Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 MIR6766-201ENST00000622641 72 ntBASIC2.33□□□□□ -2.04
HLA-DPA1P20036 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.33□□□□□ -2.04
HLA-DPA1P20036 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DPA1P20036 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DPA1P20036 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
HLA-DPA1P20036 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HLA-DPA1P20036 OR4G2P-201ENST00000328113 903 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HLA-DPA1P20036 RNA5SP289-201ENST00000362332 137 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 U8.3-201ENST00000363321 132 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 RNY4P34-201ENST00000364779 95 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 RNU6-384P-201ENST00000364900 104 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 RNU6-169P-201ENST00000365336 107 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 SNORA25B-201ENST00000365507 128 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 RPS3AP3-201ENST00000411933 242 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 RPL21P90-201ENST00000415692 466 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 MORF4L1P6-201ENST00000418771 268 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DPA1P20036 TOMM20P4-201ENST00000427861 435 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.32□□□□□ -2.04
HLA-DPA1P20036 AL365400.1-201ENST00000431854 640 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.32□□□□□ -2.04
HLA-DPA1P20036 MTATP6P16-201ENST00000434543 526 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 RPS15AP28-201ENST00000435088 386 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 AL360271.2-201ENST00000447710 161 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 AC006026.2-201ENST00000457376 180 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 AC107032.1-201ENST00000485945 480 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.32□□□□□ -2.04
HLA-DPA1P20036 AC116562.3-201ENST00000506136 177 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.32□□□□□ -2.04
HLA-DPA1P20036 AC091965.2-201ENST00000512324 613 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 RNU6-586P-201ENST00000517265 104 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DPA1P20036 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.32□□□□□ -2.04
HLA-DPA1P20036 AC068587.5-201ENST00000528506 175 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DPA1P20036 MIR5692A1-201ENST00000580523 69 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 MIR3682-201ENST00000581338 84 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 AC007229.1-201ENST00000590455 412 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 AC098614.4-201ENST00000607601 462 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 AL360219.1-201ENST00000610230 366 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 AC008250.2-201ENST00000615261 205 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 AC009090.3-201ENST00000616553 565 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 AC009159.2-201ENST00000617603 606 ntBASIC2.32□□□□□ -2.04
HLA-DPA1P20036 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DPA1P20036 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DPA1P20036 RNU1-23P-201ENST00000363361 144 ntBASIC2.31□□□□□ -2.04
HLA-DPA1P20036 RNU6-371P-201ENST00000364283 108 ntBASIC2.31□□□□□ -2.04
HLA-DPA1P20036 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DPA1P20036 RNU6-387P-201ENST00000411331 105 ntBASIC2.31□□□□□ -2.04
HLA-DPA1P20036 AC107081.1-201ENST00000414975 361 ntBASIC2.31□□□□□ -2.04
HLA-DPA1P20036 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DPA1P20036 AC073614.1-201ENST00000438690 650 ntBASIC2.31□□□□□ -2.04
HLA-DPA1P20036 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DPA1P20036 IPO7P1-201ENST00000442031 636 ntBASIC2.31□□□□□ -2.04
HLA-DPA1P20036 AL136380.1-201ENST00000447970 162 ntBASIC2.31□□□□□ -2.04
HLA-DPA1P20036 PSPHP1-201ENST00000450062 261 ntBASIC2.31□□□□□ -2.04
HLA-DPA1P20036 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DPA1P20036 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DPA1P20036 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DPA1P20036 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DPA1P20036 RNU2-19P-201ENST00000517288 84 ntBASIC2.31□□□□□ -2.04
HLA-DPA1P20036 IGLV3-17-201ENST00000519099 244 ntBASIC2.31□□□□□ -2.04
HLA-DPA1P20036 AC107953.1-201ENST00000522216 297 ntBASIC2.31□□□□□ -2.04
HLA-DPA1P20036 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.31□□□□□ -2.04
HLA-DPA1P20036 AL512310.1-201ENST00000548639 172 ntBASIC2.31□□□□□ -2.04
HLA-DPA1P20036 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DPA1P20036 AC093249.1-201ENST00000567049 203 ntBASIC2.31□□□□□ -2.04
HLA-DPA1P20036 MIR4529-201ENST00000578110 78 ntBASIC2.31□□□□□ -2.04
HLA-DPA1P20036 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DPA1P20036 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DPA1P20036 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.31□□□□□ -2.04
HLA-DPA1P20036 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
HLA-DPA1P20036 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DPA1P20036 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DPA1P20036 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HLA-DPA1P20036 RNA5SP126-201ENST00000365092 109 ntBASIC2.3□□□□□ -2.04
HLA-DPA1P20036 RNU6-622P-201ENST00000384272 103 ntBASIC2.3□□□□□ -2.04
HLA-DPA1P20036 AL591416.1-201ENST00000404015 867 ntBASIC2.3□□□□□ -2.04
HLA-DPA1P20036 RNU4-53P-201ENST00000410828 140 ntBASIC2.3□□□□□ -2.04
HLA-DPA1P20036 EEF1A1P40-201ENST00000412883 573 ntBASIC2.3□□□□□ -2.04
HLA-DPA1P20036 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DPA1P20036 C1DP2-201ENST00000418167 426 ntBASIC2.3□□□□□ -2.04
HLA-DPA1P20036 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.3□□□□□ -2.04
HLA-DPA1P20036 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DPA1P20036 AP001025.1-201ENST00000486139 332 ntBASIC2.3□□□□□ -2.04
HLA-DPA1P20036 AC018868.1-201ENST00000491307 315 ntBASIC2.3□□□□□ -2.04
HLA-DPA1P20036 RNA5SP137-201ENST00000516833 135 ntBASIC2.3□□□□□ -2.04
HLA-DPA1P20036 RNA5SP402-201ENST00000517148 110 ntBASIC2.3□□□□□ -2.04
HLA-DPA1P20036 SNORA31.23-201ENST00000517219 133 ntBASIC2.3□□□□□ -2.04
HLA-DPA1P20036 AC087883.1-201ENST00000551882 391 ntBASIC2.3□□□□□ -2.04
HLA-DPA1P20036 AC121758.2-201ENST00000553271 193 ntBASIC2.3□□□□□ -2.04
HLA-DPA1P20036 MTATP6P24-201ENST00000576835 677 ntBASIC2.3□□□□□ -2.04
HLA-DPA1P20036 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DPA1P20036 AL031274.2-201ENST00000599419 203 ntBASIC2.3□□□□□ -2.04
HLA-DPA1P20036 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.3□□□□□ -2.04
HLA-DPA1P20036 AL137847.3-201ENST00000611521 109 ntBASIC2.3□□□□□ -2.04
HLA-DPA1P20036 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.3□□□□□ -2.04
HLA-DPA1P20036 AL359740.1-201ENST00000624340 592 ntBASIC2.3□□□□□ -2.04
HLA-DPA1P20036 AC007494.3-201ENST00000624660 743 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms