Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AL139415.2-201ENST00000431968 163 ntBASIC1.97□□□□□ -2.09
CLDN9O95484 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.97□□□□□ -2.09
CLDN9O95484 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CLDN9O95484 AC016691.1-201ENST00000441321 413 ntBASIC1.97□□□□□ -2.09
CLDN9O95484 AL161788.1-201ENST00000441805 169 ntBASIC1.97□□□□□ -2.09
CLDN9O95484 AC012308.1-201ENST00000451232 178 ntBASIC1.97□□□□□ -2.09
CLDN9O95484 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.97□□□□□ -2.09
CLDN9O95484 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.97□□□□□ -2.09
CLDN9O95484 RPL7P43-201ENST00000478876 753 ntBASIC1.97□□□□□ -2.09
CLDN9O95484 AC022493.1-201ENST00000492984 337 ntBASIC1.97□□□□□ -2.09
CLDN9O95484 AC117522.2-201ENST00000510049 657 ntBASIC1.97□□□□□ -2.09
CLDN9O95484 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CLDN9O95484 CYCSP26-201ENST00000534107 320 ntBASIC1.97□□□□□ -2.09
CLDN9O95484 PSMA3P-201ENST00000555485 635 ntBASIC1.97□□□□□ -2.09
CLDN9O95484 DEFB131E-202ENST00000602581 683 ntBASIC1.97□□□□□ -2.09
CLDN9O95484 AC025165.5-201ENST00000602802 578 ntBASIC1.97□□□□□ -2.09
CLDN9O95484 AL713866.2-201ENST00000603579 219 ntBASIC1.97□□□□□ -2.09
CLDN9O95484 AL022154.1-201ENST00000604698 785 ntBASIC1.97□□□□□ -2.09
CLDN9O95484 AC093788.1-201ENST00000609356 927 ntBASIC1.97□□□□□ -2.09
CLDN9O95484 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.97□□□□□ -2.09
CLDN9O95484 MIR7844-201ENST00000616161 122 ntBASIC1.97□□□□□ -2.09
CLDN9O95484 AP003400.5-201ENST00000624827 617 ntBASIC1.97□□□□□ -2.09
CLDN9O95484 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.96□□□□□ -2.09
CLDN9O95484 RBBP8P1-201ENST00000449447 1844 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CLDN9O95484 MIR412-201ENST00000362142 91 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 RNU5E-1-201ENST00000362477 120 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 RNU4-52P-201ENST00000384209 138 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 CISD1P1-201ENST00000393907 327 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 U3.40-201ENST00000408706 208 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 RN7SKP32-201ENST00000410167 303 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 RNU6-1140P-201ENST00000410517 106 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.96□□□□□ -2.1
CLDN9O95484 AL589872.1-201ENST00000426602 288 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.96□□□□□ -2.1
CLDN9O95484 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.96□□□□□ -2.1
CLDN9O95484 EPS15P1-201ENST00000448836 336 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 USP9YP12-201ENST00000450481 570 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CLDN9O95484 snoU109.2-201ENST00000459316 135 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 MTCO2P29-201ENST00000465212 189 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.96□□□□□ -2.1
CLDN9O95484 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.96□□□□□ -2.1
CLDN9O95484 AC108078.2-201ENST00000510750 236 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 AC112206.3-201ENST00000514578 389 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 RNU6-123P-201ENST00000516163 102 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 AP001372.4-201ENST00000524889 472 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 ADI1P3-201ENST00000549509 470 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 MIR1273D-201ENST00000577266 86 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
CLDN9O95484 BNIP3P30-201ENST00000601184 574 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 AC022022.2-201ENST00000602989 360 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 AC018638.7-201ENST00000605836 1114 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 AC096772.1-201ENST00000609146 564 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 AC004223.4-201ENST00000612426 332 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 AC012409.4-201ENST00000612923 249 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 AL353997.5-201ENST00000618886 171 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 MIR219B-201ENST00000637023 88 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 AP000553.5-201ENST00000641933 54 ntBASIC1.96□□□□□ -2.1
CLDN9O95484 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CLDN9O95484 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CLDN9O95484 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CLDN9O95484 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CLDN9O95484 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CLDN9O95484 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CLDN9O95484 Y_RNA.40-201ENST00000362645 93 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 SNORD114-19-201ENST00000363072 75 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 RNA5SP99-201ENST00000364020 114 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 RNA5SP138-201ENST00000365098 114 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 RNU5E-5P-201ENST00000365379 116 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 RNU6-641P-201ENST00000384006 107 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 RNU6-1032P-201ENST00000384100 107 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CLDN9O95484 MIR764-201ENST00000390811 85 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CLDN9O95484 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CLDN9O95484 AL023284.1-201ENST00000403956 276 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 AC127391.1-201ENST00000411737 98 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 AL139156.1-201ENST00000412785 841 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 EDDM3CP-201ENST00000415977 425 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 AC114491.1-201ENST00000416095 246 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 XKRYP1-201ENST00000423438 492 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 AIMP1P2-201ENST00000425294 312 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.95□□□□□ -2.1
CLDN9O95484 XKRYP2-201ENST00000432915 492 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 RPS24P1-201ENST00000438550 371 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 USP9YP15-201ENST00000442391 422 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 AC117503.1-201ENST00000472241 394 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 RPS27P21-201ENST00000486977 252 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.95□□□□□ -2.1
CLDN9O95484 SNORA4.4-201ENST00000515921 135 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 MIR514B-201ENST00000516774 80 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.95□□□□□ -2.1
CLDN9O95484 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.95□□□□□ -2.1
CLDN9O95484 OR5AQ1P-201ENST00000527596 927 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 FAM92A1P1-201ENST00000528023 890 ntBASIC1.95□□□□□ -2.1
CLDN9O95484 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.95□□□□□ -2.1
CLDN9O95484 AC136619.2-201ENST00000563361 631 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms