Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 RPL37P4-201ENST00000448908 268 ntBASIC2.58□□□□□ -2
CLDN1O95832 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.58□□□□□ -2
CLDN1O95832 RNA5SP310-201ENST00000459084 116 ntBASIC2.58□□□□□ -2
CLDN1O95832 RNU6-1208P-201ENST00000459588 107 ntBASIC2.58□□□□□ -2
CLDN1O95832 RPS26P21-201ENST00000475397 348 ntBASIC2.58□□□□□ -2
CLDN1O95832 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.58□□□□□ -2
CLDN1O95832 Y_RNA.665-201ENST00000516177 98 ntBASIC2.58□□□□□ -2
CLDN1O95832 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.58□□□□□ -2
CLDN1O95832 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.58□□□□□ -2
CLDN1O95832 MTND4P7-201ENST00000523876 130 ntBASIC2.58□□□□□ -2
CLDN1O95832 CENPUP1-201ENST00000526649 1202 ntBASIC2.58□□□□□ -2
CLDN1O95832 BNIP3P6-201ENST00000549284 499 ntBASIC2.58□□□□□ -2
CLDN1O95832 OR11H5P-201ENST00000554039 926 ntBASIC2.58□□□□□ -2
CLDN1O95832 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLDN1O95832 MIR1273C-201ENST00000578669 77 ntBASIC2.58□□□□□ -2
CLDN1O95832 SNORD53-201ENST00000579969 78 ntBASIC2.58□□□□□ -2
CLDN1O95832 AL158827.2-201ENST00000602494 330 ntBASIC2.58□□□□□ -2
CLDN1O95832 AC007938.3-201ENST00000604965 623 ntBASIC2.58□□□□□ -2
CLDN1O95832 AL158032.1-201ENST00000605401 106 ntBASIC2.58□□□□□ -2
CLDN1O95832 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.58□□□□□ -2
CLDN1O95832 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.58□□□□□ -2
CLDN1O95832 AP003400.5-201ENST00000624827 617 ntBASIC2.58□□□□□ -2
CLDN1O95832 AL691447.3-201ENST00000635020 330 ntBASIC2.58□□□□□ -2
CLDN1O95832 AL512643.1-201ENST00000635735 524 ntBASIC2.58□□□□□ -2
CLDN1O95832 U2.21-201ENST00000637295 81 ntBASIC2.58□□□□□ -2
CLDN1O95832 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.58□□□□□ -2
CLDN1O95832 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CLDN1O95832 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLDN1O95832 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLDN1O95832 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.57□□□□□ -2
CLDN1O95832 Y_RNA.72-201ENST00000362894 103 ntBASIC2.57□□□□□ -2
CLDN1O95832 SNORA14A-201ENST00000364773 135 ntBASIC2.57□□□□□ -2
CLDN1O95832 SNORA51.4-201ENST00000364993 124 ntBASIC2.57□□□□□ -2
CLDN1O95832 RNU6-715P-201ENST00000365204 103 ntBASIC2.57□□□□□ -2
CLDN1O95832 CD24P4-201ENST00000382840 243 ntBASIC2.57□□□□□ -2
CLDN1O95832 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.57□□□□□ -2
CLDN1O95832 SNORD37.1-201ENST00000390968 65 ntBASIC2.57□□□□□ -2
CLDN1O95832 RPS4XP3-201ENST00000398541 413 ntBASIC2.57□□□□□ -2
CLDN1O95832 TMEM167AP1-201ENST00000423409 219 ntBASIC2.57□□□□□ -2
CLDN1O95832 ZNF863P-201ENST00000426746 417 ntBASIC2.57□□□□□ -2
CLDN1O95832 AC092573.2-201ENST00000434546 243 ntBASIC2.57□□□□□ -2
CLDN1O95832 SNRPEP9-201ENST00000436794 238 ntBASIC2.57□□□□□ -2
CLDN1O95832 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.57□□□□□ -2
CLDN1O95832 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.57□□□□□ -2
CLDN1O95832 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.57□□□□□ -2
CLDN1O95832 RPS12P18-201ENST00000442381 270 ntBASIC2.57□□□□□ -2
CLDN1O95832 SCARNA18-201ENST00000459004 134 ntBASIC2.57□□□□□ -2
CLDN1O95832 RPL21P99-201ENST00000480369 423 ntBASIC2.57□□□□□ -2
CLDN1O95832 RPL21P93-201ENST00000480465 489 ntBASIC2.57□□□□□ -2
CLDN1O95832 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.57□□□□□ -2
CLDN1O95832 Y_RNA.654-201ENST00000497848 106 ntBASIC2.57□□□□□ -2
CLDN1O95832 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLDN1O95832 AC104136.1-201ENST00000512969 394 ntBASIC2.57□□□□□ -2
CLDN1O95832 RNU2-69P-201ENST00000516061 100 ntBASIC2.57□□□□□ -2
CLDN1O95832 AC009902.1-201ENST00000519351 183 ntBASIC2.57□□□□□ -2
CLDN1O95832 AC007536.1-201ENST00000533382 349 ntBASIC2.57□□□□□ -2
CLDN1O95832 AP002770.2-201ENST00000543613 532 ntBASIC2.57□□□□□ -2
CLDN1O95832 AC090115.3-201ENST00000553218 849 ntBASIC2.57□□□□□ -2
CLDN1O95832 LRRC37A5P-203ENST00000580181 585 ntBASIC2.57□□□□□ -2
CLDN1O95832 MIR548AC-201ENST00000585049 88 ntBASIC2.57□□□□□ -2
CLDN1O95832 AC018638.8-201ENST00000588755 281 ntBASIC2.57□□□□□ -2
CLDN1O95832 BNIP3P25-201ENST00000596023 559 ntBASIC2.57□□□□□ -2
CLDN1O95832 AC024153.1-201ENST00000603103 365 ntBASIC2.57□□□□□ -2
CLDN1O95832 AL670379.4-201ENST00000605279 254 ntBASIC2.57□□□□□ -2
CLDN1O95832 FTX_3.1-201ENST00000610451 147 ntBASIC2.57□□□□□ -2
CLDN1O95832 AL355073.2-201ENST00000612106 557 ntBASIC2.57□□□□□ -2
CLDN1O95832 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.57□□□□□ -2
CLDN1O95832 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.57□□□□□ -2
CLDN1O95832 MTND4P14-201ENST00000435799 1354 ntBASIC2.57□□□□□ -2
CLDN1O95832 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.57□□□□□ -2
CLDN1O95832 MTND5P19-201ENST00000424872 1794 ntBASIC2.56□□□□□ -2
CLDN1O95832 AC010680.1-201ENST00000590024 3590 ntBASIC2.56□□□□□ -2
CLDN1O95832 AC092435.3-201ENST00000565538 3654 ntBASIC2.56□□□□□ -2
CLDN1O95832 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.56□□□□□ -2
CLDN1O95832 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
CLDN1O95832 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CLDN1O95832 AC073325.2-201ENST00000339545 159 ntBASIC2.56□□□□□ -2
CLDN1O95832 RNU6-270P-201ENST00000364131 105 ntBASIC2.56□□□□□ -2
CLDN1O95832 RNU4-66P-201ENST00000365199 138 ntBASIC2.56□□□□□ -2
CLDN1O95832 RNU6-395P-201ENST00000365662 106 ntBASIC2.56□□□□□ -2
CLDN1O95832 RNU6-1035P-201ENST00000384477 107 ntBASIC2.56□□□□□ -2
CLDN1O95832 RNU6-140P-201ENST00000384566 108 ntBASIC2.56□□□□□ -2
CLDN1O95832 MIR578-201ENST00000384828 96 ntBASIC2.56□□□□□ -2
CLDN1O95832 FAT1P1-201ENST00000406588 507 ntBASIC2.56□□□□□ -2
CLDN1O95832 RNA5SP274-201ENST00000410484 108 ntBASIC2.56□□□□□ -2
CLDN1O95832 Y_RNA.604-201ENST00000410574 102 ntBASIC2.56□□□□□ -2
CLDN1O95832 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.56□□□□□ -2
CLDN1O95832 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.56□□□□□ -2
CLDN1O95832 BX276092.3-201ENST00000424182 230 ntBASIC2.56□□□□□ -2
CLDN1O95832 AL590664.1-201ENST00000448065 339 ntBASIC2.56□□□□□ -2
CLDN1O95832 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.56□□□□□ -2
CLDN1O95832 CECR9-201ENST00000453421 199 ntBASIC2.56□□□□□ -2
CLDN1O95832 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.56□□□□□ -2
CLDN1O95832 RPS15AP34-201ENST00000487776 387 ntBASIC2.56□□□□□ -2
CLDN1O95832 AC022493.1-201ENST00000492984 337 ntBASIC2.56□□□□□ -2
CLDN1O95832 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.56□□□□□ -2
CLDN1O95832 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.56□□□□□ -2
CLDN1O95832 AC073539.2-201ENST00000597113 165 ntBASIC2.56□□□□□ -2
CLDN1O95832 AC078899.3-201ENST00000599065 212 ntBASIC2.56□□□□□ -2
CLDN1O95832 HSPE1P7-201ENST00000604681 321 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms