Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 RNU6-1178P-201ENST00000516674 107 ntBASIC2.51□□□□□ -2.01
KRT3P12035 AC109329.2-201ENST00000519658 482 ntBASIC2.51□□□□□ -2.01
KRT3P12035 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.51□□□□□ -2.01
KRT3P12035 FAM92A1P1-201ENST00000528023 890 ntBASIC2.51□□□□□ -2.01
KRT3P12035 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.51□□□□□ -2.01
KRT3P12035 AC092325.1-201ENST00000566449 554 ntBASIC2.51□□□□□ -2.01
KRT3P12035 MIR5692A1-201ENST00000580523 69 ntBASIC2.51□□□□□ -2.01
KRT3P12035 MIR3162-201ENST00000581818 82 ntBASIC2.51□□□□□ -2.01
KRT3P12035 Z99129.1-201ENST00000612510 255 ntBASIC2.51□□□□□ -2.01
KRT3P12035 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.51□□□□□ -2.01
KRT3P12035 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.51□□□□□ -2.01
KRT3P12035 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
KRT3P12035 AC016717.2-201ENST00000609089 5141 ntBASIC2.51□□□□□ -2.01
KRT3P12035 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
KRT3P12035 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.5□□□□□ -2.01
KRT3P12035 SNORD114-30-201ENST00000364448 72 ntBASIC2.5□□□□□ -2.01
KRT3P12035 RN7SKP226-201ENST00000364912 300 ntBASIC2.5□□□□□ -2.01
KRT3P12035 RNU6-166P-201ENST00000384371 107 ntBASIC2.5□□□□□ -2.01
KRT3P12035 RNU6-550P-201ENST00000391057 101 ntBASIC2.5□□□□□ -2.01
KRT3P12035 AC068050.1-201ENST00000394891 380 ntBASIC2.5□□□□□ -2.01
KRT3P12035 AL133475.1-201ENST00000404414 305 ntBASIC2.5□□□□□ -2.01
KRT3P12035 Y_RNA.623-201ENST00000411128 95 ntBASIC2.5□□□□□ -2.01
KRT3P12035 AC096649.2-201ENST00000416186 393 ntBASIC2.5□□□□□ -2.01
KRT3P12035 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.5□□□□□ -2.01
KRT3P12035 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.5□□□□□ -2.01
KRT3P12035 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
KRT3P12035 MTCO3P5-201ENST00000433620 714 ntBASIC2.5□□□□□ -2.01
KRT3P12035 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.5□□□□□ -2.01
KRT3P12035 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.5□□□□□ -2.01
KRT3P12035 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.5□□□□□ -2.01
KRT3P12035 OSTCP8-201ENST00000445117 448 ntBASIC2.5□□□□□ -2.01
KRT3P12035 AL441985.1-201ENST00000457727 251 ntBASIC2.5□□□□□ -2.01
KRT3P12035 AC107626.1-201ENST00000471084 183 ntBASIC2.5□□□□□ -2.01
KRT3P12035 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.5□□□□□ -2.01
KRT3P12035 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.5□□□□□ -2.01
KRT3P12035 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.5□□□□□ -2.01
KRT3P12035 AC114781.4-201ENST00000513707 639 ntBASIC2.5□□□□□ -2.01
KRT3P12035 SNORA25.11-201ENST00000515935 105 ntBASIC2.5□□□□□ -2.01
KRT3P12035 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.5□□□□□ -2.01
KRT3P12035 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.5□□□□□ -2.01
KRT3P12035 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.5□□□□□ -2.01
KRT3P12035 AC024909.2-201ENST00000553035 286 ntBASIC2.5□□□□□ -2.01
KRT3P12035 AC027176.1-201ENST00000560204 514 ntBASIC2.5□□□□□ -2.01
KRT3P12035 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.5□□□□□ -2.01
KRT3P12035 MIR4775-201ENST00000581168 75 ntBASIC2.5□□□□□ -2.01
KRT3P12035 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.5□□□□□ -2.01
KRT3P12035 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
KRT3P12035 HSPA8P4-201ENST00000511877 1920 ntBASIC2.5□□□□□ -2.01
KRT3P12035 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
KRT3P12035 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
KRT3P12035 AL136360.1-201ENST00000503377 1900 ntBASIC2.49□□□□□ -2.01
KRT3P12035 Z98749.2-208ENST00000381646 500 ntBASIC2.49□□□□□ -2.01
KRT3P12035 MIR218-1-201ENST00000384999 110 ntBASIC2.49□□□□□ -2.01
KRT3P12035 Y_RNA.582-201ENST00000391023 95 ntBASIC2.49□□□□□ -2.01
KRT3P12035 RNU4-55P-201ENST00000410731 137 ntBASIC2.49□□□□□ -2.01
KRT3P12035 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.49□□□□□ -2.01
KRT3P12035 AC016831.2-201ENST00000417179 352 ntBASIC2.49□□□□□ -2.01
KRT3P12035 Z98742.2-201ENST00000431564 187 ntBASIC2.49□□□□□ -2.01
KRT3P12035 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.49□□□□□ -2.01
KRT3P12035 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.49□□□□□ -2.01
KRT3P12035 MTCO3P7-201ENST00000510008 774 ntBASIC2.49□□□□□ -2.01
KRT3P12035 BTF3P12-201ENST00000519620 469 ntBASIC2.49□□□□□ -2.01
KRT3P12035 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.49□□□□□ -2.01
KRT3P12035 AC021269.2-201ENST00000532318 330 ntBASIC2.49□□□□□ -2.01
KRT3P12035 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.49□□□□□ -2.01
KRT3P12035 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.49□□□□□ -2.01
KRT3P12035 AC009063.1-201ENST00000563342 702 ntBASIC2.49□□□□□ -2.01
KRT3P12035 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.49□□□□□ -2.01
KRT3P12035 AC023824.2-201ENST00000566185 400 ntBASIC2.49□□□□□ -2.01
KRT3P12035 MYL12BP1-201ENST00000569826 507 ntBASIC2.49□□□□□ -2.01
KRT3P12035 MIR3616-201ENST00000584070 92 ntBASIC2.49□□□□□ -2.01
KRT3P12035 AL136363.2-201ENST00000604173 851 ntBASIC2.49□□□□□ -2.01
KRT3P12035 AC008945.2-201ENST00000606056 604 ntBASIC2.49□□□□□ -2.01
KRT3P12035 AC104073.3-201ENST00000610942 955 ntBASIC2.49□□□□□ -2.01
KRT3P12035 AL158209.2-201ENST00000619266 216 ntBASIC2.49□□□□□ -2.01
KRT3P12035 ZNF680P1-201ENST00000436625 1469 ntBASIC2.49□□□□□ -2.01
KRT3P12035 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.48□□□□□ -2.01
KRT3P12035 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.48□□□□□ -2.01
KRT3P12035 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.48□□□□□ -2.01
KRT3P12035 OR4G2P-201ENST00000328113 903 ntBASIC2.48□□□□□ -2.01
KRT3P12035 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.48□□□□□ -2.01
KRT3P12035 Y_RNA.1-201ENST00000352915 104 ntBASIC2.48□□□□□ -2.01
KRT3P12035 MIR412-201ENST00000362142 91 ntBASIC2.48□□□□□ -2.01
KRT3P12035 RNU6-1120P-201ENST00000362988 108 ntBASIC2.48□□□□□ -2.01
KRT3P12035 SNORA38-201ENST00000363946 132 ntBASIC2.48□□□□□ -2.01
KRT3P12035 Y_RNA.194-201ENST00000363985 102 ntBASIC2.48□□□□□ -2.01
KRT3P12035 RNU4-75P-201ENST00000364621 146 ntBASIC2.48□□□□□ -2.01
KRT3P12035 RNU1-51P-201ENST00000365345 176 ntBASIC2.48□□□□□ -2.01
KRT3P12035 Y_RNA.409-201ENST00000383990 98 ntBASIC2.48□□□□□ -2.01
KRT3P12035 SNORA75B-201ENST00000384053 137 ntBASIC2.48□□□□□ -2.01
KRT3P12035 MIR144-201ENST00000384886 86 ntBASIC2.48□□□□□ -2.01
KRT3P12035 AC009963.1-201ENST00000417265 157 ntBASIC2.48□□□□□ -2.01
KRT3P12035 PTGES3P4-201ENST00000426243 356 ntBASIC2.48□□□□□ -2.01
KRT3P12035 AL513328.1-201ENST00000446460 224 ntBASIC2.48□□□□□ -2.01
KRT3P12035 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.48□□□□□ -2.01
KRT3P12035 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
KRT3P12035 AC234781.5-201ENST00000508429 271 ntBASIC2.48□□□□□ -2.01
KRT3P12035 RNA5SP82-201ENST00000516707 92 ntBASIC2.48□□□□□ -2.01
KRT3P12035 RNU6-685P-201ENST00000517088 95 ntBASIC2.48□□□□□ -2.01
KRT3P12035 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms