Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC090517.2-201ENST00000614966 680 ntBASIC2.68□□□□□ -1.98
CDH3P22223 MIR6852-201ENST00000621699 66 ntBASIC2.68□□□□□ -1.98
CDH3P22223 AC010297.1-201ENST00000623948 149 ntBASIC2.68□□□□□ -1.98
CDH3P22223 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CDH3P22223 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
CDH3P22223 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDH3P22223 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH3P22223 Z98749.2-208ENST00000381646 500 ntBASIC2.67□□□□□ -1.98
CDH3P22223 DEFA7P-201ENST00000382676 285 ntBASIC2.67□□□□□ -1.98
CDH3P22223 RNU6-658P-201ENST00000384606 106 ntBASIC2.67□□□□□ -1.98
CDH3P22223 SNORA40C-201ENST00000391285 128 ntBASIC2.67□□□□□ -1.98
CDH3P22223 AL138827.1-201ENST00000402666 306 ntBASIC2.67□□□□□ -1.98
CDH3P22223 RNU6-648P-201ENST00000410190 107 ntBASIC2.67□□□□□ -1.98
CDH3P22223 AC023141.4-201ENST00000412031 328 ntBASIC2.67□□□□□ -1.98
CDH3P22223 FCF1P9-201ENST00000412546 282 ntBASIC2.67□□□□□ -1.98
CDH3P22223 NDUFS5P4-201ENST00000412983 318 ntBASIC2.67□□□□□ -1.98
CDH3P22223 BPY2DP-201ENST00000422208 265 ntBASIC2.67□□□□□ -1.98
CDH3P22223 AL669831.1-202ENST00000428504 417 ntBASIC2.67□□□□□ -1.98
CDH3P22223 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.67□□□□□ -1.98
CDH3P22223 GTF2IP13-201ENST00000438487 386 ntBASIC2.67□□□□□ -1.98
CDH3P22223 AL445687.1-201ENST00000439946 251 ntBASIC2.67□□□□□ -1.98
CDH3P22223 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH3P22223 WASF1P1-201ENST00000447560 1131 ntBASIC2.67□□□□□ -1.98
CDH3P22223 AC003071.1-201ENST00000451219 789 ntBASIC2.67□□□□□ -1.98
CDH3P22223 MTATP6P7-201ENST00000453315 681 ntBASIC2.67□□□□□ -1.98
CDH3P22223 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH3P22223 RNU7-180P-201ENST00000459240 63 ntBASIC2.67□□□□□ -1.98
CDH3P22223 AC114786.4-201ENST00000508771 728 ntBASIC2.67□□□□□ -1.98
CDH3P22223 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH3P22223 AC011352.1-201ENST00000512300 793 ntBASIC2.67□□□□□ -1.98
CDH3P22223 RNU6-572P-201ENST00000516724 80 ntBASIC2.67□□□□□ -1.98
CDH3P22223 SNORA31.18-201ENST00000517043 134 ntBASIC2.67□□□□□ -1.98
CDH3P22223 SNORA31.19-201ENST00000517079 126 ntBASIC2.67□□□□□ -1.98
CDH3P22223 SUB1P1-201ENST00000524415 382 ntBASIC2.67□□□□□ -1.98
CDH3P22223 COX6CP5-201ENST00000527162 228 ntBASIC2.67□□□□□ -1.98
CDH3P22223 AL157687.1-201ENST00000554853 619 ntBASIC2.67□□□□□ -1.98
CDH3P22223 AC027807.1-201ENST00000559921 996 ntBASIC2.67□□□□□ -1.98
CDH3P22223 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.67□□□□□ -1.98
CDH3P22223 MIR4319-201ENST00000577285 85 ntBASIC2.67□□□□□ -1.98
CDH3P22223 MIR5583-1-201ENST00000580941 59 ntBASIC2.67□□□□□ -1.98
CDH3P22223 MIR5194-201ENST00000582634 120 ntBASIC2.67□□□□□ -1.98
CDH3P22223 AP003465.2-201ENST00000602571 373 ntBASIC2.67□□□□□ -1.98
CDH3P22223 AL355598.1-201ENST00000604169 202 ntBASIC2.67□□□□□ -1.98
CDH3P22223 AC090115.4-201ENST00000609970 188 ntBASIC2.67□□□□□ -1.98
CDH3P22223 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.67□□□□□ -1.98
CDH3P22223 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CDH3P22223 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CDH3P22223 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDH3P22223 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CDH3P22223 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.67□□□□□ -1.98
CDH3P22223 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.67□□□□□ -1.98
CDH3P22223 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.67□□□□□ -1.98
CDH3P22223 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH3P22223 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH3P22223 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDH3P22223 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.66□□□□□ -1.98
CDH3P22223 RNU6-715P-201ENST00000365204 103 ntBASIC2.66□□□□□ -1.98
CDH3P22223 RNU6-166P-201ENST00000384371 107 ntBASIC2.66□□□□□ -1.98
CDH3P22223 RNU6-908P-201ENST00000410160 94 ntBASIC2.66□□□□□ -1.98
CDH3P22223 RNA5SP184-201ENST00000411071 108 ntBASIC2.66□□□□□ -1.98
CDH3P22223 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH3P22223 UBE2V1P8-201ENST00000437166 265 ntBASIC2.66□□□□□ -1.98
CDH3P22223 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH3P22223 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH3P22223 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH3P22223 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH3P22223 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.66□□□□□ -1.98
CDH3P22223 RNU6-1281P-201ENST00000516223 105 ntBASIC2.66□□□□□ -1.98
CDH3P22223 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.66□□□□□ -1.98
CDH3P22223 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.66□□□□□ -1.98
CDH3P22223 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH3P22223 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH3P22223 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.66□□□□□ -1.98
CDH3P22223 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH3P22223 AC079600.2-201ENST00000550076 130 ntBASIC2.66□□□□□ -1.98
CDH3P22223 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH3P22223 AC136619.2-201ENST00000563361 631 ntBASIC2.66□□□□□ -1.98
CDH3P22223 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.66□□□□□ -1.98
CDH3P22223 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH3P22223 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH3P22223 AC073539.2-201ENST00000597113 165 ntBASIC2.66□□□□□ -1.98
CDH3P22223 MIR1321-201ENST00000637766 79 ntBASIC2.66□□□□□ -1.98
CDH3P22223 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.66□□□□□ -1.98
CDH3P22223 AC093536.2-201ENST00000565257 1406 ntBASIC2.66□□□□□ -1.98
CDH3P22223 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.66□□□□□ -1.98
CDH3P22223 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
CDH3P22223 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.98
CDH3P22223 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.65□□□□□ -1.98
CDH3P22223 ZNF271P-202ENST00000465539 1970 ntBASIC2.65□□□□□ -1.98
CDH3P22223 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CDH3P22223 AC110491.1-201ENST00000562191 2010 ntBASIC2.65□□□□□ -1.99
CDH3P22223 MIR26A1-201ENST00000362205 77 ntBASIC2.65□□□□□ -1.99
CDH3P22223 Y_RNA.9-201ENST00000362354 101 ntBASIC2.65□□□□□ -1.99
CDH3P22223 RNU4-12P-201ENST00000365233 139 ntBASIC2.65□□□□□ -1.99
CDH3P22223 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH3P22223 Y_RNA.450-201ENST00000384198 113 ntBASIC2.65□□□□□ -1.99
CDH3P22223 RNU6-1127P-201ENST00000384580 107 ntBASIC2.65□□□□□ -1.99
CDH3P22223 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.65□□□□□ -1.99
CDH3P22223 CIR1P3-201ENST00000405137 479 ntBASIC2.65□□□□□ -1.99
CDH3P22223 RPL21P90-201ENST00000415692 466 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms