Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.56□□□□□ -2.16
CD28P10747 RPL36AP48-201ENST00000485521 314 ntBASIC1.56□□□□□ -2.16
CD28P10747 RPS27P21-201ENST00000486977 252 ntBASIC1.56□□□□□ -2.16
CD28P10747 AC011005.2-201ENST00000487324 359 ntBASIC1.56□□□□□ -2.16
CD28P10747 AC022493.1-201ENST00000492984 337 ntBASIC1.56□□□□□ -2.16
CD28P10747 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.56□□□□□ -2.16
CD28P10747 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.56□□□□□ -2.16
CD28P10747 AC117522.2-201ENST00000510049 657 ntBASIC1.56□□□□□ -2.16
CD28P10747 SMURF2P1-201ENST00000514992 481 ntBASIC1.56□□□□□ -2.16
CD28P10747 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.56□□□□□ -2.16
CD28P10747 FAM92A1P1-201ENST00000528023 890 ntBASIC1.56□□□□□ -2.16
CD28P10747 AP003181.2-201ENST00000528941 181 ntBASIC1.56□□□□□ -2.16
CD28P10747 CBX3P7-201ENST00000532876 502 ntBASIC1.56□□□□□ -2.16
CD28P10747 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.56□□□□□ -2.16
CD28P10747 AC136619.2-201ENST00000563361 631 ntBASIC1.56□□□□□ -2.16
CD28P10747 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.56□□□□□ -2.16
CD28P10747 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.56□□□□□ -2.16
CD28P10747 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.56□□□□□ -2.16
CD28P10747 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.56□□□□□ -2.16
CD28P10747 SNRPGP19-201ENST00000603826 189 ntBASIC1.56□□□□□ -2.16
CD28P10747 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
CD28P10747 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.56□□□□□ -2.16
CD28P10747 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CD28P10747 HAUS6P2-201ENST00000433254 2404 ntBASIC1.55□□□□□ -2.16
CD28P10747 SNORA26.9-201ENST00000391322 122 ntBASIC1.55□□□□□ -2.16
CD28P10747 FTH1P15-201ENST00000406984 280 ntBASIC1.55□□□□□ -2.16
CD28P10747 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.55□□□□□ -2.16
CD28P10747 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.55□□□□□ -2.16
CD28P10747 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.55□□□□□ -2.16
CD28P10747 CYCSP49-201ENST00000420810 319 ntBASIC1.55□□□□□ -2.16
CD28P10747 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.55□□□□□ -2.16
CD28P10747 AL353706.1-201ENST00000436728 494 ntBASIC1.55□□□□□ -2.16
CD28P10747 EPS15P1-201ENST00000448836 336 ntBASIC1.55□□□□□ -2.16
CD28P10747 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CD28P10747 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.55□□□□□ -2.16
CD28P10747 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.55□□□□□ -2.16
CD28P10747 RPL30P6-201ENST00000475925 342 ntBASIC1.55□□□□□ -2.16
CD28P10747 AP000797.1-201ENST00000478870 387 ntBASIC1.55□□□□□ -2.16
CD28P10747 AC010587.1-201ENST00000505809 469 ntBASIC1.55□□□□□ -2.16
CD28P10747 MTND1P22-201ENST00000510572 951 ntBASIC1.55□□□□□ -2.16
CD28P10747 SNORA3.4-201ENST00000515969 96 ntBASIC1.55□□□□□ -2.16
CD28P10747 Y_RNA.689-201ENST00000516589 107 ntBASIC1.55□□□□□ -2.16
CD28P10747 RN7SKP219-201ENST00000516825 296 ntBASIC1.55□□□□□ -2.16
CD28P10747 RNA5SP364-201ENST00000516938 78 ntBASIC1.55□□□□□ -2.16
CD28P10747 AC022878.1-201ENST00000530684 149 ntBASIC1.55□□□□□ -2.16
CD28P10747 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CD28P10747 AC110588.1-201ENST00000559699 137 ntBASIC1.55□□□□□ -2.16
CD28P10747 AL138976.2-201ENST00000563989 694 ntBASIC1.55□□□□□ -2.16
CD28P10747 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
CD28P10747 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CD28P10747 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CD28P10747 AC002984.1-201ENST00000591692 448 ntBASIC1.55□□□□□ -2.16
CD28P10747 AL138889.2-201ENST00000603883 242 ntBASIC1.55□□□□□ -2.16
CD28P10747 AL359547.2-201ENST00000615810 418 ntBASIC1.55□□□□□ -2.16
CD28P10747 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.55□□□□□ -2.16
CD28P10747 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.55□□□□□ -2.16
CD28P10747 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
CD28P10747 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CD28P10747 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.54□□□□□ -2.16
CD28P10747 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.54□□□□□ -2.16
CD28P10747 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
CD28P10747 MIR412-201ENST00000362142 91 ntBASIC1.54□□□□□ -2.16
CD28P10747 RNU5E-1-201ENST00000362477 120 ntBASIC1.54□□□□□ -2.16
CD28P10747 RNU6-942P-201ENST00000363002 107 ntBASIC1.54□□□□□ -2.16
CD28P10747 SNORA16B-201ENST00000364674 135 ntBASIC1.54□□□□□ -2.16
CD28P10747 RNU6-487P-201ENST00000365430 104 ntBASIC1.54□□□□□ -2.16
CD28P10747 SNORA51.11-201ENST00000384442 131 ntBASIC1.54□□□□□ -2.16
CD28P10747 MIR558-201ENST00000384920 94 ntBASIC1.54□□□□□ -2.16
CD28P10747 RNU2-40P-201ENST00000410833 196 ntBASIC1.54□□□□□ -2.16
CD28P10747 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.54□□□□□ -2.16
CD28P10747 AL356379.1-201ENST00000414105 126 ntBASIC1.54□□□□□ -2.16
CD28P10747 EIF4EP4-201ENST00000424916 578 ntBASIC1.54□□□□□ -2.16
CD28P10747 MED13P1-201ENST00000428342 171 ntBASIC1.54□□□□□ -2.16
CD28P10747 SRIP2-201ENST00000428470 166 ntBASIC1.54□□□□□ -2.16
CD28P10747 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.54□□□□□ -2.16
CD28P10747 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.54□□□□□ -2.16
CD28P10747 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.54□□□□□ -2.16
CD28P10747 USP9YP8-201ENST00000441913 500 ntBASIC1.54□□□□□ -2.16
CD28P10747 AC007677.1-201ENST00000445757 515 ntBASIC1.54□□□□□ -2.16
CD28P10747 AL021397.1-201ENST00000451806 248 ntBASIC1.54□□□□□ -2.16
CD28P10747 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.54□□□□□ -2.16
CD28P10747 AC025033.1-201ENST00000463883 194 ntBASIC1.54□□□□□ -2.16
CD28P10747 AC079804.2-201ENST00000490376 200 ntBASIC1.54□□□□□ -2.16
CD28P10747 RPL23AP63-201ENST00000498752 471 ntBASIC1.54□□□□□ -2.16
CD28P10747 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.54□□□□□ -2.16
CD28P10747 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.54□□□□□ -2.16
CD28P10747 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.54□□□□□ -2.16
CD28P10747 RNU6-991P-201ENST00000516168 107 ntBASIC1.54□□□□□ -2.16
CD28P10747 SNORA48.11-201ENST00000517015 89 ntBASIC1.54□□□□□ -2.16
CD28P10747 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.54□□□□□ -2.16
CD28P10747 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.54□□□□□ -2.16
CD28P10747 AK6P1-201ENST00000540219 478 ntBASIC1.54□□□□□ -2.16
CD28P10747 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.54□□□□□ -2.16
CD28P10747 MTND1P24-201ENST00000552175 861 ntBASIC1.54□□□□□ -2.16
CD28P10747 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.54□□□□□ -2.16
CD28P10747 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.54□□□□□ -2.16
CD28P10747 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.54□□□□□ -2.16
CD28P10747 AL713866.2-201ENST00000603579 219 ntBASIC1.54□□□□□ -2.16
CD28P10747 AC112191.3-201ENST00000604371 277 ntBASIC1.54□□□□□ -2.16
CD28P10747 AL022161.1-201ENST00000604390 213 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms