Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC117522.1-201ENST00000509821 380 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 AC112206.3-201ENST00000514578 389 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 IGKV3-31-201ENST00000523109 329 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.02□□□□□ -2.09
SHMT2P34897 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.02□□□□□ -2.09
SHMT2P34897 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
SHMT2P34897 AC105245.1-201ENST00000581934 244 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 MIR4765-201ENST00000585007 77 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 AC090578.1-201ENST00000604955 591 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 AL121992.2-201ENST00000606262 256 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 AL139286.2-201ENST00000606838 396 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.02□□□□□ -2.09
SHMT2P34897 AC008250.2-201ENST00000615261 205 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 AC110994.2-201ENST00000635481 492 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.02□□□□□ -2.09
SHMT2P34897 KPNA2P1-201ENST00000458289 1591 ntBASIC2.02□□□□□ -2.09
SHMT2P34897 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.01□□□□□ -2.09
SHMT2P34897 RNY4P34-201ENST00000364779 95 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 RNU6-1280P-201ENST00000365211 107 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 RNU6-61P-201ENST00000365528 109 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 RNU4-52P-201ENST00000384209 138 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 RNU6-297P-201ENST00000384636 107 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 SNORA40.3-201ENST00000390964 122 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.01□□□□□ -2.09
SHMT2P34897 RNU6-195P-201ENST00000411352 109 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SHMT2P34897 AC016831.2-201ENST00000417179 352 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 MTND2P18-201ENST00000419962 1030 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.01□□□□□ -2.09
SHMT2P34897 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.01□□□□□ -2.09
SHMT2P34897 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.01□□□□□ -2.09
SHMT2P34897 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.01□□□□□ -2.09
SHMT2P34897 AL513124.1-201ENST00000450410 614 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SHMT2P34897 MTCYBP1-201ENST00000454315 1119 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 SNRPGP9-201ENST00000456025 225 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 AC080013.2-201ENST00000460866 323 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 MTCO2P6-201ENST00000463134 685 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 DYNLL1P5-201ENST00000467158 270 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 RPS27P21-201ENST00000486977 252 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 AC092436.1-201ENST00000506450 503 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 Vault.3-201ENST00000516676 95 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 AC090572.1-201ENST00000519251 160 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.01□□□□□ -2.09
SHMT2P34897 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.01□□□□□ -2.09
SHMT2P34897 AL158032.1-201ENST00000605401 106 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.01□□□□□ -2.09
SHMT2P34897 AC024581.2-201ENST00000619986 252 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.01□□□□□ -2.09
SHMT2P34897 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.01□□□□□ -2.09
SHMT2P34897 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SHMT2P34897 AC091931.1-201ENST00000623488 728 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 AC138627.2-201ENST00000624202 601 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 AL157786.1-207ENST00000627771 695 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SHMT2P34897 MTND4P1-201ENST00000457501 1466 ntBASIC2.01□□□□□ -2.09
SHMT2P34897 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2□□□□□ -2.09
SHMT2P34897 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2□□□□□ -2.09
SHMT2P34897 RNU6-486P-201ENST00000363116 107 ntBASIC2□□□□□ -2.09
SHMT2P34897 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SHMT2P34897 SNORA67.3-201ENST00000384366 140 ntBASIC2□□□□□ -2.09
SHMT2P34897 AL023284.1-201ENST00000403956 276 ntBASIC2□□□□□ -2.09
SHMT2P34897 AC127391.1-201ENST00000411737 98 ntBASIC2□□□□□ -2.09
SHMT2P34897 EEF1A1P40-201ENST00000412883 573 ntBASIC2□□□□□ -2.09
SHMT2P34897 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2□□□□□ -2.09
SHMT2P34897 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2□□□□□ -2.09
SHMT2P34897 MTATP6P16-201ENST00000434543 526 ntBASIC2□□□□□ -2.09
SHMT2P34897 AC073614.1-201ENST00000438690 650 ntBASIC2□□□□□ -2.09
SHMT2P34897 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2□□□□□ -2.09
SHMT2P34897 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2□□□□□ -2.09
SHMT2P34897 GAPDHP17-201ENST00000449858 1001 ntBASIC2□□□□□ -2.09
SHMT2P34897 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2□□□□□ -2.09
SHMT2P34897 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2□□□□□ -2.09
SHMT2P34897 SNORD42A-201ENST00000459584 64 ntBASIC2□□□□□ -2.09
SHMT2P34897 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2□□□□□ -2.09
SHMT2P34897 AC025033.1-201ENST00000463883 194 ntBASIC2□□□□□ -2.09
SHMT2P34897 AC011005.2-201ENST00000487324 359 ntBASIC2□□□□□ -2.09
SHMT2P34897 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2□□□□□ -2.09
SHMT2P34897 RNA5SP112-201ENST00000515937 99 ntBASIC2□□□□□ -2.09
SHMT2P34897 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2□□□□□ -2.09
SHMT2P34897 ADI1P3-201ENST00000549509 470 ntBASIC2□□□□□ -2.09
SHMT2P34897 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2□□□□□ -2.09
SHMT2P34897 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2□□□□□ -2.09
SHMT2P34897 AL138976.2-201ENST00000563989 694 ntBASIC2□□□□□ -2.09
SHMT2P34897 AC025678.1-201ENST00000567861 338 ntBASIC2□□□□□ -2.09
SHMT2P34897 MIR5571-201ENST00000577998 113 ntBASIC2□□□□□ -2.09
SHMT2P34897 DEFB131E-202ENST00000602581 683 ntBASIC2□□□□□ -2.09
SHMT2P34897 AC069294.1-201ENST00000608397 350 ntBASIC2□□□□□ -2.09
SHMT2P34897 AL133173.2-201ENST00000614270 90 ntBASIC2□□□□□ -2.09
SHMT2P34897 AC012640.5-201ENST00000623897 319 ntBASIC2□□□□□ -2.09
SHMT2P34897 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SHMT2P34897 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
SHMT2P34897 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
SHMT2P34897 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2□□□□□ -2.09
SHMT2P34897 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.99□□□□□ -2.09
SHMT2P34897 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 OR56A5-201ENST00000340110 738 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 MIR412-201ENST00000362142 91 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 RNU1-72P-201ENST00000362976 153 ntBASIC1.99□□□□□ -2.09
SHMT2P34897 SNORD14B-201ENST00000364533 90 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms