Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 AC104260.1-201ENST00000616660 539 ntBASIC3.92□□□□□ -1.78
CLSTN1O94985 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.92□□□□□ -1.78
CLSTN1O94985 AL034408.1-202ENST00000636088 415 ntBASIC3.92□□□□□ -1.78
CLSTN1O94985 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.92□□□□□ -1.78
CLSTN1O94985 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLSTN1O94985 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLSTN1O94985 MTND4P12-201ENST00000498999 1377 ntBASIC3.91□□□□□ -1.78
CLSTN1O94985 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLSTN1O94985 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.91□□□□□ -1.78
CLSTN1O94985 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CLSTN1O94985 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.91□□□□□ -1.78
CLSTN1O94985 RNU1-75P-201ENST00000347264 129 ntBASIC3.91□□□□□ -1.78
CLSTN1O94985 RNU6-867P-201ENST00000364956 107 ntBASIC3.91□□□□□ -1.78
CLSTN1O94985 SNORD116-11-201ENST00000383882 92 ntBASIC3.91□□□□□ -1.78
CLSTN1O94985 AL122016.1-201ENST00000403365 367 ntBASIC3.91□□□□□ -1.78
CLSTN1O94985 RN7SKP32-201ENST00000410167 303 ntBASIC3.91□□□□□ -1.78
CLSTN1O94985 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLSTN1O94985 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.91□□□□□ -1.78
CLSTN1O94985 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.91□□□□□ -1.78
CLSTN1O94985 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLSTN1O94985 AC103851.1-201ENST00000506833 274 ntBASIC3.91□□□□□ -1.78
CLSTN1O94985 MTCYBP40-201ENST00000509390 1135 ntBASIC3.91□□□□□ -1.78
CLSTN1O94985 RPL39P5-202ENST00000512505 151 ntBASIC3.91□□□□□ -1.78
CLSTN1O94985 RNU6-875P-201ENST00000516488 106 ntBASIC3.91□□□□□ -1.78
CLSTN1O94985 RNU6-566P-201ENST00000516790 107 ntBASIC3.91□□□□□ -1.78
CLSTN1O94985 Y_RNA.702-201ENST00000516843 96 ntBASIC3.91□□□□□ -1.78
CLSTN1O94985 AC007991.1-201ENST00000522680 631 ntBASIC3.91□□□□□ -1.78
CLSTN1O94985 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLSTN1O94985 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.91□□□□□ -1.78
CLSTN1O94985 CR383656.8-201ENST00000549046 145 ntBASIC3.91□□□□□ -1.78
CLSTN1O94985 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.91□□□□□ -1.78
CLSTN1O94985 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.91□□□□□ -1.78
CLSTN1O94985 AL391813.1-201ENST00000603098 260 ntBASIC3.91□□□□□ -1.78
CLSTN1O94985 AC009994.1-201ENST00000606889 253 ntBASIC3.91□□□□□ -1.78
CLSTN1O94985 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLSTN1O94985 AC073073.2-201ENST00000609827 2578 ntBASIC3.91□□□□□ -1.78
CLSTN1O94985 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.9□□□□□ -1.78
CLSTN1O94985 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CLSTN1O94985 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CLSTN1O94985 Y_RNA.604-201ENST00000410574 102 ntBASIC3.9□□□□□ -1.79
CLSTN1O94985 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.9□□□□□ -1.79
CLSTN1O94985 AMD1P1-201ENST00000457220 922 ntBASIC3.9□□□□□ -1.79
CLSTN1O94985 SNORA84-201ENST00000459229 133 ntBASIC3.9□□□□□ -1.79
CLSTN1O94985 MED28P2-201ENST00000475771 317 ntBASIC3.9□□□□□ -1.79
CLSTN1O94985 AC021205.2-201ENST00000480069 347 ntBASIC3.9□□□□□ -1.79
CLSTN1O94985 RPL23AP49-201ENST00000492925 468 ntBASIC3.9□□□□□ -1.79
CLSTN1O94985 AK3P2-201ENST00000507976 429 ntBASIC3.9□□□□□ -1.79
CLSTN1O94985 AC008526.1-201ENST00000509149 338 ntBASIC3.9□□□□□ -1.79
CLSTN1O94985 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.9□□□□□ -1.79
CLSTN1O94985 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.9□□□□□ -1.79
CLSTN1O94985 AC138761.3-201ENST00000579993 334 ntBASIC3.9□□□□□ -1.79
CLSTN1O94985 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.9□□□□□ -1.79
CLSTN1O94985 AC011471.1-201ENST00000585766 187 ntBASIC3.9□□□□□ -1.79
CLSTN1O94985 AC023043.2-201ENST00000589678 1026 ntBASIC3.9□□□□□ -1.79
CLSTN1O94985 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.9□□□□□ -1.79
CLSTN1O94985 uc_338.15-201ENST00000615470 191 ntBASIC3.9□□□□□ -1.79
CLSTN1O94985 AL355365.1-201ENST00000616480 294 ntBASIC3.9□□□□□ -1.79
CLSTN1O94985 U4.6-201ENST00000621618 127 ntBASIC3.9□□□□□ -1.79
CLSTN1O94985 AC034229.5-201ENST00000624258 185 ntBASIC3.9□□□□□ -1.79
CLSTN1O94985 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.9□□□□□ -1.79
CLSTN1O94985 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLSTN1O94985 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLSTN1O94985 AC007823.1-201ENST00000569932 1566 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CLSTN1O94985 RNU6-562P-201ENST00000362731 107 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 SNORD56.1-201ENST00000362913 68 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 Y_RNA.184-201ENST00000363884 108 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 RNA5SP51-201ENST00000364750 119 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 RNU1-109P-201ENST00000383960 147 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 SNORA5A-201ENST00000384111 134 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 PTMAP2-201ENST00000397627 327 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 RPS29P4-201ENST00000414733 161 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 AL117339.3-201ENST00000418733 162 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 AL365400.1-201ENST00000431854 640 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 MTCO2P3-201ENST00000442543 421 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 MRPL50P4-201ENST00000446432 475 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 AL133547.1-201ENST00000448546 220 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.89□□□□□ -1.79
CLSTN1O94985 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.89□□□□□ -1.79
CLSTN1O94985 RPL23AP70-201ENST00000483361 460 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.89□□□□□ -1.79
CLSTN1O94985 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 SCARNA17.1-201ENST00000516211 143 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 SCARNA17.2-201ENST00000516334 143 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 RPPH1-2P-201ENST00000516688 293 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 AC109479.2-201ENST00000517842 174 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 AP006245.1-201ENST00000522549 120 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 AC005668.1-201ENST00000571142 476 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 SCARNA17.4-201ENST00000614296 143 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 AL732372.2-225ENST00000642124 456 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CLSTN1O94985 MTND5P1-201ENST00000445440 1375 ntBASIC3.89□□□□□ -1.79
CLSTN1O94985 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLSTN1O94985 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLSTN1O94985 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.88□□□□□ -1.79
CLSTN1O94985 RNA5SP42-201ENST00000364278 115 ntBASIC3.88□□□□□ -1.79
CLSTN1O94985 RNU6-336P-201ENST00000364891 107 ntBASIC3.88□□□□□ -1.79
CLSTN1O94985 RNU6-805P-201ENST00000365643 106 ntBASIC3.88□□□□□ -1.79
CLSTN1O94985 AP002088.1-201ENST00000382740 395 ntBASIC3.88□□□□□ -1.79
CLSTN1O94985 RNU6-128P-201ENST00000383976 107 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms