Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC136601.2-201ENST00000604356 474 ntBASIC4.9□□□□□ -1.63
VARSP26640 FAM25E-202ENST00000608562 189 ntBASIC4.9□□□□□ -1.63
VARSP26640 AP002826.1-201ENST00000608835 315 ntBASIC4.9□□□□□ -1.63
VARSP26640 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.9□□□□□ -1.63
VARSP26640 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.63
VARSP26640 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
VARSP26640 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VARSP26640 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.63
VARSP26640 SALL4P2-201ENST00000423288 2910 ntBASIC4.9□□□□□ -1.63
VARSP26640 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.89□□□□□ -1.63
VARSP26640 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
VARSP26640 INTS6P1-201ENST00000504674 2530 ntBASIC4.89□□□□□ -1.63
VARSP26640 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.89□□□□□ -1.63
VARSP26640 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VARSP26640 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VARSP26640 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VARSP26640 RNU6-1285P-201ENST00000363480 105 ntBASIC4.89□□□□□ -1.63
VARSP26640 RN7SKP113-201ENST00000363891 295 ntBASIC4.89□□□□□ -1.63
VARSP26640 RNU6-324P-201ENST00000363957 106 ntBASIC4.89□□□□□ -1.63
VARSP26640 RNU6-1144P-201ENST00000384247 104 ntBASIC4.89□□□□□ -1.63
VARSP26640 MIR192-201ENST00000384915 110 ntBASIC4.89□□□□□ -1.63
VARSP26640 MIR518D-201ENST00000385014 87 ntBASIC4.89□□□□□ -1.63
VARSP26640 MIR888-201ENST00000401186 77 ntBASIC4.89□□□□□ -1.63
VARSP26640 MIR1290-201ENST00000408735 78 ntBASIC4.89□□□□□ -1.63
VARSP26640 RN7SKP53-201ENST00000411337 315 ntBASIC4.89□□□□□ -1.63
VARSP26640 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.89□□□□□ -1.63
VARSP26640 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.89□□□□□ -1.63
VARSP26640 AP000705.1-201ENST00000454567 350 ntBASIC4.89□□□□□ -1.63
VARSP26640 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.89□□□□□ -1.63
VARSP26640 RN7SKP179-201ENST00000516126 217 ntBASIC4.89□□□□□ -1.63
VARSP26640 RNU2-56P-201ENST00000516826 190 ntBASIC4.89□□□□□ -1.63
VARSP26640 TRAV28-201ENST00000557548 323 ntBASIC4.89□□□□□ -1.63
VARSP26640 MIR4330-201ENST00000579077 105 ntBASIC4.89□□□□□ -1.63
VARSP26640 LARP7P3-201ENST00000579888 337 ntBASIC4.89□□□□□ -1.63
VARSP26640 AC019159.1-201ENST00000605094 187 ntBASIC4.89□□□□□ -1.63
VARSP26640 LINC00901.1-201ENST00000617252 152 ntBASIC4.89□□□□□ -1.63
VARSP26640 AC099654.7-201ENST00000635788 2127 ntBASIC4.89□□□□□ -1.63
VARSP26640 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VARSP26640 AC004925.1-201ENST00000624256 2706 ntBASIC4.89□□□□□ -1.63
VARSP26640 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.89□□□□□ -1.63
VARSP26640 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VARSP26640 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.89□□□□□ -1.63
VARSP26640 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.89□□□□□ -1.63
VARSP26640 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
VARSP26640 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VARSP26640 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
VARSP26640 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
VARSP26640 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
VARSP26640 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
VARSP26640 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.88□□□□□ -1.63
VARSP26640 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VARSP26640 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VARSP26640 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
VARSP26640 RNU6-801P-201ENST00000364087 105 ntBASIC4.88□□□□□ -1.63
VARSP26640 Y_RNA.293-201ENST00000364908 93 ntBASIC4.88□□□□□ -1.63
VARSP26640 SNORA22-201ENST00000383907 134 ntBASIC4.88□□□□□ -1.63
VARSP26640 SNORA56-201ENST00000383966 129 ntBASIC4.88□□□□□ -1.63
VARSP26640 SNORA8.3-201ENST00000384679 139 ntBASIC4.88□□□□□ -1.63
VARSP26640 MIR626-201ENST00000385032 94 ntBASIC4.88□□□□□ -1.63
VARSP26640 RNA5SP475-201ENST00000410568 110 ntBASIC4.88□□□□□ -1.63
VARSP26640 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.88□□□□□ -1.63
VARSP26640 AC007969.2-201ENST00000441891 191 ntBASIC4.88□□□□□ -1.63
VARSP26640 AC097484.1-201ENST00000471148 389 ntBASIC4.88□□□□□ -1.63
VARSP26640 AC092991.1-201ENST00000477176 376 ntBASIC4.88□□□□□ -1.63
VARSP26640 S100A11P1-201ENST00000477525 312 ntBASIC4.88□□□□□ -1.63
VARSP26640 RN7SL481P-201ENST00000477764 299 ntBASIC4.88□□□□□ -1.63
VARSP26640 BX284632.1-201ENST00000478218 541 ntBASIC4.88□□□□□ -1.63
VARSP26640 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.88□□□□□ -1.63
VARSP26640 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VARSP26640 RNU6-1007P-201ENST00000516586 107 ntBASIC4.88□□□□□ -1.63
VARSP26640 RPL23AP53-201ENST00000521854 457 ntBASIC4.88□□□□□ -1.63
VARSP26640 AC115990.1-201ENST00000526957 301 ntBASIC4.88□□□□□ -1.63
VARSP26640 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.88□□□□□ -1.63
VARSP26640 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.88□□□□□ -1.63
VARSP26640 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.88□□□□□ -1.63
VARSP26640 AC091953.3-201ENST00000623220 236 ntBASIC4.88□□□□□ -1.63
VARSP26640 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
VARSP26640 MIR3674-201ENST00000636576 68 ntBASIC4.88□□□□□ -1.63
VARSP26640 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VARSP26640 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VARSP26640 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.88□□□□□ -1.63
VARSP26640 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.88□□□□□ -1.63
VARSP26640 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VARSP26640 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VARSP26640 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VARSP26640 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VARSP26640 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
VARSP26640 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VARSP26640 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.87□□□□□ -1.63
VARSP26640 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VARSP26640 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
VARSP26640 RNU6-793P-201ENST00000384233 104 ntBASIC4.87□□□□□ -1.63
VARSP26640 Y_RNA.572-201ENST00000384757 98 ntBASIC4.87□□□□□ -1.63
VARSP26640 SNORA77-201ENST00000408716 125 ntBASIC4.87□□□□□ -1.63
VARSP26640 RPS20P14-201ENST00000412545 360 ntBASIC4.87□□□□□ -1.63
VARSP26640 AL590383.1-201ENST00000428602 75 ntBASIC4.87□□□□□ -1.63
VARSP26640 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.87□□□□□ -1.63
VARSP26640 RPL34P20-201ENST00000442771 351 ntBASIC4.87□□□□□ -1.63
VARSP26640 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.87□□□□□ -1.63
VARSP26640 RN7SL441P-201ENST00000492388 296 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms