Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DOAP06340 GSTA11P-201ENST00000452866 669 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DOAP06340 RPL23AP31-201ENST00000456160 467 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DOAP06340 RNU6-953P-201ENST00000459154 107 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 AC104136.1-201ENST00000512969 394 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 SCARNA16.2-201ENST00000516520 172 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 RNU1-54P-201ENST00000517181 120 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 RNU6-1073P-201ENST00000517182 106 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 AC009812.2-201ENST00000517657 457 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 AP000889.1-201ENST00000530968 660 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 AC011494.1-201ENST00000596454 237 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DOAP06340 ELOCP5-201ENST00000604924 333 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 AL137843.1-201ENST00000605078 385 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DOAP06340 AC006157.1-201ENST00000611750 366 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 AL355810.1-201ENST00000614629 552 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DOAP06340 AL078596.1-201ENST00000624856 447 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DOAP06340 AC000403.1-201ENST00000613696 3585 ntBASIC3.69□□□□□ -1.82
HLA-DOAP06340 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DOAP06340 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DOAP06340 AL136964.1-201ENST00000622038 2990 ntBASIC3.68□□□□□ -1.82
HLA-DOAP06340 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DOAP06340 AL365361.1-201ENST00000566942 3481 ntBASIC3.68□□□□□ -1.82
HLA-DOAP06340 UBE2L2-201ENST00000254302 429 ntBASIC3.68□□□□□ -1.82
HLA-DOAP06340 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DOAP06340 SNORD3E-201ENST00000362899 217 ntBASIC3.68□□□□□ -1.82
HLA-DOAP06340 Y_RNA.151-201ENST00000363566 112 ntBASIC3.68□□□□□ -1.82
HLA-DOAP06340 RNU6-1032P-201ENST00000384100 107 ntBASIC3.68□□□□□ -1.82
HLA-DOAP06340 RNU6-196P-201ENST00000384315 107 ntBASIC3.68□□□□□ -1.82
HLA-DOAP06340 SNORA44-201ENST00000384584 132 ntBASIC3.68□□□□□ -1.82
HLA-DOAP06340 MIR548F4-201ENST00000408515 105 ntBASIC3.68□□□□□ -1.82
HLA-DOAP06340 RNU6-985P-201ENST00000410182 104 ntBASIC3.68□□□□□ -1.82
HLA-DOAP06340 RN7SKP220-201ENST00000410611 288 ntBASIC3.68□□□□□ -1.82
HLA-DOAP06340 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DOAP06340 AC243428.1-201ENST00000421099 264 ntBASIC3.68□□□□□ -1.82
HLA-DOAP06340 AL592045.1-201ENST00000429867 352 ntBASIC3.68□□□□□ -1.82
HLA-DOAP06340 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DOAP06340 AL359672.1-201ENST00000442302 409 ntBASIC3.68□□□□□ -1.82
HLA-DOAP06340 snoU13.4-201ENST00000458916 104 ntBASIC3.68□□□□□ -1.82
HLA-DOAP06340 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DOAP06340 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DOAP06340 RNU6-470P-201ENST00000515954 104 ntBASIC3.68□□□□□ -1.82
HLA-DOAP06340 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.68□□□□□ -1.82
HLA-DOAP06340 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.68□□□□□ -1.82
HLA-DOAP06340 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.68□□□□□ -1.82
HLA-DOAP06340 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DOAP06340 AL117187.1-201ENST00000555482 181 ntBASIC3.68□□□□□ -1.82
HLA-DOAP06340 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DOAP06340 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DOAP06340 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DOAP06340 AL161423.1-201ENST00000613700 262 ntBASIC3.68□□□□□ -1.82
HLA-DOAP06340 AC133104.2-201ENST00000615272 193 ntBASIC3.68□□□□□ -1.82
HLA-DOAP06340 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.68□□□□□ -1.82
HLA-DOAP06340 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DOAP06340 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DOAP06340 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DOAP06340 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.68□□□□□ -1.82
HLA-DOAP06340 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DOAP06340 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DOAP06340 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DOAP06340 SNORD62.1-201ENST00000362541 86 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 Y_RNA.80-201ENST00000362996 102 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 RNU6-593P-201ENST00000364716 112 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 Y_RNA.364-201ENST00000365532 101 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 RNU6-128P-201ENST00000383976 107 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 RNU6-1181P-201ENST00000384191 106 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 RNU6-842P-201ENST00000384269 107 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 SNORA54-201ENST00000384281 123 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 Y_RNA.485-201ENST00000384395 102 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 Y_RNA.534-201ENST00000384599 112 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 RNU6-328P-201ENST00000390887 106 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 RNU6-817P-201ENST00000391083 104 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 SNORA75.6-201ENST00000391318 127 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 HMGB3P2-201ENST00000411913 584 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 RPL7P10-201ENST00000417407 739 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 HMGB1P9-201ENST00000429856 646 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 FTH1P25-201ENST00000447665 469 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DOAP06340 HMGN1P18-201ENST00000457642 277 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 HMGB3P30-201ENST00000457863 606 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DOAP06340 AC096745.1-201ENST00000509945 370 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DOAP06340 CYCSP27-201ENST00000527643 293 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 AC008269.2-201ENST00000561915 1105 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 AC010653.1-201ENST00000571108 881 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
HLA-DOAP06340 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DOAP06340 NUTF2P8-201ENST00000604593 363 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 AC087588.2-201ENST00000617667 426 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 AL162373.1-201ENST00000620433 407 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 PLCE1P1-201ENST00000622094 305 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 Z99571.1-201ENST00000636677 394 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 AP001486.2-201ENST00000561652 5113 ntBASIC3.67□□□□□ -1.82
HLA-DOAP06340 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms