AC010153.1-201ENST00000432862 727 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 AP000542.1-201ENST00000448473 371 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms