Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CD40P25942 RBBP8P1-201ENST00000449447 1844 ntBASIC3.5□□□□□ -1.85
CD40P25942 RNU6-874P-201ENST00000362390 105 ntBASIC3.5□□□□□ -1.85
CD40P25942 SNORD32A-201ENST00000364805 84 ntBASIC3.5□□□□□ -1.85
CD40P25942 SNORA69.1-201ENST00000390904 137 ntBASIC3.5□□□□□ -1.85
CD40P25942 SNORA12.2-201ENST00000391040 156 ntBASIC3.5□□□□□ -1.85
CD40P25942 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CD40P25942 HMGB3P2-201ENST00000411913 584 ntBASIC3.5□□□□□ -1.85
CD40P25942 AC245291.1-201ENST00000419501 328 ntBASIC3.5□□□□□ -1.85
CD40P25942 DPH3P2-201ENST00000422618 250 ntBASIC3.5□□□□□ -1.85
CD40P25942 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.5□□□□□ -1.85
CD40P25942 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.5□□□□□ -1.85
CD40P25942 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.5□□□□□ -1.85
CD40P25942 RPS26P28-201ENST00000470806 348 ntBASIC3.5□□□□□ -1.85
CD40P25942 AP001025.1-201ENST00000486139 332 ntBASIC3.5□□□□□ -1.85
CD40P25942 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.5□□□□□ -1.85
CD40P25942 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.5□□□□□ -1.85
CD40P25942 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.5□□□□□ -1.85
CD40P25942 AC120057.2-201ENST00000571520 271 ntBASIC3.5□□□□□ -1.85
CD40P25942 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.5□□□□□ -1.85
CD40P25942 AC124312.5-201ENST00000604451 268 ntBASIC3.5□□□□□ -1.85
CD40P25942 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.5□□□□□ -1.85
CD40P25942 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CD40P25942 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.5□□□□□ -1.85
CD40P25942 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CD40P25942 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CD40P25942 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.5□□□□□ -1.85
CD40P25942 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CD40P25942 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.49□□□□□ -1.85
CD40P25942 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CD40P25942 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CD40P25942 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CD40P25942 SNORD14.1-201ENST00000365609 90 ntBASIC3.49□□□□□ -1.85
CD40P25942 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.49□□□□□ -1.85
CD40P25942 SNORA11-201ENST00000408789 128 ntBASIC3.49□□□□□ -1.85
CD40P25942 EIF1AXP1-201ENST00000419267 435 ntBASIC3.49□□□□□ -1.85
CD40P25942 AL358453.1-201ENST00000422522 250 ntBASIC3.49□□□□□ -1.85
CD40P25942 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CD40P25942 PTGES3P4-201ENST00000426243 356 ntBASIC3.49□□□□□ -1.85
CD40P25942 Z82188.1-201ENST00000436709 154 ntBASIC3.49□□□□□ -1.85
CD40P25942 AL353705.4-201ENST00000449661 238 ntBASIC3.49□□□□□ -1.85
CD40P25942 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.49□□□□□ -1.85
CD40P25942 U8.20-201ENST00000459445 131 ntBASIC3.49□□□□□ -1.85
CD40P25942 RPS26P21-201ENST00000475397 348 ntBASIC3.49□□□□□ -1.85
CD40P25942 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.49□□□□□ -1.85
CD40P25942 RPL22P13-201ENST00000493291 347 ntBASIC3.49□□□□□ -1.85
CD40P25942 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.49□□□□□ -1.85
CD40P25942 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.49□□□□□ -1.85
CD40P25942 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.49□□□□□ -1.85
CD40P25942 SNORA40.14-201ENST00000516543 86 ntBASIC3.49□□□□□ -1.85
CD40P25942 IGLV3-26-201ENST00000520756 302 ntBASIC3.49□□□□□ -1.85
CD40P25942 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.49□□□□□ -1.85
CD40P25942 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.49□□□□□ -1.85
CD40P25942 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.49□□□□□ -1.85
CD40P25942 VN1R91P-201ENST00000594377 169 ntBASIC3.49□□□□□ -1.85
CD40P25942 AC006077.1-201ENST00000604746 343 ntBASIC3.49□□□□□ -1.85
CD40P25942 MIR432-201ENST00000606207 94 ntBASIC3.49□□□□□ -1.85
CD40P25942 U2.1-201ENST00000618978 145 ntBASIC3.49□□□□□ -1.85
CD40P25942 MIR7154-201ENST00000620673 73 ntBASIC3.49□□□□□ -1.85
CD40P25942 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.49□□□□□ -1.85
CD40P25942 AP001148.1-201ENST00000624124 2359 ntBASIC3.49□□□□□ -1.85
CD40P25942 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CD40P25942 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CD40P25942 MTND5P27-201ENST00000428871 1720 ntBASIC3.49□□□□□ -1.85
CD40P25942 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.49□□□□□ -1.85
CD40P25942 AC007496.3-201ENST00000624987 3443 ntBASIC3.49□□□□□ -1.85
CD40P25942 AC010680.1-201ENST00000590024 3590 ntBASIC3.49□□□□□ -1.85
CD40P25942 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CD40P25942 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.49□□□□□ -1.85
CD40P25942 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CD40P25942 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CD40P25942 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.48□□□□□ -1.85
CD40P25942 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CD40P25942 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CD40P25942 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
CD40P25942 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CD40P25942 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.48□□□□□ -1.85
CD40P25942 RHOT1P2-201ENST00000366423 333 ntBASIC3.48□□□□□ -1.85
CD40P25942 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.48□□□□□ -1.85
CD40P25942 RNU6-574P-201ENST00000384265 107 ntBASIC3.48□□□□□ -1.85
CD40P25942 RNU6-196P-201ENST00000384315 107 ntBASIC3.48□□□□□ -1.85
CD40P25942 RNU6-19P-201ENST00000384718 107 ntBASIC3.48□□□□□ -1.85
CD40P25942 MIR628-201ENST00000385229 95 ntBASIC3.48□□□□□ -1.85
CD40P25942 SAR1AP2-201ENST00000392696 594 ntBASIC3.48□□□□□ -1.85
CD40P25942 MTCYBP2-201ENST00000407745 171 ntBASIC3.48□□□□□ -1.85
CD40P25942 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.48□□□□□ -1.85
CD40P25942 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.48□□□□□ -1.85
CD40P25942 RPS29P7-201ENST00000439662 171 ntBASIC3.48□□□□□ -1.85
CD40P25942 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.48□□□□□ -1.85
CD40P25942 AC107626.1-201ENST00000471084 183 ntBASIC3.48□□□□□ -1.85
CD40P25942 RPL30P12-201ENST00000474666 353 ntBASIC3.48□□□□□ -1.85
CD40P25942 RN7SL271P-201ENST00000487601 295 ntBASIC3.48□□□□□ -1.85
CD40P25942 RPL30P1-201ENST00000488676 339 ntBASIC3.48□□□□□ -1.85
CD40P25942 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.48□□□□□ -1.85
CD40P25942 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.48□□□□□ -1.85
CD40P25942 RNU7-175P-201ENST00000515915 61 ntBASIC3.48□□□□□ -1.85
CD40P25942 RN7SKP272-201ENST00000516988 232 ntBASIC3.48□□□□□ -1.85
CD40P25942 SNORA31.21-201ENST00000517180 77 ntBASIC3.48□□□□□ -1.85
CD40P25942 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.48□□□□□ -1.85
CD40P25942 AC022616.4-201ENST00000522985 181 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms