Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AC107294.3-201ENST00000609211 526 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 Z82243.1-201ENST00000609432 473 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 AC012409.4-201ENST00000612923 249 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 AC090617.7-201ENST00000623952 126 ntBASIC3.2□□□□□ -1.9
HOXA11P31270 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
HOXA11P31270 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.2□□□□□ -1.9
HOXA11P31270 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
HOXA11P31270 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
HOXA11P31270 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXA11P31270 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXA11P31270 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HOXA11P31270 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXA11P31270 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HOXA11P31270 RNU6-1287P-201ENST00000362914 107 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 RNA5SP383-201ENST00000362934 120 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 Y_RNA.135-201ENST00000363439 95 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 Y_RNA.138-201ENST00000363462 102 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 Y_RNA.373-201ENST00000365600 103 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HOXA11P31270 RNU6-1060P-201ENST00000384664 107 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 EIF4E2P1-201ENST00000393781 255 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 AL360182.1-201ENST00000397433 468 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 RN7SKP158-201ENST00000410453 326 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 POLHP1-201ENST00000411806 470 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXA11P31270 AL591704.1-201ENST00000432574 275 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 RPL23AP58-201ENST00000440453 469 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXA11P31270 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXA11P31270 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXA11P31270 RNA5SP367-201ENST00000516557 118 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 RNU6-1088P-201ENST00000516850 104 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 RN7SKP258-201ENST00000517151 304 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXA11P31270 AP003072.1-201ENST00000531740 145 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXA11P31270 AC090115.3-201ENST00000553218 849 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXA11P31270 AL161629.2-201ENST00000615347 275 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 uc_338.15-201ENST00000615470 191 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXA11P31270 AC134503.1-201ENST00000633048 54 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 AC096644.4-201ENST00000563417 2912 ntBASIC3.19□□□□□ -1.9
HOXA11P31270 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
HOXA11P31270 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXA11P31270 SNORD116-29-201ENST00000384516 83 ntBASIC3.18□□□□□ -1.9
HOXA11P31270 NDUFS5P1-201ENST00000405668 289 ntBASIC3.18□□□□□ -1.9
HOXA11P31270 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
HOXA11P31270 AC093106.2-201ENST00000428212 385 ntBASIC3.18□□□□□ -1.9
HOXA11P31270 AC010099.1-201ENST00000455434 375 ntBASIC3.18□□□□□ -1.9
HOXA11P31270 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXA11P31270 SCARNA18-201ENST00000459004 134 ntBASIC3.18□□□□□ -1.9
HOXA11P31270 AC083904.1-201ENST00000487828 231 ntBASIC3.18□□□□□ -1.9
HOXA11P31270 RBBP4P6-201ENST00000508098 202 ntBASIC3.18□□□□□ -1.9
HOXA11P31270 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.18□□□□□ -1.9
HOXA11P31270 SNORA31.26-201ENST00000517250 137 ntBASIC3.18□□□□□ -1.9
HOXA11P31270 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXA11P31270 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HOXA11P31270 RANP3-201ENST00000530970 276 ntBASIC3.18□□□□□ -1.9
HOXA11P31270 GTF3AP2-201ENST00000557014 266 ntBASIC3.18□□□□□ -1.9
HOXA11P31270 AC093249.1-201ENST00000567049 203 ntBASIC3.18□□□□□ -1.9
HOXA11P31270 AC023043.2-201ENST00000589678 1026 ntBASIC3.18□□□□□ -1.9
HOXA11P31270 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HOXA11P31270 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.18□□□□□ -1.9
HOXA11P31270 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXA11P31270 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
HOXA11P31270 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXA11P31270 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HOXA11P31270 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOXA11P31270 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HOXA11P31270 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOXA11P31270 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOXA11P31270 RNU6-254P-201ENST00000363377 107 ntBASIC3.17□□□□□ -1.9
HOXA11P31270 Y_RNA.162-201ENST00000363683 102 ntBASIC3.17□□□□□ -1.9
HOXA11P31270 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOXA11P31270 Y_RNA.395-201ENST00000383945 109 ntBASIC3.17□□□□□ -1.9
HOXA11P31270 RNU6-76P-201ENST00000384060 104 ntBASIC3.17□□□□□ -1.9
HOXA11P31270 RNU6-43P-201ENST00000384302 107 ntBASIC3.17□□□□□ -1.9
HOXA11P31270 RNU6-817P-201ENST00000391083 104 ntBASIC3.17□□□□□ -1.9
HOXA11P31270 RNA5SP274-201ENST00000410484 108 ntBASIC3.17□□□□□ -1.9
HOXA11P31270 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXA11P31270 AL353729.1-201ENST00000425044 720 ntBASIC3.17□□□□□ -1.9
HOXA11P31270 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXA11P31270 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.17□□□□□ -1.9
HOXA11P31270 Y_RNA.635-201ENST00000459041 101 ntBASIC3.17□□□□□ -1.9
HOXA11P31270 HMGN1P10-201ENST00000474557 553 ntBASIC3.17□□□□□ -1.9
HOXA11P31270 RNU6-189P-201ENST00000516120 101 ntBASIC3.17□□□□□ -1.9
HOXA11P31270 RNU6-1038P-201ENST00000516516 104 ntBASIC3.17□□□□□ -1.9
HOXA11P31270 Y_RNA.718-201ENST00000517110 102 ntBASIC3.17□□□□□ -1.9
HOXA11P31270 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.17□□□□□ -1.9
HOXA11P31270 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXA11P31270 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.17□□□□□ -1.9
HOXA11P31270 MIR3941-201ENST00000582572 103 ntBASIC3.17□□□□□ -1.9
HOXA11P31270 AF038458.1-201ENST00000588406 262 ntBASIC3.17□□□□□ -1.9
HOXA11P31270 AC098657.3-201ENST00000620434 263 ntBASIC3.17□□□□□ -1.9
HOXA11P31270 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
HOXA11P31270 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOXA11P31270 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.16□□□□□ -1.9
HOXA11P31270 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms