Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 MTND5P16-201ENST00000460269 1703 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.73□□□□□ -1.97
COL2A1P02458 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
COL2A1P02458 RNA5SP391-201ENST00000363456 119 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 Y_RNA.202-201ENST00000364083 110 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 SNORA33.2-201ENST00000365413 134 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 RNY3P13-201ENST00000365542 102 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 DYNLT3P1-201ENST00000378574 347 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 RNU6-225P-201ENST00000384613 103 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
COL2A1P02458 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
COL2A1P02458 RNU2-62P-201ENST00000410868 191 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 AC009161.1-201ENST00000417306 376 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 RPL31P45-201ENST00000419532 356 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 AL590233.1-201ENST00000430017 456 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 ARF4P2-201ENST00000430209 526 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.72□□□□□ -1.97
COL2A1P02458 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.72□□□□□ -1.97
COL2A1P02458 AL049734.2-201ENST00000441066 616 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 AC073415.1-201ENST00000449240 153 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.72□□□□□ -1.97
COL2A1P02458 HMGN3P1-201ENST00000453847 193 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.72□□□□□ -1.97
COL2A1P02458 Y_RNA.631-201ENST00000459607 101 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 AC108860.1-201ENST00000484521 383 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 AC090096.1-201ENST00000489168 390 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 AC055855.1-201ENST00000489563 579 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 AC034222.1-201ENST00000494052 532 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.72□□□□□ -1.97
COL2A1P02458 TMEM248P1-201ENST00000510579 951 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 RN7SKP96-201ENST00000516948 297 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.72□□□□□ -1.97
COL2A1P02458 COX6CP5-201ENST00000527162 228 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.72□□□□□ -1.97
COL2A1P02458 AC105137.2-201ENST00000569073 466 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 AC060771.1-201ENST00000582031 164 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.72□□□□□ -1.97
COL2A1P02458 AC136443.5-201ENST00000603741 370 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 AC124312.5-201ENST00000604451 268 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 APOOP1-201ENST00000604695 592 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 AL159972.1-201ENST00000625150 448 ntBASIC2.72□□□□□ -1.97
COL2A1P02458 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.72□□□□□ -1.97
COL2A1P02458 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
COL2A1P02458 AC073343.1-201ENST00000328239 651 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 RNU6-1309P-201ENST00000363305 108 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 SNORA62.1-201ENST00000364287 154 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 SNORD42.2-201ENST00000365570 69 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 RNU6-505P-201ENST00000384427 107 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 SNORA64-201ENST00000384674 134 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 MIR92A2-201ENST00000385299 75 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 MT-TR-201ENST00000387439 65 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 RNU6-1106P-201ENST00000390845 107 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 CISD1P1-201ENST00000393907 327 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 AL023807.1-201ENST00000407932 359 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 RNU6-603P-201ENST00000411403 107 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 RPL23AP36-201ENST00000413895 458 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.71□□□□□ -1.97
COL2A1P02458 PSMA6P3-201ENST00000428242 164 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 RPS3AP52-201ENST00000435639 297 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.71□□□□□ -1.97
COL2A1P02458 AC005912.1-201ENST00000495392 255 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 RNU6-1088P-201ENST00000516850 104 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.71□□□□□ -1.97
COL2A1P02458 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.71□□□□□ -1.97
COL2A1P02458 MIR3942-201ENST00000585264 109 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 AC023043.3-201ENST00000593113 385 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 AP001330.4-201ENST00000604350 154 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 AL080274.1-201ENST00000605565 220 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.71□□□□□ -1.97
COL2A1P02458 AL132822.1-201ENST00000617063 513 ntBASIC2.71□□□□□ -1.97
COL2A1P02458 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
COL2A1P02458 MTND5P33-201ENST00000571250 1450 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 CUL1P1-201ENST00000509510 2425 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.71□□□□□ -1.98
COL2A1P02458 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
COL2A1P02458 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.71□□□□□ -1.98
COL2A1P02458 Y_RNA.301-201ENST00000364990 103 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 MIR568-201ENST00000385036 95 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.71□□□□□ -1.98
COL2A1P02458 AC009414.1-201ENST00000427200 443 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 RPL7L1P10-201ENST00000427790 463 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 ERLEC1P1-201ENST00000433806 578 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 MTATP6P16-201ENST00000434543 526 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 GTF2IP13-201ENST00000438487 386 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 PRPS1P1-201ENST00000445305 876 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.71□□□□□ -1.98
COL2A1P02458 AL354710.1-201ENST00000453641 246 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 HMGN2P26-201ENST00000463169 339 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
COL2A1P02458 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.71□□□□□ -1.98
COL2A1P02458 SCARNA17.1-201ENST00000516211 143 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 SCARNA17.2-201ENST00000516334 143 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 Y_RNA.711-201ENST00000516993 102 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.71□□□□□ -1.98
COL2A1P02458 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.71□□□□□ -1.98
COL2A1P02458 LSM6P2-201ENST00000552208 177 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
COL2A1P02458 UBE2L4-201ENST00000587688 464 ntBASIC2.71□□□□□ -1.98
COL2A1P02458 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms