Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 AL590084.2-201ENST00000401481 382 ntBASIC0.8□□□□□ -2.28
SDC4P31431 MIR1267-201ENST00000408723 78 ntBASIC0.8□□□□□ -2.28
SDC4P31431 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.8□□□□□ -2.28
SDC4P31431 AL590623.1-201ENST00000427864 105 ntBASIC0.8□□□□□ -2.28
SDC4P31431 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.8□□□□□ -2.28
SDC4P31431 AC027119.1-201ENST00000440877 241 ntBASIC0.8□□□□□ -2.28
SDC4P31431 FABP5P15-201ENST00000453566 214 ntBASIC0.8□□□□□ -2.28
SDC4P31431 AC087477.1-201ENST00000465747 340 ntBASIC0.8□□□□□ -2.28
SDC4P31431 AC110760.3-202ENST00000515177 371 ntBASIC0.8□□□□□ -2.28
SDC4P31431 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.8□□□□□ -2.28
SDC4P31431 CENPUP1-201ENST00000526649 1202 ntBASIC0.8□□□□□ -2.28
SDC4P31431 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.8□□□□□ -2.28
SDC4P31431 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.8□□□□□ -2.28
SDC4P31431 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.8□□□□□ -2.28
SDC4P31431 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.8□□□□□ -2.28
SDC4P31431 AC109446.2-201ENST00000567872 497 ntBASIC0.8□□□□□ -2.28
SDC4P31431 AC136443.5-201ENST00000603741 370 ntBASIC0.8□□□□□ -2.28
SDC4P31431 AL161798.1-201ENST00000604630 131 ntBASIC0.8□□□□□ -2.28
SDC4P31431 AC034229.4-201ENST00000607861 441 ntBASIC0.8□□□□□ -2.28
SDC4P31431 AL133445.2-201ENST00000611191 527 ntBASIC0.8□□□□□ -2.28
SDC4P31431 MIR8070-201ENST00000616510 88 ntBASIC0.8□□□□□ -2.28
SDC4P31431 MIR8063-201ENST00000621930 81 ntBASIC0.8□□□□□ -2.28
SDC4P31431 AC019226.1-201ENST00000625666 515 ntBASIC0.8□□□□□ -2.28
SDC4P31431 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.8□□□□□ -2.28
SDC4P31431 RNU6-223P-201ENST00000362830 107 ntBASIC0.79□□□□□ -2.28
SDC4P31431 Y_RNA.234-201ENST00000364409 97 ntBASIC0.79□□□□□ -2.28
SDC4P31431 RNU6-707P-201ENST00000364647 95 ntBASIC0.79□□□□□ -2.28
SDC4P31431 SNORD1A-201ENST00000364968 72 ntBASIC0.79□□□□□ -2.28
SDC4P31431 SNORA29-201ENST00000384183 140 ntBASIC0.79□□□□□ -2.28
SDC4P31431 RNU2-32P-201ENST00000411193 191 ntBASIC0.79□□□□□ -2.28
SDC4P31431 RNU6-575P-201ENST00000411326 105 ntBASIC0.79□□□□□ -2.28
SDC4P31431 BTF3L4P3-201ENST00000418879 476 ntBASIC0.79□□□□□ -2.28
SDC4P31431 AL139421.1-201ENST00000423010 169 ntBASIC0.79□□□□□ -2.28
SDC4P31431 VN1R42P-201ENST00000424651 344 ntBASIC0.79□□□□□ -2.28
SDC4P31431 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.79□□□□□ -2.28
SDC4P31431 AC004941.2-201ENST00000427009 228 ntBASIC0.79□□□□□ -2.28
SDC4P31431 GPM6BP2-201ENST00000432046 144 ntBASIC0.79□□□□□ -2.28
SDC4P31431 RPL36AP53-201ENST00000432891 316 ntBASIC0.79□□□□□ -2.28
SDC4P31431 MTCO3P5-201ENST00000433620 714 ntBASIC0.79□□□□□ -2.28
SDC4P31431 USP9YP22-201ENST00000438971 294 ntBASIC0.79□□□□□ -2.28
SDC4P31431 GPM6BP1-201ENST00000446387 144 ntBASIC0.79□□□□□ -2.28
SDC4P31431 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.79□□□□□ -2.28
SDC4P31431 AC021382.1-201ENST00000483523 359 ntBASIC0.79□□□□□ -2.28
SDC4P31431 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.79□□□□□ -2.28
SDC4P31431 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.79□□□□□ -2.28
SDC4P31431 AC103851.1-201ENST00000506833 274 ntBASIC0.79□□□□□ -2.28
SDC4P31431 AC116655.1-201ENST00000508324 901 ntBASIC0.79□□□□□ -2.28
SDC4P31431 RNVU1-2-201ENST00000516326 135 ntBASIC0.79□□□□□ -2.28
SDC4P31431 LINC00557-201ENST00000563184 1279 ntBASIC0.79□□□□□ -2.28
SDC4P31431 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.79□□□□□ -2.28
SDC4P31431 CLIC4P2-201ENST00000601934 717 ntBASIC0.79□□□□□ -2.28
SDC4P31431 AC096772.1-201ENST00000609146 564 ntBASIC0.79□□□□□ -2.28
SDC4P31431 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.79□□□□□ -2.28
SDC4P31431 TUG1_2.1-201ENST00000614234 87 ntBASIC0.79□□□□□ -2.28
SDC4P31431 RNU6-414P-201ENST00000363705 104 ntBASIC0.78□□□□□ -2.28
SDC4P31431 Y_RNA.164-201ENST00000363709 102 ntBASIC0.78□□□□□ -2.28
SDC4P31431 RNU6-1280P-201ENST00000365211 107 ntBASIC0.78□□□□□ -2.28
SDC4P31431 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
SDC4P31431 RNU6-546P-201ENST00000383991 107 ntBASIC0.78□□□□□ -2.28
SDC4P31431 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
SDC4P31431 MTND1P21-201ENST00000412991 285 ntBASIC0.78□□□□□ -2.28
SDC4P31431 ISCA1P1-201ENST00000426679 387 ntBASIC0.78□□□□□ -2.28
SDC4P31431 AL035666.1-201ENST00000446195 348 ntBASIC0.78□□□□□ -2.28
SDC4P31431 OR6C5P-201ENST00000452388 923 ntBASIC0.78□□□□□ -2.28
SDC4P31431 AC010409.1-201ENST00000487382 476 ntBASIC0.78□□□□□ -2.28
SDC4P31431 AP006587.4-201ENST00000526053 529 ntBASIC0.78□□□□□ -2.28
SDC4P31431 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.78□□□□□ -2.28
SDC4P31431 TRAV32-201ENST00000553993 340 ntBASIC0.78□□□□□ -2.28
SDC4P31431 AC136619.2-201ENST00000563361 631 ntBASIC0.78□□□□□ -2.28
SDC4P31431 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.78□□□□□ -2.28
SDC4P31431 AC018630.2-201ENST00000534866 2403 ntBASIC0.77□□□□□ -2.29
SDC4P31431 RNU6-549P-201ENST00000384433 107 ntBASIC0.77□□□□□ -2.29
SDC4P31431 RNU6-1300P-201ENST00000391046 108 ntBASIC0.77□□□□□ -2.29
SDC4P31431 AC069282.1-201ENST00000411911 526 ntBASIC0.77□□□□□ -2.29
SDC4P31431 AC020550.1-201ENST00000447385 163 ntBASIC0.77□□□□□ -2.29
SDC4P31431 MTND5P8-201ENST00000449817 1083 ntBASIC0.77□□□□□ -2.29
SDC4P31431 RNU7-140P-201ENST00000459546 60 ntBASIC0.77□□□□□ -2.29
SDC4P31431 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.77□□□□□ -2.29
SDC4P31431 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.77□□□□□ -2.29
SDC4P31431 TMEM251P1-201ENST00000503717 318 ntBASIC0.77□□□□□ -2.29
SDC4P31431 RNU6-1183P-201ENST00000517054 60 ntBASIC0.77□□□□□ -2.29
SDC4P31431 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.77□□□□□ -2.29
SDC4P31431 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.77□□□□□ -2.29
SDC4P31431 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.77□□□□□ -2.29
SDC4P31431 AL731537.2-201ENST00000561565 951 ntBASIC0.77□□□□□ -2.29
SDC4P31431 SUB1P4-201ENST00000566062 339 ntBASIC0.77□□□□□ -2.29
SDC4P31431 FAM106DP-201ENST00000586416 501 ntBASIC0.77□□□□□ -2.29
SDC4P31431 AC107952.2-201ENST00000606048 486 ntBASIC0.77□□□□□ -2.29
SDC4P31431 AL583856.2-201ENST00000606298 543 ntBASIC0.77□□□□□ -2.29
SDC4P31431 AC098614.4-201ENST00000607601 462 ntBASIC0.77□□□□□ -2.29
SDC4P31431 MIR6504-201ENST00000613520 61 ntBASIC0.77□□□□□ -2.29
SDC4P31431 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SDC4P31431 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SDC4P31431 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
SDC4P31431 Y_RNA.99-201ENST00000363138 105 ntBASIC0.76□□□□□ -2.29
SDC4P31431 SNORD114-22-201ENST00000365423 72 ntBASIC0.76□□□□□ -2.29
SDC4P31431 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
SDC4P31431 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.76□□□□□ -2.29
SDC4P31431 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
SDC4P31431 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms