Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RNU6-700P-201ENST00000391043 107 ntBASIC3.75□□□□□ -1.81
CNOT4O95628 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.75□□□□□ -1.81
CNOT4O95628 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.75□□□□□ -1.81
CNOT4O95628 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.75□□□□□ -1.81
CNOT4O95628 U8.21-201ENST00000459536 136 ntBASIC3.75□□□□□ -1.81
CNOT4O95628 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.75□□□□□ -1.81
CNOT4O95628 SNORA67.7-201ENST00000516664 135 ntBASIC3.75□□□□□ -1.81
CNOT4O95628 ATP5F1P5-201ENST00000526403 760 ntBASIC3.75□□□□□ -1.81
CNOT4O95628 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.75□□□□□ -1.81
CNOT4O95628 TVP23BP1-201ENST00000557500 617 ntBASIC3.75□□□□□ -1.81
CNOT4O95628 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.75□□□□□ -1.81
CNOT4O95628 MIR3158-1-201ENST00000583596 81 ntBASIC3.75□□□□□ -1.81
CNOT4O95628 AC009314.1-201ENST00000603871 304 ntBASIC3.75□□□□□ -1.81
CNOT4O95628 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.75□□□□□ -1.81
CNOT4O95628 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.75□□□□□ -1.81
CNOT4O95628 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CNOT4O95628 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.75□□□□□ -1.81
CNOT4O95628 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.75□□□□□ -1.81
CNOT4O95628 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
CNOT4O95628 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.75□□□□□ -1.81
CNOT4O95628 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CNOT4O95628 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
CNOT4O95628 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CNOT4O95628 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CNOT4O95628 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.75□□□□□ -1.81
CNOT4O95628 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CNOT4O95628 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
CNOT4O95628 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-212P-201ENST00000362642 104 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-37P-201ENST00000362692 107 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-1167P-201ENST00000363227 94 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-595P-201ENST00000363944 107 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-11P-201ENST00000364234 107 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-200P-201ENST00000364743 107 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-7-201ENST00000364784 107 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-8-201ENST00000365467 107 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNA5SP283-201ENST00000365604 119 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-25P-201ENST00000383873 107 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-1-201ENST00000383898 107 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-48P-201ENST00000384161 107 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-36P-201ENST00000384172 107 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-4P-201ENST00000384205 107 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-5P-201ENST00000384238 107 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-611P-201ENST00000384276 104 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-3P-201ENST00000384314 107 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-16P-201ENST00000384385 107 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-15P-201ENST00000384534 107 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-2-201ENST00000384627 107 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-29P-201ENST00000384637 107 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-9-201ENST00000384776 107 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-33P-201ENST00000384793 107 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNA5SP104-201ENST00000410989 118 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.74□□□□□ -1.81
CNOT4O95628 AL159987.2-201ENST00000432754 307 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RPEP5-201ENST00000441137 268 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 AL132838.2-201ENST00000492041 314 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 AC006499.6-201ENST00000511169 607 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-138P-201ENST00000515952 107 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.74□□□□□ -1.81
CNOT4O95628 MIR5696-201ENST00000578474 85 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 MIR4286-201ENST00000580651 93 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 AC012433.1-201ENST00000588916 398 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RNU6-6P-201ENST00000606623 107 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 MIR7702-201ENST00000621931 59 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CNOT4O95628 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.74□□□□□ -1.81
CNOT4O95628 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CNOT4O95628 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CNOT4O95628 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CNOT4O95628 AC007785.2-201ENST00000598627 1916 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CNOT4O95628 MTND5P9-201ENST00000503854 1755 ntBASIC3.74□□□□□ -1.81
CNOT4O95628 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CNOT4O95628 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CNOT4O95628 MIR372-201ENST00000362225 67 ntBASIC3.73□□□□□ -1.81
CNOT4O95628 RNU1-76P-201ENST00000362903 159 ntBASIC3.73□□□□□ -1.81
CNOT4O95628 Y_RNA.183-201ENST00000363882 113 ntBASIC3.73□□□□□ -1.81
CNOT4O95628 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CNOT4O95628 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CNOT4O95628 SNORD66.1-201ENST00000391230 76 ntBASIC3.73□□□□□ -1.81
CNOT4O95628 RNA5SP36-201ENST00000410197 133 ntBASIC3.73□□□□□ -1.81
CNOT4O95628 Y_RNA.592-201ENST00000410274 109 ntBASIC3.73□□□□□ -1.81
CNOT4O95628 RNU6-1025P-201ENST00000410629 104 ntBASIC3.73□□□□□ -1.81
CNOT4O95628 AL590135.1-201ENST00000422215 156 ntBASIC3.73□□□□□ -1.81
CNOT4O95628 AL158156.1-201ENST00000422509 473 ntBASIC3.73□□□□□ -1.81
CNOT4O95628 AC087650.1-201ENST00000431445 468 ntBASIC3.73□□□□□ -1.81
CNOT4O95628 MTND5P15-201ENST00000434246 349 ntBASIC3.73□□□□□ -1.81
CNOT4O95628 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.73□□□□□ -1.81
CNOT4O95628 PIGFP3-201ENST00000441918 722 ntBASIC3.73□□□□□ -1.81
CNOT4O95628 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.73□□□□□ -1.81
CNOT4O95628 snoU13.22-201ENST00000459428 104 ntBASIC3.73□□□□□ -1.81
CNOT4O95628 RN7SL542P-201ENST00000467147 294 ntBASIC3.73□□□□□ -1.81
CNOT4O95628 RN7SL330P-201ENST00000469709 307 ntBASIC3.73□□□□□ -1.81
CNOT4O95628 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
CNOT4O95628 AC025445.1-201ENST00000502728 300 ntBASIC3.73□□□□□ -1.81
CNOT4O95628 RNA5SP519-201ENST00000516480 119 ntBASIC3.73□□□□□ -1.81
CNOT4O95628 RNU6-111P-201ENST00000517179 105 ntBASIC3.73□□□□□ -1.81
CNOT4O95628 RNU1-45P-201ENST00000517191 141 ntBASIC3.73□□□□□ -1.81
CNOT4O95628 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.73□□□□□ -1.81
CNOT4O95628 IGLV3-26-201ENST00000520756 302 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms