Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 GPM6BP2-201ENST00000432046 144 ntBASIC0.64□□□□□ -2.31
ABCA1O95477 GPM6BP1-201ENST00000446387 144 ntBASIC0.64□□□□□ -2.31
ABCA1O95477 OR2A41P-201ENST00000473586 105 ntBASIC0.64□□□□□ -2.31
ABCA1O95477 AL160314.1-201ENST00000490836 438 ntBASIC0.64□□□□□ -2.31
ABCA1O95477 AC091860.1-201ENST00000505723 432 ntBASIC0.64□□□□□ -2.31
ABCA1O95477 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.64□□□□□ -2.31
ABCA1O95477 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.64□□□□□ -2.31
ABCA1O95477 SNORA48.9-201ENST00000516419 162 ntBASIC0.64□□□□□ -2.31
ABCA1O95477 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.64□□□□□ -2.31
ABCA1O95477 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.64□□□□□ -2.31
ABCA1O95477 AC138915.2-201ENST00000569776 97 ntBASIC0.64□□□□□ -2.31
ABCA1O95477 MIR4698-201ENST00000577795 80 ntBASIC0.64□□□□□ -2.31
ABCA1O95477 AC091057.3-201ENST00000602684 733 ntBASIC0.64□□□□□ -2.31
ABCA1O95477 MIR8087-201ENST00000612745 78 ntBASIC0.64□□□□□ -2.31
ABCA1O95477 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.64□□□□□ -2.31
ABCA1O95477 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.64□□□□□ -2.31
ABCA1O95477 RNU6-657P-201ENST00000383904 107 ntBASIC0.63□□□□□ -2.31
ABCA1O95477 RPL39P6-201ENST00000448289 150 ntBASIC0.63□□□□□ -2.31
ABCA1O95477 RNU7-59P-201ENST00000459101 61 ntBASIC0.63□□□□□ -2.31
ABCA1O95477 AC026410.2-201ENST00000460281 156 ntBASIC0.63□□□□□ -2.31
ABCA1O95477 RPL9P9-202ENST00000466501 579 ntBASIC0.63□□□□□ -2.31
ABCA1O95477 AC117454.1-201ENST00000491120 168 ntBASIC0.63□□□□□ -2.31
ABCA1O95477 TPT1P8-201ENST00000510120 555 ntBASIC0.63□□□□□ -2.31
ABCA1O95477 AC110760.3-202ENST00000515177 371 ntBASIC0.63□□□□□ -2.31
ABCA1O95477 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
ABCA1O95477 AC012414.2-201ENST00000559474 187 ntBASIC0.63□□□□□ -2.31
ABCA1O95477 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.63□□□□□ -2.31
ABCA1O95477 AC005786.1-201ENST00000588553 154 ntBASIC0.63□□□□□ -2.31
ABCA1O95477 BBIP1P1-201ENST00000602999 279 ntBASIC0.63□□□□□ -2.31
ABCA1O95477 AC009229.3-201ENST00000608056 282 ntBASIC0.63□□□□□ -2.31
ABCA1O95477 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
ABCA1O95477 FARSBP1-201ENST00000435808 1778 ntBASIC0.63□□□□□ -2.31
ABCA1O95477 Y_RNA.245-201ENST00000364493 95 ntBASIC0.63□□□□□ -2.31
ABCA1O95477 MIR16-1-201ENST00000385271 89 ntBASIC0.63□□□□□ -2.31
ABCA1O95477 AC138623.1-201ENST00000418060 216 ntBASIC0.63□□□□□ -2.31
ABCA1O95477 MTND2P24-201ENST00000453434 806 ntBASIC0.63□□□□□ -2.31
ABCA1O95477 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.63□□□□□ -2.31
ABCA1O95477 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.63□□□□□ -2.31
ABCA1O95477 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.63□□□□□ -2.31
ABCA1O95477 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.63□□□□□ -2.31
ABCA1O95477 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.63□□□□□ -2.31
ABCA1O95477 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.63□□□□□ -2.31
ABCA1O95477 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.63□□□□□ -2.31
ABCA1O95477 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.63□□□□□ -2.31
ABCA1O95477 RMST_10.1-201ENST00000616309 154 ntBASIC0.63□□□□□ -2.31
ABCA1O95477 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
ABCA1O95477 RNU6-359P-201ENST00000365466 108 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 Y_RNA.548-201ENST00000384656 105 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
ABCA1O95477 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
ABCA1O95477 AL591034.2-201ENST00000402839 359 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 MIR1267-201ENST00000408723 78 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 AC244453.4-201ENST00000419150 388 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 AC246680.2-201ENST00000422106 389 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 AC244035.1-201ENST00000430042 390 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.62□□□□□ -2.31
ABCA1O95477 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.62□□□□□ -2.31
ABCA1O95477 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.62□□□□□ -2.31
ABCA1O95477 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.62□□□□□ -2.31
ABCA1O95477 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.62□□□□□ -2.31
ABCA1O95477 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.62□□□□□ -2.31
ABCA1O95477 AC005832.3-201ENST00000537929 631 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 AC136619.2-201ENST00000563361 631 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.62□□□□□ -2.31
ABCA1O95477 AL118556.2-201ENST00000614375 824 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 AC013476.2-201ENST00000614456 459 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 MIR6086-201ENST00000638065 55 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 MIR6866-201ENST00000638146 69 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.62□□□□□ -2.31
ABCA1O95477 RNU5E-8P-201ENST00000363502 116 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 RNU6-115P-201ENST00000364310 107 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 MIR30A-201ENST00000385092 71 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 FTH1P12-201ENST00000432137 551 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.62□□□□□ -2.31
ABCA1O95477 MTND2P6-201ENST00000455337 1030 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.62□□□□□ -2.31
ABCA1O95477 AL441985.1-201ENST00000457727 251 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 AC139453.3-201ENST00000493276 369 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.62□□□□□ -2.31
ABCA1O95477 RNU5B-3P-201ENST00000516601 115 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 RNU6-840P-201ENST00000517275 65 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 AC011451.2-201ENST00000604303 598 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 AL390208.1-201ENST00000605885 644 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 MIR1264-201ENST00000616374 69 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 AC009268.2-201ENST00000621925 457 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 AC090517.3-201ENST00000625170 141 ntBASIC0.62□□□□□ -2.31
ABCA1O95477 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
ABCA1O95477 RNA5SP511-201ENST00000410487 115 ntBASIC0.61□□□□□ -2.31
ABCA1O95477 MTND4LP14-201ENST00000429447 288 ntBASIC0.61□□□□□ -2.31
ABCA1O95477 AC092427.1-201ENST00000439177 601 ntBASIC0.61□□□□□ -2.31
ABCA1O95477 MEMO1P3-201ENST00000459811 302 ntBASIC0.61□□□□□ -2.31
ABCA1O95477 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.61□□□□□ -2.31
ABCA1O95477 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.61□□□□□ -2.31
ABCA1O95477 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.61□□□□□ -2.31
ABCA1O95477 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.61□□□□□ -2.31
ABCA1O95477 AC084824.4-201ENST00000620106 731 ntBASIC0.61□□□□□ -2.31
ABCA1O95477 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.61□□□□□ -2.31
ABCA1O95477 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.61□□□□□ -2.31
ABCA1O95477 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms