Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 RPL36AP48-201ENST00000485521 314 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 RPL39P36-201ENST00000490784 156 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 MTND3P3-201ENST00000505004 126 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 NDUFB4P2-201ENST00000509515 391 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.29□□□□□ -2.2
COL4A2P08572 RNU5A-4P-201ENST00000516588 111 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 RNU5B-3P-201ENST00000516601 115 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 RNU6-64P-201ENST00000517119 105 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.29□□□□□ -2.2
COL4A2P08572 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.29□□□□□ -2.2
COL4A2P08572 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.29□□□□□ -2.2
COL4A2P08572 TMF1P1-201ENST00000576058 373 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 MIR4293-201ENST00000584305 78 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.29□□□□□ -2.2
COL4A2P08572 AL391834.2-201ENST00000609982 546 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 MIR7974-201ENST00000615835 79 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 AC021755.4-201ENST00000616620 456 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 MIR6515-201ENST00000619843 57 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 AP000484.1-201ENST00000620067 1252 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.29□□□□□ -2.2
COL4A2P08572 FRG1KP-201ENST00000623592 341 ntBASIC1.29□□□□□ -2.2
COL4A2P08572 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
COL4A2P08572 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
COL4A2P08572 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.28□□□□□ -2.2
COL4A2P08572 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.28□□□□□ -2.2
COL4A2P08572 RNU6-636P-201ENST00000384598 107 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 MIR524-201ENST00000385242 87 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 AL033519.2-201ENST00000403958 392 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 RNU6-757P-201ENST00000410334 100 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 RNU6-584P-201ENST00000410350 95 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 RNU4-72P-201ENST00000410754 173 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.28□□□□□ -2.2
COL4A2P08572 AL109913.1-201ENST00000421173 514 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 AC104651.1-201ENST00000427559 735 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
COL4A2P08572 MTND5P25-201ENST00000430499 799 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.28□□□□□ -2.2
COL4A2P08572 AL117351.1-201ENST00000438864 766 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.28□□□□□ -2.2
COL4A2P08572 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
COL4A2P08572 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.28□□□□□ -2.2
COL4A2P08572 AC093899.1-201ENST00000457984 376 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 AC092991.1-201ENST00000477176 376 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
COL4A2P08572 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.28□□□□□ -2.2
COL4A2P08572 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
COL4A2P08572 MTATP6P9-201ENST00000515039 680 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 SNORA31.3-201ENST00000516029 96 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.28□□□□□ -2.2
COL4A2P08572 AC090821.2-201ENST00000523552 176 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 AL121821.2-201ENST00000556081 394 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 AL359212.1-201ENST00000556608 614 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 LINC00933-203ENST00000559812 219 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 AC109446.2-201ENST00000567872 497 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 MIR4782-201ENST00000577987 79 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 MIR4999-201ENST00000585029 91 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 AC021171.1-201ENST00000603137 706 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 AL078603.1-201ENST00000603824 313 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
COL4A2P08572 AL021997.1-201ENST00000605757 193 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 AC069294.1-201ENST00000608397 350 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 AC009974.1-201ENST00000608881 455 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 AL161423.1-201ENST00000613700 262 ntBASIC1.28□□□□□ -2.2
COL4A2P08572 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.28□□□□□ -2.2
COL4A2P08572 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
COL4A2P08572 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
COL4A2P08572 CDC27P3-201ENST00000635418 1910 ntBASIC1.27□□□□□ -2.21
COL4A2P08572 RNY1-201ENST00000364228 113 ntBASIC1.27□□□□□ -2.21
COL4A2P08572 RNY3P13-201ENST00000365542 102 ntBASIC1.27□□□□□ -2.21
COL4A2P08572 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.27□□□□□ -2.21
COL4A2P08572 RPL26P27-201ENST00000414397 437 ntBASIC1.27□□□□□ -2.21
COL4A2P08572 RPS24P7-201ENST00000416921 246 ntBASIC1.27□□□□□ -2.21
COL4A2P08572 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.27□□□□□ -2.21
COL4A2P08572 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.27□□□□□ -2.21
COL4A2P08572 RPS3AP44-201ENST00000425466 790 ntBASIC1.27□□□□□ -2.21
COL4A2P08572 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.27□□□□□ -2.21
COL4A2P08572 AL591704.1-201ENST00000432574 275 ntBASIC1.27□□□□□ -2.21
COL4A2P08572 AC004383.1-201ENST00000438135 289 ntBASIC1.27□□□□□ -2.21
COL4A2P08572 RPS15AP9-201ENST00000439856 381 ntBASIC1.27□□□□□ -2.21
COL4A2P08572 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.27□□□□□ -2.21
COL4A2P08572 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.27□□□□□ -2.21
COL4A2P08572 AC098591.2-201ENST00000510152 315 ntBASIC1.27□□□□□ -2.21
COL4A2P08572 RNU2-10P-201ENST00000516375 211 ntBASIC1.27□□□□□ -2.21
COL4A2P08572 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.27□□□□□ -2.21
COL4A2P08572 AC023050.2-201ENST00000544968 387 ntBASIC1.27□□□□□ -2.21
COL4A2P08572 MTND4P33-201ENST00000556706 766 ntBASIC1.27□□□□□ -2.21
COL4A2P08572 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.27□□□□□ -2.21
COL4A2P08572 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.27□□□□□ -2.21
COL4A2P08572 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.27□□□□□ -2.21
COL4A2P08572 AC012213.3-201ENST00000577199 777 ntBASIC1.27□□□□□ -2.21
COL4A2P08572 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.27□□□□□ -2.21
COL4A2P08572 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.27□□□□□ -2.21
COL4A2P08572 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.27□□□□□ -2.21
COL4A2P08572 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.27□□□□□ -2.21
COL4A2P08572 MIR5739-201ENST00000619803 80 ntBASIC1.27□□□□□ -2.21
COL4A2P08572 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.27□□□□□ -2.21
COL4A2P08572 AC025048.6-202ENST00000627667 438 ntBASIC1.27□□□□□ -2.21
COL4A2P08572 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.27□□□□□ -2.21
COL4A2P08572 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms