Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 Y_RNA.661-201ENST00000516003 99 ntBASIC3.56□□□□□ -1.84
PTPN7P35236 RN7SKP18-201ENST00000516005 275 ntBASIC3.56□□□□□ -1.84
PTPN7P35236 Y_RNA.720-201ENST00000517166 92 ntBASIC3.56□□□□□ -1.84
PTPN7P35236 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.56□□□□□ -1.84
PTPN7P35236 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PTPN7P35236 SUB1P3-201ENST00000564581 315 ntBASIC3.56□□□□□ -1.84
PTPN7P35236 ZNF192P1-203ENST00000565888 810 ntBASIC3.56□□□□□ -1.84
PTPN7P35236 AC008121.3-201ENST00000618726 433 ntBASIC3.56□□□□□ -1.84
PTPN7P35236 MIR6810-201ENST00000622701 70 ntBASIC3.56□□□□□ -1.84
PTPN7P35236 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.56□□□□□ -1.84
PTPN7P35236 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PTPN7P35236 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PTPN7P35236 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PTPN7P35236 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN7P35236 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN7P35236 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN7P35236 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN7P35236 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.55□□□□□ -1.84
PTPN7P35236 Y_RNA.133-201ENST00000363428 110 ntBASIC3.55□□□□□ -1.84
PTPN7P35236 AL513475.1-201ENST00000406602 315 ntBASIC3.55□□□□□ -1.84
PTPN7P35236 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.55□□□□□ -1.84
PTPN7P35236 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.55□□□□□ -1.84
PTPN7P35236 AL358176.2-201ENST00000425769 204 ntBASIC3.55□□□□□ -1.84
PTPN7P35236 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN7P35236 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN7P35236 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.55□□□□□ -1.84
PTPN7P35236 RBMY2UP-201ENST00000453474 324 ntBASIC3.55□□□□□ -1.84
PTPN7P35236 MTND5P22-201ENST00000458380 195 ntBASIC3.55□□□□□ -1.84
PTPN7P35236 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.55□□□□□ -1.84
PTPN7P35236 AC068781.1-201ENST00000488231 618 ntBASIC3.55□□□□□ -1.84
PTPN7P35236 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN7P35236 AC022447.4-201ENST00000504053 364 ntBASIC3.55□□□□□ -1.84
PTPN7P35236 AC021146.2-201ENST00000504736 556 ntBASIC3.55□□□□□ -1.84
PTPN7P35236 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN7P35236 Y_RNA.687-201ENST00000516558 91 ntBASIC3.55□□□□□ -1.84
PTPN7P35236 AC109479.2-201ENST00000517842 174 ntBASIC3.55□□□□□ -1.84
PTPN7P35236 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.55□□□□□ -1.84
PTPN7P35236 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN7P35236 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN7P35236 H3F3AP1-201ENST00000559984 334 ntBASIC3.55□□□□□ -1.84
PTPN7P35236 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.55□□□□□ -1.84
PTPN7P35236 MIR4644-201ENST00000579929 84 ntBASIC3.55□□□□□ -1.84
PTPN7P35236 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.55□□□□□ -1.84
PTPN7P35236 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.55□□□□□ -1.84
PTPN7P35236 VN1R85P-201ENST00000601587 426 ntBASIC3.55□□□□□ -1.84
PTPN7P35236 AC009314.1-201ENST00000603871 304 ntBASIC3.55□□□□□ -1.84
PTPN7P35236 AC006157.1-201ENST00000611750 366 ntBASIC3.55□□□□□ -1.84
PTPN7P35236 AC027309.3-201ENST00000623419 351 ntBASIC3.55□□□□□ -1.84
PTPN7P35236 AC073476.4-201ENST00000628409 72 ntBASIC3.55□□□□□ -1.84
PTPN7P35236 U6.99-201ENST00000637524 83 ntBASIC3.55□□□□□ -1.84
PTPN7P35236 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN7P35236 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN7P35236 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN7P35236 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN7P35236 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN7P35236 MTND5P16-201ENST00000460269 1703 ntBASIC3.55□□□□□ -1.84
PTPN7P35236 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN7P35236 AL672296.1-201ENST00000427780 2158 ntBASIC3.55□□□□□ -1.84
PTPN7P35236 AC022336.2-201ENST00000568966 2538 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PTPN7P35236 AC066616.2-201ENST00000559334 1481 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 AC007496.3-201ENST00000624987 3443 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
PTPN7P35236 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN7P35236 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
PTPN7P35236 TNPO1P3-201ENST00000436471 2662 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.54□□□□□ -1.84
PTPN7P35236 ZNF807-201ENST00000328088 1707 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN7P35236 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.54□□□□□ -1.84
PTPN7P35236 RNU1-115P-201ENST00000365329 160 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 Y_RNA.364-201ENST00000365532 101 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 RNU6-72P-201ENST00000384285 79 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 RNU6-1105P-201ENST00000384774 107 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 RNU6-985P-201ENST00000410182 104 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 AC126124.2-201ENST00000413542 321 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.54□□□□□ -1.84
PTPN7P35236 TOMM20P4-201ENST00000427861 435 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 RPS15AP10-201ENST00000432472 382 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.54□□□□□ -1.84
PTPN7P35236 MTATP6P7-201ENST00000453315 681 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 snoU109.2-201ENST00000459316 135 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 RPL21P104-201ENST00000464143 478 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 RPL23AP14-201ENST00000468281 468 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 ACA59.1-201ENST00000515966 143 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 RNU1-103P-201ENST00000516502 125 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 RNU6-1183P-201ENST00000517054 60 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.54□□□□□ -1.84
PTPN7P35236 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.54□□□□□ -1.84
PTPN7P35236 AC103996.1-201ENST00000555468 102 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.54□□□□□ -1.84
PTPN7P35236 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.54□□□□□ -1.84
PTPN7P35236 AC006557.5-201ENST00000603126 811 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 AP000942.4-201ENST00000604811 241 ntBASIC3.54□□□□□ -1.84
PTPN7P35236 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.54□□□□□ -1.84
PTPN7P35236 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
PTPN7P35236 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN7P35236 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.54□□□□□ -1.84
PTPN7P35236 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
PTPN7P35236 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms