Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.57□□□□□ -1.68
ERCC3P19447 AC011816.1-201ENST00000441346 546 ntBASIC4.57□□□□□ -1.68
ERCC3P19447 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.57□□□□□ -1.68
ERCC3P19447 AP002884.2-201ENST00000471647 395 ntBASIC4.57□□□□□ -1.68
ERCC3P19447 RPL17P19-201ENST00000489069 552 ntBASIC4.57□□□□□ -1.68
ERCC3P19447 AC022447.4-201ENST00000504053 364 ntBASIC4.57□□□□□ -1.68
ERCC3P19447 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.57□□□□□ -1.68
ERCC3P19447 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.57□□□□□ -1.68
ERCC3P19447 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.57□□□□□ -1.68
ERCC3P19447 YPEL5P3-201ENST00000547227 352 ntBASIC4.57□□□□□ -1.68
ERCC3P19447 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.57□□□□□ -1.68
ERCC3P19447 AC012603.1-201ENST00000606424 528 ntBASIC4.57□□□□□ -1.68
ERCC3P19447 AC024581.2-201ENST00000619986 252 ntBASIC4.57□□□□□ -1.68
ERCC3P19447 AC241585.2-209ENST00000638217 143 ntBASIC4.57□□□□□ -1.68
ERCC3P19447 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ERCC3P19447 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ERCC3P19447 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
ERCC3P19447 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ERCC3P19447 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ERCC3P19447 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ERCC3P19447 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
ERCC3P19447 AC009541.1-201ENST00000438279 2662 ntBASIC4.57□□□□□ -1.68
ERCC3P19447 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ERCC3P19447 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ERCC3P19447 CDC27P3-201ENST00000635418 1910 ntBASIC4.56□□□□□ -1.68
ERCC3P19447 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
ERCC3P19447 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ERCC3P19447 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ERCC3P19447 RNA5SP119-201ENST00000362715 117 ntBASIC4.56□□□□□ -1.68
ERCC3P19447 RNA5SP399-201ENST00000364003 117 ntBASIC4.56□□□□□ -1.68
ERCC3P19447 RNU6-99P-201ENST00000364721 107 ntBASIC4.56□□□□□ -1.68
ERCC3P19447 Y_RNA.333-201ENST00000365274 102 ntBASIC4.56□□□□□ -1.68
ERCC3P19447 AL161651.1-201ENST00000440882 223 ntBASIC4.56□□□□□ -1.68
ERCC3P19447 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.56□□□□□ -1.68
ERCC3P19447 RPS3AP46-201ENST00000448352 682 ntBASIC4.56□□□□□ -1.68
ERCC3P19447 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.56□□□□□ -1.68
ERCC3P19447 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.56□□□□□ -1.68
ERCC3P19447 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.56□□□□□ -1.68
ERCC3P19447 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.56□□□□□ -1.68
ERCC3P19447 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.56□□□□□ -1.68
ERCC3P19447 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.56□□□□□ -1.68
ERCC3P19447 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ERCC3P19447 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ERCC3P19447 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ERCC3P19447 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ERCC3P19447 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ERCC3P19447 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
ERCC3P19447 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ERCC3P19447 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
ERCC3P19447 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ERCC3P19447 Y_RNA.364-201ENST00000365532 101 ntBASIC4.55□□□□□ -1.68
ERCC3P19447 RNU1-89P-201ENST00000384592 164 ntBASIC4.55□□□□□ -1.68
ERCC3P19447 RPS29P13-201ENST00000402041 169 ntBASIC4.55□□□□□ -1.68
ERCC3P19447 ARF4P2-201ENST00000430209 526 ntBASIC4.55□□□□□ -1.68
ERCC3P19447 AC091286.1-201ENST00000431233 461 ntBASIC4.55□□□□□ -1.68
ERCC3P19447 HMGN2P20-201ENST00000437531 273 ntBASIC4.55□□□□□ -1.68
ERCC3P19447 MED28P2-201ENST00000475771 317 ntBASIC4.55□□□□□ -1.68
ERCC3P19447 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.55□□□□□ -1.68
ERCC3P19447 AC105758.1-201ENST00000506038 399 ntBASIC4.55□□□□□ -1.68
ERCC3P19447 RNU5F-8P-201ENST00000515941 111 ntBASIC4.55□□□□□ -1.68
ERCC3P19447 SNORA31.1-201ENST00000515993 133 ntBASIC4.55□□□□□ -1.68
ERCC3P19447 SNORA31.5-201ENST00000516190 133 ntBASIC4.55□□□□□ -1.68
ERCC3P19447 RNU6-1045P-201ENST00000516321 107 ntBASIC4.55□□□□□ -1.68
ERCC3P19447 RNU1-95P-201ENST00000516357 160 ntBASIC4.55□□□□□ -1.68
ERCC3P19447 RNU1-128P-201ENST00000516704 160 ntBASIC4.55□□□□□ -1.68
ERCC3P19447 RNU6-711P-201ENST00000517255 106 ntBASIC4.55□□□□□ -1.68
ERCC3P19447 AC087499.8-201ENST00000578406 226 ntBASIC4.55□□□□□ -1.68
ERCC3P19447 AC019159.1-201ENST00000605094 187 ntBASIC4.55□□□□□ -1.68
ERCC3P19447 MIR7702-201ENST00000621931 59 ntBASIC4.55□□□□□ -1.68
ERCC3P19447 AL136164.4-201ENST00000625013 2135 ntBASIC4.55□□□□□ -1.68
ERCC3P19447 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ERCC3P19447 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.54□□□□□ -1.68
ERCC3P19447 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ERCC3P19447 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
ERCC3P19447 MIR7-3-201ENST00000384898 110 ntBASIC4.54□□□□□ -1.68
ERCC3P19447 SNORA3.3-201ENST00000408712 125 ntBASIC4.54□□□□□ -1.68
ERCC3P19447 RNU6-1077P-201ENST00000410506 102 ntBASIC4.54□□□□□ -1.68
ERCC3P19447 RHEBP3-201ENST00000411920 351 ntBASIC4.54□□□□□ -1.68
ERCC3P19447 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.54□□□□□ -1.68
ERCC3P19447 MCFD2P1-201ENST00000417812 300 ntBASIC4.54□□□□□ -1.68
ERCC3P19447 AC008267.5-201ENST00000424928 265 ntBASIC4.54□□□□□ -1.68
ERCC3P19447 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.54□□□□□ -1.68
ERCC3P19447 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.54□□□□□ -1.68
ERCC3P19447 AL714022.1-201ENST00000439897 151 ntBASIC4.54□□□□□ -1.68
ERCC3P19447 AL136097.1-201ENST00000456945 913 ntBASIC4.54□□□□□ -1.68
ERCC3P19447 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.54□□□□□ -1.68
ERCC3P19447 AC010265.1-201ENST00000513509 211 ntBASIC4.54□□□□□ -1.68
ERCC3P19447 ACA59.2-201ENST00000517061 156 ntBASIC4.54□□□□□ -1.68
ERCC3P19447 AC026403.1-201ENST00000518938 295 ntBASIC4.54□□□□□ -1.68
ERCC3P19447 AC009163.5-201ENST00000575421 637 ntBASIC4.54□□□□□ -1.68
ERCC3P19447 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.54□□□□□ -1.68
ERCC3P19447 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.54□□□□□ -1.68
ERCC3P19447 AL158827.2-201ENST00000602494 330 ntBASIC4.54□□□□□ -1.68
ERCC3P19447 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.54□□□□□ -1.68
ERCC3P19447 AL691447.3-201ENST00000635020 330 ntBASIC4.54□□□□□ -1.68
ERCC3P19447 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
ERCC3P19447 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.54□□□□□ -1.68
ERCC3P19447 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
ERCC3P19447 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.53□□□□□ -1.68
ERCC3P19447 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms