Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 NUP35P1-201ENST00000422734 947 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.3□□□□□ -1.88
PF4V1P10720 AC236972.1-201ENST00000433225 199 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.3□□□□□ -1.88
PF4V1P10720 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.3□□□□□ -1.88
PF4V1P10720 snoU13.14-201ENST00000459372 104 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.3□□□□□ -1.88
PF4V1P10720 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 RNU6-307P-201ENST00000516743 106 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 Y_RNA.718-201ENST00000517110 102 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.3□□□□□ -1.88
PF4V1P10720 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.3□□□□□ -1.88
PF4V1P10720 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.3□□□□□ -1.88
PF4V1P10720 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.3□□□□□ -1.88
PF4V1P10720 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.3□□□□□ -1.88
PF4V1P10720 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.3□□□□□ -1.88
PF4V1P10720 AC020914.4-201ENST00000597690 277 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 AC073410.2-201ENST00000603240 332 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 AL159153.1-201ENST00000619688 317 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 MIR7157-201ENST00000635801 60 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 AL669831.3-213ENST00000636676 183 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 Z75746.1-201ENST00000440243 2080 ntBASIC3.3□□□□□ -1.88
PF4V1P10720 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.3□□□□□ -1.88
PF4V1P10720 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PF4V1P10720 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.29□□□□□ -1.88
PF4V1P10720 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PF4V1P10720 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PF4V1P10720 RNU6-1059P-201ENST00000363752 98 ntBASIC3.29□□□□□ -1.88
PF4V1P10720 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
PF4V1P10720 RNU6-842P-201ENST00000384269 107 ntBASIC3.29□□□□□ -1.88
PF4V1P10720 Y_RNA.535-201ENST00000384612 99 ntBASIC3.29□□□□□ -1.88
PF4V1P10720 RN7SKP202-201ENST00000410439 330 ntBASIC3.29□□□□□ -1.88
PF4V1P10720 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.29□□□□□ -1.88
PF4V1P10720 AC078809.1-201ENST00000427601 140 ntBASIC3.29□□□□□ -1.88
PF4V1P10720 AL117339.2-201ENST00000430475 180 ntBASIC3.29□□□□□ -1.88
PF4V1P10720 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.29□□□□□ -1.88
PF4V1P10720 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.29□□□□□ -1.88
PF4V1P10720 Y_RNA.653-201ENST00000459091 95 ntBASIC3.29□□□□□ -1.88
PF4V1P10720 RPL21P129-201ENST00000491732 478 ntBASIC3.29□□□□□ -1.88
PF4V1P10720 RN7SL691P-201ENST00000494487 301 ntBASIC3.29□□□□□ -1.88
PF4V1P10720 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.29□□□□□ -1.88
PF4V1P10720 AC016632.1-201ENST00000503994 196 ntBASIC3.29□□□□□ -1.88
PF4V1P10720 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.29□□□□□ -1.88
PF4V1P10720 AC016256.1-201ENST00000547971 354 ntBASIC3.29□□□□□ -1.88
PF4V1P10720 MTCO3P13-201ENST00000577757 781 ntBASIC3.29□□□□□ -1.88
PF4V1P10720 MIR4273-201ENST00000582824 84 ntBASIC3.29□□□□□ -1.88
PF4V1P10720 AC005899.2-201ENST00000584353 90 ntBASIC3.29□□□□□ -1.88
PF4V1P10720 AL161729.3-201ENST00000603533 673 ntBASIC3.29□□□□□ -1.88
PF4V1P10720 AC126177.8-201ENST00000618339 1015 ntBASIC3.29□□□□□ -1.88
PF4V1P10720 AC008785.1-201ENST00000624475 456 ntBASIC3.29□□□□□ -1.88
PF4V1P10720 AC138915.1-201ENST00000565427 1685 ntBASIC3.29□□□□□ -1.88
PF4V1P10720 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
PF4V1P10720 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PF4V1P10720 OR56A5-201ENST00000340110 738 ntBASIC3.28□□□□□ -1.88
PF4V1P10720 AC092268.1-201ENST00000342691 405 ntBASIC3.28□□□□□ -1.88
PF4V1P10720 RNU6-212P-201ENST00000362642 104 ntBASIC3.28□□□□□ -1.88
PF4V1P10720 Y_RNA.123-201ENST00000363338 102 ntBASIC3.28□□□□□ -1.88
PF4V1P10720 RNU6-1285P-201ENST00000363480 105 ntBASIC3.28□□□□□ -1.88
PF4V1P10720 RNA5SP283-201ENST00000365604 119 ntBASIC3.28□□□□□ -1.88
PF4V1P10720 RNU1-57P-201ENST00000384491 166 ntBASIC3.28□□□□□ -1.88
PF4V1P10720 SNORD116-29-201ENST00000384516 83 ntBASIC3.28□□□□□ -1.88
PF4V1P10720 MIR134-201ENST00000385258 73 ntBASIC3.28□□□□□ -1.88
PF4V1P10720 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PF4V1P10720 USMG5P1-201ENST00000425964 177 ntBASIC3.28□□□□□ -1.88
PF4V1P10720 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.28□□□□□ -1.88
PF4V1P10720 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.28□□□□□ -1.88
PF4V1P10720 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.28□□□□□ -1.88
PF4V1P10720 AC023632.4-201ENST00000517783 191 ntBASIC3.28□□□□□ -1.88
PF4V1P10720 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.28□□□□□ -1.88
PF4V1P10720 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PF4V1P10720 HSPE1P4-201ENST00000550617 308 ntBASIC3.28□□□□□ -1.88
PF4V1P10720 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.28□□□□□ -1.88
PF4V1P10720 AC022655.2-201ENST00000577280 318 ntBASIC3.28□□□□□ -1.88
PF4V1P10720 AC103810.1-201ENST00000579873 453 ntBASIC3.28□□□□□ -1.88
PF4V1P10720 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.28□□□□□ -1.88
PF4V1P10720 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.28□□□□□ -1.88
PF4V1P10720 MIR92B-201ENST00000607575 96 ntBASIC3.28□□□□□ -1.88
PF4V1P10720 AL157817.1-201ENST00000614264 790 ntBASIC3.28□□□□□ -1.88
PF4V1P10720 AL359314.1-201ENST00000616913 261 ntBASIC3.28□□□□□ -1.88
PF4V1P10720 MIR7154-201ENST00000620673 73 ntBASIC3.28□□□□□ -1.88
PF4V1P10720 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PF4V1P10720 MTND4LP32-201ENST00000636111 270 ntBASIC3.28□□□□□ -1.88
PF4V1P10720 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.28□□□□□ -1.88
PF4V1P10720 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PF4V1P10720 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
PF4V1P10720 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PF4V1P10720 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PF4V1P10720 MIR372-201ENST00000362225 67 ntBASIC3.27□□□□□ -1.89
PF4V1P10720 Y_RNA.2-201ENST00000362330 96 ntBASIC3.27□□□□□ -1.89
PF4V1P10720 RNU6-142P-201ENST00000384019 107 ntBASIC3.27□□□□□ -1.89
PF4V1P10720 MIR186-201ENST00000384988 86 ntBASIC3.27□□□□□ -1.89
PF4V1P10720 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.27□□□□□ -1.89
PF4V1P10720 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.27□□□□□ -1.89
PF4V1P10720 AC244670.1-201ENST00000436879 112 ntBASIC3.27□□□□□ -1.89
PF4V1P10720 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.27□□□□□ -1.89
PF4V1P10720 SNRPGP7-201ENST00000469016 106 ntBASIC3.27□□□□□ -1.89
PF4V1P10720 RN7SL604P-201ENST00000492589 296 ntBASIC3.27□□□□□ -1.89
PF4V1P10720 AC104564.1-201ENST00000493028 407 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms